RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 RASSF7Q02833 373 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 NONOQ15233 471 aaKnown RBP eCLIP17.14■□□□□ 0.33
PNKP-204ENST00000594661 ARL6IP4Q66PJ3 421 aaKnown RBP17.14■□□□□ 0.33
PNKP-204ENST00000594661 GBP6Q6ZN66 633 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 KIFC2Q96AC6 838 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 ANKZF1Q9H8Y5 726 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 F5H6K3 240 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 ZBTB5O15062 677 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 SERPINC1P01008 464 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 SCP2P22307 547 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 ADCY7P51828 1080 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 KLRC3Q07444 240 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 MORC3Q14149 939 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 HSP90B2PQ58FF3 399 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 FKBP1CQ5VVH2 108 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 POTEDQ86YR6 584 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 TRIML1Q8N9V2 468 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 NUP88Q99567 741 aaPredicted RBP17.14■□□□□ 0.33
PNKP-204ENST00000594661 MYOZ2Q9NPC6 264 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 FANCLQ9NW38 375 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 DACH1Q9UI36 760 aa17.14■□□□□ 0.33
PNKP-204ENST00000594661 A0A1W2PRG0 241 aa17.13■□□□□ 0.33
PNKP-204ENST00000594661 NDUFB10O96000 172 aa17.13■□□□□ 0.33
PNKP-204ENST00000594661 AFMP43652 599 aa17.13■□□□□ 0.33
PNKP-204ENST00000594661 LIG3P49916 1009 aa17.13■□□□□ 0.33
PNKP-204ENST00000594661 PRELPP51888 382 aa17.13■□□□□ 0.33
PNKP-204ENST00000594661 TUBB4BP68371 445 aa17.13■□□□□ 0.33
PNKP-204ENST00000594661 PRPF38AQ8NAV1 312 aaKnown RBP17.13■□□□□ 0.33
PNKP-204ENST00000594661 MLKLQ8NB16 471 aa17.13■□□□□ 0.33
PNKP-204ENST00000594661 GMCL1P1Q8NEA9 526 aa17.13■□□□□ 0.33
PNKP-204ENST00000594661 GIMAP7Q8NHV1 300 aa17.13■□□□□ 0.33
PNKP-204ENST00000594661 WDR24Q96S15 920 aa17.13■□□□□ 0.33
PNKP-204ENST00000594661 FAM204AQ9H8W3 233 aa17.13■□□□□ 0.33
PNKP-204ENST00000594661 SCAF8Q9UPN6 1271 aaKnown RBP17.13■□□□□ 0.33
PNKP-204ENST00000594661 EGFRP00533 1210 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 UBASH3AP57075 661 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 NEDD9Q14511 834 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 LETM2Q2VYF4 491 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 PPP1R18Q6NYC8 613 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 TBCKQ8TEA7 893 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 PLEKHA4Q9H4M7 779 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 MCM8Q9UJA3 840 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 KLHL33A6NCF5 533 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 CBFA2T2O43439 604 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 MYO1BO43795 1136 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 ERCC3P19447 782 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 ELF1P32519 619 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 SETQ01105 290 aaPredicted RBP17.12■□□□□ 0.33
PNKP-204ENST00000594661 TNIP1Q15025 636 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 FBXW10Q5XX13 1052 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 NEK8Q86SG6 692 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 FAM83AQ86UY5 434 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 NLGN2Q8NFZ4 835 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 SPATA20Q8TB22 786 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 PAGE5Q96GU1 130 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 ACBD3Q9H3P7 528 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 PGAP2Q9UHJ9 254 aa17.12■□□□□ 0.33
PNKP-204ENST00000594661 CCNT1O60563 726 aaKnown RBP17.11■□□□□ 0.33
PNKP-204ENST00000594661 SHOX2O60902 331 aaPredicted RBP17.11■□□□□ 0.33
PNKP-204ENST00000594661 CDC25AP30304 524 aa17.11■□□□□ 0.33
PNKP-204ENST00000594661 LONP1P36776 959 aaKnown RBP17.11■□□□□ 0.33
PNKP-204ENST00000594661 ECE1P42892 770 aa17.11■□□□□ 0.33
PNKP-204ENST00000594661 UBE2SQ16763 222 aa17.11■□□□□ 0.33
PNKP-204ENST00000594661 QRICH1Q2TAL8 776 aa17.11■□□□□ 0.33
PNKP-204ENST00000594661 MIGA2Q7L4E1 593 aa17.11■□□□□ 0.33
PNKP-204ENST00000594661 SRGAP1Q7Z6B7 1085 aa17.11■□□□□ 0.33
PNKP-204ENST00000594661 GMCL1Q96IK5 515 aa17.11■□□□□ 0.33
PNKP-204ENST00000594661 RIC8AQ9NPQ8 531 aa17.11■□□□□ 0.33
PNKP-204ENST00000594661 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.11■□□□□ 0.33
PNKP-204ENST00000594661 PPP2R2CQ9Y2T4 447 aa17.11■□□□□ 0.33
PNKP-204ENST00000594661 GNG11P61952 73 aa17.11■□□□□ 0.33
PNKP-204ENST00000594661 FMR1Q06787 632 aaKnown RBP eCLIP17.11■□□□□ 0.33
PNKP-204ENST00000594661 CASP8Q14790 479 aa17.11■□□□□ 0.33
PNKP-204ENST00000594661 SH3RF1Q7Z6J0 888 aa17.11■□□□□ 0.33
PNKP-204ENST00000594661 DPF2Q92785 391 aa17.11■□□□□ 0.33
PNKP-204ENST00000594661 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.33
PNKP-204ENST00000594661 LTBP3Q9NS15 1303 aa17.1■□□□□ 0.33
PNKP-204ENST00000594661 CASP1P29466 404 aa17.1■□□□□ 0.33
PNKP-204ENST00000594661 AARSP49588 968 aaKnown RBP eCLIP17.1■□□□□ 0.33
PNKP-204ENST00000594661 CHMP4BP1P59074 171 aa17.1■□□□□ 0.33
PNKP-204ENST00000594661 CDC37Q16543 378 aaPredicted RBP17.1■□□□□ 0.33
PNKP-204ENST00000594661 DTHD1Q6ZMT9 781 aa17.1■□□□□ 0.33
PNKP-204ENST00000594661 ACER1Q8TDN7 264 aa17.1■□□□□ 0.33
PNKP-204ENST00000594661 AFAP1L1Q8TED9 768 aa17.1■□□□□ 0.33
PNKP-204ENST00000594661 GBP3Q9H0R5 595 aa17.1■□□□□ 0.33
PNKP-204ENST00000594661 ABCB6Q9NP58 842 aa17.1■□□□□ 0.33
PNKP-204ENST00000594661 ZBTB21Q9ULJ3 1066 aa17.1■□□□□ 0.33
PNKP-204ENST00000594661 FAM169AQ9Y6X4 670 aa17.1■□□□□ 0.33
PNKP-204ENST00000594661 PP2D1A8MPX8 630 aa17.09■□□□□ 0.33
PNKP-204ENST00000594661 ARHGAP6O43182 974 aa17.09■□□□□ 0.33
PNKP-204ENST00000594661 EDIL3O43854 480 aa17.09■□□□□ 0.33
PNKP-204ENST00000594661 ZNF280AP59817 542 aaPredicted RBP17.09■□□□□ 0.33
PNKP-204ENST00000594661 SNAP25P60880 206 aa17.09■□□□□ 0.33
PNKP-204ENST00000594661 IRX1P78414 480 aaPredicted RBP17.09■□□□□ 0.33
PNKP-204ENST00000594661 HSP90AA4PQ58FG1 418 aa17.09■□□□□ 0.33
PNKP-204ENST00000594661 TRMT44Q8IYL2 757 aaKnown RBP17.09■□□□□ 0.33
PNKP-204ENST00000594661 SPICE1Q8N0Z3 855 aa17.09■□□□□ 0.33
PNKP-204ENST00000594661 PNKPQ96T60 521 aa17.09■□□□□ 0.33
PNKP-204ENST00000594661 NFE2L3Q9Y4A8 694 aa17.09■□□□□ 0.33
PNKP-204ENST00000594661 ATXN2Q99700 1313 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms