RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 KCNJ6P48051 423 aa17.2■□□□□ 0.34
PNKP-202ENST00000593706 NT5C2P49902 561 aa17.2■□□□□ 0.34
PNKP-202ENST00000593706 STXBP2Q15833 593 aa17.2■□□□□ 0.34
PNKP-202ENST00000593706 LY6KQ17RY6 165 aa17.2■□□□□ 0.34
PNKP-202ENST00000593706 MCF2L2Q86YR7 1114 aa17.2■□□□□ 0.34
PNKP-202ENST00000593706 ADGRF4Q8IZF3 695 aa17.2■□□□□ 0.34
PNKP-202ENST00000593706 KIF28PB7ZC32 967 aa17.19■□□□□ 0.34
PNKP-202ENST00000593706 BAIAP3O94812 1187 aa17.19■□□□□ 0.34
PNKP-202ENST00000593706 PARP1P09874 1014 aaKnown RBP17.19■□□□□ 0.34
PNKP-202ENST00000593706 ARHGAP1Q07960 439 aa17.19■□□□□ 0.34
PNKP-202ENST00000593706 QRICH1Q2TAL8 776 aa17.19■□□□□ 0.34
PNKP-202ENST00000593706 HERC6Q8IVU3 1022 aa17.19■□□□□ 0.34
PNKP-202ENST00000593706 CAGE1Q8TC20 777 aa17.19■□□□□ 0.34
PNKP-202ENST00000593706 PHOSPHO2Q8TCD6 241 aa17.19■□□□□ 0.34
PNKP-202ENST00000593706 SYTL5Q8TDW5 730 aaPredicted RBP17.19■□□□□ 0.34
PNKP-202ENST00000593706 AFAP1L1Q8TED9 768 aa17.19■□□□□ 0.34
PNKP-202ENST00000593706 ARNTL2Q8WYA1 636 aa17.19■□□□□ 0.34
PNKP-202ENST00000593706 TAAR1Q96RJ0 339 aa17.19■□□□□ 0.34
PNKP-202ENST00000593706 ZSCAN10Q96SZ4 725 aaPredicted RBP17.19■□□□□ 0.34
PNKP-202ENST00000593706 RMDN3Q96TC7 470 aa17.19■□□□□ 0.34
PNKP-202ENST00000593706 MAF1Q9H063 256 aa17.19■□□□□ 0.34
PNKP-202ENST00000593706 COL20A1Q9P218 1284 aa17.19■□□□□ 0.34
PNKP-202ENST00000593706 RFXAPO00287 272 aa17.18■□□□□ 0.34
PNKP-202ENST00000593706 EIF2AK2P19525 551 aaKnown RBP17.18■□□□□ 0.34
PNKP-202ENST00000593706 CASTP20810 708 aaKnown RBP17.18■□□□□ 0.34
PNKP-202ENST00000593706 IMMTQ16891 758 aaKnown RBP17.18■□□□□ 0.34
PNKP-202ENST00000593706 AAK1Q2M2I8 961 aa17.18■□□□□ 0.34
PNKP-202ENST00000593706 ARHGEF16Q5VV41 709 aa17.18■□□□□ 0.34
PNKP-202ENST00000593706 GDF6Q6KF10 455 aaPredicted RBP17.18■□□□□ 0.34
PNKP-202ENST00000593706 CCDC62Q6P9F0 684 aa17.18■□□□□ 0.34
PNKP-202ENST00000593706 FBXO11Q86XK2 927 aa17.18■□□□□ 0.34
PNKP-202ENST00000593706 ENAHQ8N8S7 591 aaPredicted RBP17.18■□□□□ 0.34
PNKP-202ENST00000593706 TBC1D5Q92609 795 aa17.18■□□□□ 0.34
PNKP-202ENST00000593706 IWS1Q96ST2 819 aa17.18■□□□□ 0.34
PNKP-202ENST00000593706 UBAC1Q9BSL1 405 aa17.18■□□□□ 0.34
PNKP-202ENST00000593706 VAT1LQ9HCJ6 419 aa17.18■□□□□ 0.34
PNKP-202ENST00000593706 MRPL11Q9Y3B7 192 aaKnown RBP17.18■□□□□ 0.34
PNKP-202ENST00000593706 HIP1O00291 1037 aa17.17■□□□□ 0.34
PNKP-202ENST00000593706 TLL1O43897 1013 aa17.17■□□□□ 0.34
PNKP-202ENST00000593706 CFBP00751 764 aa17.17■□□□□ 0.34
PNKP-202ENST00000593706 COL9A1P20849 921 aa17.17■□□□□ 0.34
PNKP-202ENST00000593706 TFF2Q03403 129 aa17.17■□□□□ 0.34
PNKP-202ENST00000593706 TAP1Q03518 808 aa17.17■□□□□ 0.34
PNKP-202ENST00000593706 DGKDQ16760 1214 aa17.17■□□□□ 0.34
PNKP-202ENST00000593706 TTC22Q5TAA0 569 aa17.17■□□□□ 0.34
PNKP-202ENST00000593706 LRRC8DQ7L1W4 858 aa17.17■□□□□ 0.34
PNKP-202ENST00000593706 C7orf31Q8N865 590 aa17.17■□□□□ 0.34
PNKP-202ENST00000593706 KATNAL1Q9BW62 490 aa17.17■□□□□ 0.34
PNKP-202ENST00000593706 IL25Q9H293 177 aa17.17■□□□□ 0.34
PNKP-202ENST00000593706 MRVI1Q9Y6F6 885 aa17.17■□□□□ 0.34
PNKP-202ENST00000593706 SELPP16109 830 aa17.16■□□□□ 0.34
PNKP-202ENST00000593706 SESTD1Q86VW0 696 aa17.16■□□□□ 0.34
PNKP-202ENST00000593706 ZBED2Q9BTP6 218 aa17.16■□□□□ 0.34
PNKP-202ENST00000593706 KRT23Q9C075 422 aa17.16■□□□□ 0.34
PNKP-202ENST00000593706 CNNM2Q9H8M5 875 aa17.16■□□□□ 0.34
PNKP-202ENST00000593706 MTCH2Q9Y6C9 303 aa17.16■□□□□ 0.34
PNKP-202ENST00000593706 EPOPA6NHQ4 379 aa17.15■□□□□ 0.34
PNKP-202ENST00000593706 ZNF286BP0CG31 522 aa17.15■□□□□ 0.34
PNKP-202ENST00000593706 WDR5P61964 334 aaKnown RBP17.15■□□□□ 0.34
PNKP-202ENST00000593706 IFIT1BQ5T764 474 aaKnown RBP17.15■□□□□ 0.34
PNKP-202ENST00000593706 ANKS1AQ92625 1134 aa17.15■□□□□ 0.34
PNKP-202ENST00000593706 KAT2BQ92831 832 aa17.15■□□□□ 0.34
PNKP-202ENST00000593706 ALG1Q9BT22 464 aa17.15■□□□□ 0.34
PNKP-202ENST00000593706 DSCC1Q9BVC3 393 aa17.15■□□□□ 0.34
PNKP-202ENST00000593706 JMJD4Q9H9V9 463 aa17.15■□□□□ 0.34
PNKP-202ENST00000593706 PXMP2Q9NR77 195 aa17.15■□□□□ 0.34
PNKP-202ENST00000593706 ZSWIM5Q9P217 1185 aa17.15■□□□□ 0.34
PNKP-202ENST00000593706 GTF2IRD1Q9UHL9 959 aa17.15■□□□□ 0.34
PNKP-202ENST00000593706 CTNNA3Q9UI47 895 aa17.15■□□□□ 0.34
PNKP-202ENST00000593706 RALGAPA2Q2PPJ7 1873 aa17.14■□□□□ 0.33
PNKP-202ENST00000593706 EIF3JO75822 258 aaKnown RBP17.14■□□□□ 0.33
PNKP-202ENST00000593706 ARHGEF15O94989 841 aa17.14■□□□□ 0.33
PNKP-202ENST00000593706 PARNO95453 639 aaKnown RBP17.14■□□□□ 0.33
PNKP-202ENST00000593706 PSEN2P49810 448 aa17.14■□□□□ 0.33
PNKP-202ENST00000593706 KCNQ1P51787 676 aa17.14■□□□□ 0.33
PNKP-202ENST00000593706 KRT40Q6A162 431 aa17.14■□□□□ 0.33
PNKP-202ENST00000593706 CNKSR3Q6P9H4 555 aa17.14■□□□□ 0.33
PNKP-202ENST00000593706 DHX37Q8IY37 1157 aaKnown RBP17.14■□□□□ 0.33
PNKP-202ENST00000593706 EMID1Q96A84 441 aaPredicted RBP17.14■□□□□ 0.33
PNKP-202ENST00000593706 NECAB3Q96P71 396 aaPredicted RBP17.14■□□□□ 0.33
PNKP-202ENST00000593706 AMNQ9BXJ7 453 aa17.14■□□□□ 0.33
PNKP-202ENST00000593706 DDX41Q9UJV9 622 aaKnown RBP17.14■□□□□ 0.33
PNKP-202ENST00000593706 F2P00734 622 aa17.13■□□□□ 0.33
PNKP-202ENST00000593706 NR3C2P08235 984 aa17.13■□□□□ 0.33
PNKP-202ENST00000593706 CKBP12277 381 aa17.13■□□□□ 0.33
PNKP-202ENST00000593706 MYCLP12524 364 aaPredicted RBP17.13■□□□□ 0.33
PNKP-202ENST00000593706 POU3F3P20264 500 aaPredicted RBP17.13■□□□□ 0.33
PNKP-202ENST00000593706 LAMC2Q13753 1193 aa17.13■□□□□ 0.33
PNKP-202ENST00000593706 MFSD10Q14728 455 aa17.13■□□□□ 0.33
PNKP-202ENST00000593706 KIAA0753Q2KHM9 967 aa17.13■□□□□ 0.33
PNKP-202ENST00000593706 TMCO2Q7Z6W1 182 aaPredicted RBP17.13■□□□□ 0.33
PNKP-202ENST00000593706 PPTC7Q8NI37 304 aa17.13■□□□□ 0.33
PNKP-202ENST00000593706 DHX38Q92620 1227 aaKnown RBP17.13■□□□□ 0.33
PNKP-202ENST00000593706 CTAGE1Q96RT6 745 aa17.13■□□□□ 0.33
PNKP-202ENST00000593706 HDAC6Q9UBN7 1215 aa17.13■□□□□ 0.33
PNKP-202ENST00000593706 BMP1P13497 986 aa17.12■□□□□ 0.33
PNKP-202ENST00000593706 HSD17B4P51659 736 aa17.12■□□□□ 0.33
PNKP-202ENST00000593706 DEFB103AP81534 67 aa17.12■□□□□ 0.33
PNKP-202ENST00000593706 RBL2Q08999 1139 aa17.12■□□□□ 0.33
PNKP-202ENST00000593706 GRB10Q13322 594 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms