RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 EHHADHQ08426 723 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 GRB10Q13322 594 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 LETM2Q2VYF4 491 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 CFAP221Q4G0U5 840 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 SOGA3Q5TF21 947 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 ICE2Q659A1 982 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 LRRC55Q6ZSA7 311 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 SPATS2Q86XZ4 545 aaKnown RBP14.66□□□□□ -0.06
VRK3-209ENST00000594948 CD302Q8IX05 232 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 GDAP1L1Q96MZ0 367 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 MTMR9Q96QG7 549 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 RUFY1Q96T51 708 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 TSG101Q99816 390 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 TLR10Q9BXR5 811 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 NYXQ9GZU5 481 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 GDF3Q9NR23 364 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 BLOC1S4Q9NUP1 217 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 ZEB2O60315 1214 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 BAG3O95817 575 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 PDIA5Q14554 519 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 EZH2Q15910 746 aaKnown RBP14.66□□□□□ -0.06
VRK3-209ENST00000594948 KLHDC7AQ5VTJ3 777 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 NFRKBQ6P4R8 1299 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 RRAGAQ7L523 313 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 SUGP1Q8IWZ8 645 aaKnown RBP14.66□□□□□ -0.06
VRK3-209ENST00000594948 WDR66Q8TBY9 1149 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 HDAC7Q8WUI4 952 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.66□□□□□ -0.06
VRK3-209ENST00000594948 RRP36Q96EU6 259 aaKnown RBP14.66□□□□□ -0.06
VRK3-209ENST00000594948 PNMA5Q96PV4 448 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 RAB34Q9BZG1 259 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 MMRN2Q9H8L6 949 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 SLC39A2Q9NP94 309 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 CEP72Q9P209 647 aa14.66□□□□□ -0.06
VRK3-209ENST00000594948 MYH4Q9Y623 1939 aa14.65□□□□□ -0.06
VRK3-209ENST00000594948 SNED1Q8TER0 1413 aa14.65□□□□□ -0.06
VRK3-209ENST00000594948 USP17L3A6NCW0 530 aa14.65□□□□□ -0.06
VRK3-209ENST00000594948 USP17L4A6NCW7 530 aa14.65□□□□□ -0.06
VRK3-209ENST00000594948 MYMKA6NI61 221 aa14.65□□□□□ -0.06
VRK3-209ENST00000594948 SRRM3A6NNA2 597 aaPredicted RBP14.65□□□□□ -0.06
VRK3-209ENST00000594948 EPHB6O15197 1021 aa14.65□□□□□ -0.06
VRK3-209ENST00000594948 RASA1P20936 1047 aa14.65□□□□□ -0.06
VRK3-209ENST00000594948 TECP42680 631 aa14.65□□□□□ -0.06
VRK3-209ENST00000594948 GNGT1P63211 74 aa14.65□□□□□ -0.06
VRK3-209ENST00000594948 TMEM266Q2M3C6 531 aa14.65□□□□□ -0.06
VRK3-209ENST00000594948 USP17L1Q7RTZ2 530 aa14.65□□□□□ -0.06
VRK3-209ENST00000594948 POTEDQ86YR6 584 aa14.65□□□□□ -0.06
VRK3-209ENST00000594948 EIF1ADQ8N9N8 165 aaKnown RBP14.65□□□□□ -0.06
VRK3-209ENST00000594948 LARP4BQ92615 738 aaKnown RBP14.65□□□□□ -0.06
VRK3-209ENST00000594948 FAM207AQ9NSI2 230 aaPredicted RBP14.65□□□□□ -0.06
VRK3-209ENST00000594948 CES2O00748 559 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 SERPING1P05155 500 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 LDHCP07864 332 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 NOVP48745 357 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 PAK2Q13177 524 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 HGSNATQ68CP4 663 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 TSEN2Q8NCE0 465 aaKnown RBP14.64□□□□□ -0.07
VRK3-209ENST00000594948 NEDD1Q8NHV4 660 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 RAD54LQ92698 747 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 ZBTB9Q96C00 473 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 DYNLL2Q96FJ2 89 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 PAGR1Q9BTK6 254 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 SEC63Q9UGP8 760 aaKnown RBP14.64□□□□□ -0.07
VRK3-209ENST00000594948 LDHBP07195 334 aaKnown RBP14.64□□□□□ -0.07
VRK3-209ENST00000594948 CCT5P48643 541 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 DDB1Q16531 1140 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 SLC9C1Q4G0N8 1177 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 TMEM119Q4V9L6 283 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 TTMPQ5BVD1 217 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 KDM7AQ6ZMT4 941 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 B4GALNT4Q76KP1 1039 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 CACNA2D4Q7Z3S7 1137 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 REXO1Q8N1G1 1221 aaKnown RBP14.64□□□□□ -0.07
VRK3-209ENST00000594948 BCAS4Q8TDM0 211 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 TBCKQ8TEA7 893 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 SH3RF3Q8TEJ3 882 aaPredicted RBP14.64□□□□□ -0.07
VRK3-209ENST00000594948 ZFP91Q96JP5 570 aaPredicted RBP14.64□□□□□ -0.07
VRK3-209ENST00000594948 CEP63Q96MT8 703 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 NLRP3Q96P20 1036 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 TFCP2L1Q9NZI6 479 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 FAM169AQ9Y6X4 670 aa14.64□□□□□ -0.07
VRK3-209ENST00000594948 BTNL10A8MVZ5 291 aa14.63□□□□□ -0.07
VRK3-209ENST00000594948 NKRFO15226 690 aaKnown RBP eCLIP14.63□□□□□ -0.07
VRK3-209ENST00000594948 SLC26A4O43511 780 aa14.63□□□□□ -0.07
VRK3-209ENST00000594948 GNA14O95837 355 aa14.63□□□□□ -0.07
VRK3-209ENST00000594948 MARSP56192 900 aaKnown RBP14.63□□□□□ -0.07
VRK3-209ENST00000594948 NAB2Q15742 525 aa14.63□□□□□ -0.07
VRK3-209ENST00000594948 CALCRLQ16602 461 aa14.63□□□□□ -0.07
VRK3-209ENST00000594948 ZCWPW2Q504Y3 356 aa14.63□□□□□ -0.07
VRK3-209ENST00000594948 IQCKQ8N0W5 287 aa14.63□□□□□ -0.07
VRK3-209ENST00000594948 WHAMMQ8TF30 809 aa14.63□□□□□ -0.07
VRK3-209ENST00000594948 MTMR8Q96EF0 704 aa14.63□□□□□ -0.07
VRK3-209ENST00000594948 CDK5RAP3Q96JB5 506 aa14.63□□□□□ -0.07
VRK3-209ENST00000594948 DRC1Q96MC2 740 aa14.63□□□□□ -0.07
VRK3-209ENST00000594948 PLEKHA4Q9H4M7 779 aa14.63□□□□□ -0.07
VRK3-209ENST00000594948 RBM12Q9NTZ6 932 aaKnown RBP14.63□□□□□ -0.07
VRK3-209ENST00000594948 PCDHGC5Q9Y5F6 944 aa14.63□□□□□ -0.07
VRK3-209ENST00000594948 ARFGEF1Q9Y6D6 1849 aa14.63□□□□□ -0.07
VRK3-209ENST00000594948 AHDC1Q5TGY3 1603 aaPredicted RBP14.62□□□□□ -0.07
VRK3-209ENST00000594948 SLC7A5Q01650 507 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms