RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 SLFN14P0C7P3 912 aa23.47■■□□□ 1.35
PNKP-203ENST00000593946 CEP55Q53EZ4 464 aa23.47■■□□□ 1.35
PNKP-203ENST00000593946 BRI3BPQ8WY22 251 aa23.47■■□□□ 1.35
PNKP-203ENST00000593946 FAM20AQ96MK3 541 aa23.47■■□□□ 1.35
PNKP-203ENST00000593946 CYP39A1Q9NYL5 469 aa23.47■■□□□ 1.35
PNKP-203ENST00000593946 KIAA1468Q9P260 1216 aa23.47■■□□□ 1.35
PNKP-203ENST00000593946 PCDHA12Q9UN75 941 aa23.47■■□□□ 1.35
PNKP-203ENST00000593946 MARCH6O60337 910 aa23.46■■□□□ 1.35
PNKP-203ENST00000593946 MDM2Q00987 491 aaPredicted RBP23.46■■□□□ 1.35
PNKP-203ENST00000593946 TYRO3Q06418 890 aa23.46■■□□□ 1.35
PNKP-203ENST00000593946 KARSQ15046 597 aaKnown RBP23.46■■□□□ 1.35
PNKP-203ENST00000593946 PCNX4Q63HM2 1172 aa23.46■■□□□ 1.35
PNKP-203ENST00000593946 KANK3Q6NY19 840 aa23.46■■□□□ 1.35
PNKP-203ENST00000593946 IQUBQ8NA54 791 aa23.46■■□□□ 1.35
PNKP-203ENST00000593946 IL31RAQ8NI17 732 aa23.46■■□□□ 1.35
PNKP-203ENST00000593946 ERCC4Q92889 916 aaPredicted RBP23.46■■□□□ 1.35
PNKP-203ENST00000593946 GJA10Q969M2 543 aa23.46■■□□□ 1.35
PNKP-203ENST00000593946 PAGR1Q9BTK6 254 aa23.46■■□□□ 1.35
PNKP-203ENST00000593946 MMTAG2Q9BU76 263 aaKnown RBP23.46■■□□□ 1.35
PNKP-203ENST00000593946 TXNRD2Q9NNW7 524 aa23.46■■□□□ 1.35
PNKP-203ENST00000593946 DISC1Q9NRI5 854 aa23.46■■□□□ 1.35
PNKP-203ENST00000593946 RBPJLQ9UBG7 517 aa23.46■■□□□ 1.35
PNKP-203ENST00000593946 LRWD1Q9UFC0 647 aa23.46■■□□□ 1.35
PNKP-203ENST00000593946 FBXO40Q9UH90 709 aa23.46■■□□□ 1.35
PNKP-203ENST00000593946 POTEMA6NI47 508 aa23.45■■□□□ 1.34
PNKP-203ENST00000593946 BTBD19C9JJ37 291 aa23.45■■□□□ 1.34
PNKP-203ENST00000593946 MSH4O15457 936 aa23.45■■□□□ 1.34
PNKP-203ENST00000593946 ANKRD23Q86SG2 305 aa23.45■■□□□ 1.34
PNKP-203ENST00000593946 CABP7Q86V35 215 aa23.45■■□□□ 1.34
PNKP-203ENST00000593946 RMDN3Q96TC7 470 aa23.45■■□□□ 1.34
PNKP-203ENST00000593946 PXMP2Q9NR77 195 aa23.45■■□□□ 1.34
PNKP-203ENST00000593946 HOOK1Q9UJC3 728 aaKnown RBP23.45■■□□□ 1.34
PNKP-203ENST00000593946 KIAA1217Q5T5P2 1943 aa23.45■■□□□ 1.34
PNKP-203ENST00000593946 MEIS1O00470 390 aa23.45■■□□□ 1.34
PNKP-203ENST00000593946 KIF3CO14782 793 aa23.45■■□□□ 1.34
PNKP-203ENST00000593946 SETQ01105 290 aaPredicted RBP23.45■■□□□ 1.34
PNKP-203ENST00000593946 PGM5Q15124 567 aa23.45■■□□□ 1.34
PNKP-203ENST00000593946 SASS6Q6UVJ0 657 aa23.45■■□□□ 1.34
PNKP-203ENST00000593946 GTF3C2Q8WUA4 911 aaPredicted RBP23.45■■□□□ 1.34
PNKP-203ENST00000593946 MOV10L1Q9BXT6 1211 aaKnown RBP23.45■■□□□ 1.34
PNKP-203ENST00000593946 ZNFX1Q9P2E3 1918 aaKnown RBP23.44■■□□□ 1.34
PNKP-203ENST00000593946 PDHXO00330 501 aa23.44■■□□□ 1.34
PNKP-203ENST00000593946 FOXN1O15353 648 aa23.44■■□□□ 1.34
PNKP-203ENST00000593946 EIF2AK2P19525 551 aaKnown RBP23.44■■□□□ 1.34
PNKP-203ENST00000593946 PNOCQ13519 176 aa23.44■■□□□ 1.34
PNKP-203ENST00000593946 PDXDC2PQ6P474 469 aa23.44■■□□□ 1.34
PNKP-203ENST00000593946 SH3RF1Q7Z6J0 888 aa23.44■■□□□ 1.34
PNKP-203ENST00000593946 SAPCD2Q86UD0 394 aa23.44■■□□□ 1.34
PNKP-203ENST00000593946 PLA2G4DQ86XP0 818 aa23.44■■□□□ 1.34
PNKP-203ENST00000593946 CEP57L1Q8IYX8 460 aa23.44■■□□□ 1.34
PNKP-203ENST00000593946 PURBQ96QR8 312 aaKnown RBP23.44■■□□□ 1.34
PNKP-203ENST00000593946 MXRA8Q9BRK3 442 aa23.44■■□□□ 1.34
PNKP-203ENST00000593946 PDCD2LQ9BRP1 358 aa23.44■■□□□ 1.34
PNKP-203ENST00000593946 CCDC39Q9UFE4 941 aa23.44■■□□□ 1.34
PNKP-203ENST00000593946 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.43■■□□□ 1.34
PNKP-203ENST00000593946 SLC25A27O95847 323 aa23.43■■□□□ 1.34
PNKP-203ENST00000593946 MRPS9P82933 396 aaKnown RBP23.43■■□□□ 1.34
PNKP-203ENST00000593946 SPIRE1Q08AE8 756 aa23.43■■□□□ 1.34
PNKP-203ENST00000593946 POSTNQ15063 836 aa23.43■■□□□ 1.34
PNKP-203ENST00000593946 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.43■■□□□ 1.34
PNKP-203ENST00000593946 NIPA1Q7RTP0 329 aa23.43■■□□□ 1.34
PNKP-203ENST00000593946 RASAL3Q86YV0 1011 aa23.43■■□□□ 1.34
PNKP-203ENST00000593946 CCDC34Q96HJ3 373 aa23.43■■□□□ 1.34
PNKP-203ENST00000593946 RBSNQ9H1K0 784 aa23.43■■□□□ 1.34
PNKP-203ENST00000593946 TUBE1Q9UJT0 475 aa23.43■■□□□ 1.34
PNKP-203ENST00000593946 PFASO15067 1338 aa23.43■■□□□ 1.34
PNKP-203ENST00000593946 CYP2C8P10632 490 aa23.42■■□□□ 1.34
PNKP-203ENST00000593946 BCRP11274 1271 aa23.42■■□□□ 1.34
PNKP-203ENST00000593946 ITGB5P18084 799 aa23.42■■□□□ 1.34
PNKP-203ENST00000593946 COPB2P35606 906 aa23.42■■□□□ 1.34
PNKP-203ENST00000593946 NAALADL2Q58DX5 795 aa23.42■■□□□ 1.34
PNKP-203ENST00000593946 ARHGEF16Q5VV41 709 aa23.42■■□□□ 1.34
PNKP-203ENST00000593946 UIMC1Q96RL1 719 aa23.42■■□□□ 1.34
PNKP-203ENST00000593946 GRPEL1Q9HAV7 217 aa23.42■■□□□ 1.34
PNKP-203ENST00000593946 UBIAD1Q9Y5Z9 338 aa23.42■■□□□ 1.34
PNKP-203ENST00000593946 STAT6P42226 847 aa23.42■■□□□ 1.34
PNKP-203ENST00000593946 RRAGBQ5VZM2 374 aa23.42■■□□□ 1.34
PNKP-203ENST00000593946 XRRA1Q6P2D8 792 aa23.42■■□□□ 1.34
PNKP-203ENST00000593946 NCAPG2Q86XI2 1143 aa23.42■■□□□ 1.34
PNKP-203ENST00000593946 GRAMD1CQ8IYS0 662 aa23.42■■□□□ 1.34
PNKP-203ENST00000593946 RASSF8Q8NHQ8 419 aa23.42■■□□□ 1.34
PNKP-203ENST00000593946 NSUN6Q8TEA1 469 aaKnown RBP23.42■■□□□ 1.34
PNKP-203ENST00000593946 PAGE5Q96GU1 130 aa23.42■■□□□ 1.34
PNKP-203ENST00000593946 MRE11P49959 708 aa23.41■■□□□ 1.34
PNKP-203ENST00000593946 ZNF157P51786 506 aaPredicted RBP23.41■■□□□ 1.34
PNKP-203ENST00000593946 Q3C1V9 767 aa23.41■■□□□ 1.34
PNKP-203ENST00000593946 FAM43AQ8N2R8 423 aa23.41■■□□□ 1.34
PNKP-203ENST00000593946 SLC5A5Q92911 643 aa23.41■■□□□ 1.34
PNKP-203ENST00000593946 ZFP91Q96JP5 570 aaPredicted RBP23.41■■□□□ 1.34
PNKP-203ENST00000593946 VAV3Q9UKW4 847 aa23.41■■□□□ 1.34
PNKP-203ENST00000593946 TESPA1A2RU30 521 aaPredicted RBP23.4■■□□□ 1.34
PNKP-203ENST00000593946 PRR29P0C7W0 189 aa23.4■■□□□ 1.34
PNKP-203ENST00000593946 PLCG1P19174 1290 aa23.4■■□□□ 1.34
PNKP-203ENST00000593946 ERCC3P19447 782 aa23.4■■□□□ 1.34
PNKP-203ENST00000593946 ERVK-9P63128 1117 aa23.4■■□□□ 1.34
PNKP-203ENST00000593946 ERVK-24P63145 666 aa23.4■■□□□ 1.34
PNKP-203ENST00000593946 STX1AQ16623 288 aa23.4■■□□□ 1.34
PNKP-203ENST00000593946 KRT79Q5XKE5 535 aa23.4■■□□□ 1.34
PNKP-203ENST00000593946 ANKRD35Q8N283 1001 aa23.4■■□□□ 1.34
PNKP-203ENST00000593946 SMC1BQ8NDV3 1235 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms