RNA–Protein interactions for RNA: ENST00000593594.1

PDE4C-205, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 481 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-205ENST00000593594 STXBP2Q15833 593 aa21.78■■□□□ 1.08
PDE4C-205ENST00000593594 SPRED2Q7Z698 418 aa21.78■■□□□ 1.08
PDE4C-205ENST00000593594 ADGRF4Q8IZF3 695 aa21.78■■□□□ 1.08
PDE4C-205ENST00000593594 DHX38Q92620 1227 aaKnown RBP21.78■■□□□ 1.08
PDE4C-205ENST00000593594 IWS1Q96ST2 819 aa21.78■■□□□ 1.08
PDE4C-205ENST00000593594 RMDN3Q96TC7 470 aa21.78■■□□□ 1.08
PDE4C-205ENST00000593594 COG5Q9UP83 839 aa21.78■■□□□ 1.08
PDE4C-205ENST00000593594 GRB10Q13322 594 aa21.77■■□□□ 1.08
PDE4C-205ENST00000593594 CCDC178Q5BJE1 867 aa21.77■■□□□ 1.08
PDE4C-205ENST00000593594 LRRC8DQ7L1W4 858 aa21.77■■□□□ 1.08
PDE4C-205ENST00000593594 IQCA1Q86XH1 822 aa21.77■■□□□ 1.08
PDE4C-205ENST00000593594 MCF2L2Q86YR7 1114 aa21.77■■□□□ 1.08
PDE4C-205ENST00000593594 LNPKQ9C0E8 428 aa21.77■■□□□ 1.08
PDE4C-205ENST00000593594 KAT14Q9H8E8 782 aa21.77■■□□□ 1.08
PDE4C-205ENST00000593594 KDM4AO75164 1064 aa21.76■■□□□ 1.07
PDE4C-205ENST00000593594 SDSP20132 328 aa21.76■■□□□ 1.07
PDE4C-205ENST00000593594 NT5C2P49902 561 aa21.76■■□□□ 1.07
PDE4C-205ENST00000593594 RBL2Q08999 1139 aa21.76■■□□□ 1.07
PDE4C-205ENST00000593594 DGKDQ16760 1214 aa21.76■■□□□ 1.07
PDE4C-205ENST00000593594 QRICH1Q2TAL8 776 aa21.76■■□□□ 1.07
PDE4C-205ENST00000593594 TMCO2Q7Z6W1 182 aaPredicted RBP21.76■■□□□ 1.07
PDE4C-205ENST00000593594 ANKS1AQ92625 1134 aa21.76■■□□□ 1.07
PDE4C-205ENST00000593594 GTF2IRD1Q9UHL9 959 aa21.76■■□□□ 1.07
PDE4C-205ENST00000593594 DDX41Q9UJV9 622 aaKnown RBP21.76■■□□□ 1.07
PDE4C-205ENST00000593594 PTPRSQ13332 1948 aa21.76■■□□□ 1.07
PDE4C-205ENST00000593594 LCHNA4D1U4 455 aa21.75■■□□□ 1.07
PDE4C-205ENST00000593594 LPXNO60711 386 aa21.75■■□□□ 1.07
PDE4C-205ENST00000593594 PARNO95453 639 aaKnown RBP21.75■■□□□ 1.07
PDE4C-205ENST00000593594 CXCL10P02778 98 aa21.75■■□□□ 1.07
PDE4C-205ENST00000593594 ASPRV1Q53RT3 343 aa21.75■■□□□ 1.07
PDE4C-205ENST00000593594 ARHGEF16Q5VV41 709 aa21.75■■□□□ 1.07
PDE4C-205ENST00000593594 CNKSR3Q6P9H4 555 aa21.75■■□□□ 1.07
PDE4C-205ENST00000593594 FBXO11Q86XK2 927 aa21.75■■□□□ 1.07
PDE4C-205ENST00000593594 ZBED2Q9BTP6 218 aa21.75■■□□□ 1.07
PDE4C-205ENST00000593594 C1QTNF1Q9BXJ1 281 aa21.75■■□□□ 1.07
PDE4C-205ENST00000593594 HDAC6Q9UBN7 1215 aa21.75■■□□□ 1.07
PDE4C-205ENST00000593594 MRPL11Q9Y3B7 192 aaKnown RBP21.75■■□□□ 1.07
PDE4C-205ENST00000593594 KIAA1217Q5T5P2 1943 aa21.74■■□□□ 1.07
PDE4C-205ENST00000593594 NBNO60934 754 aa21.74■■□□□ 1.07
PDE4C-205ENST00000593594 EIF3JO75822 258 aaKnown RBP21.74■■□□□ 1.07
PDE4C-205ENST00000593594 CKBP12277 381 aa21.74■■□□□ 1.07
PDE4C-205ENST00000593594 EIF2AK2P19525 551 aaKnown RBP21.74■■□□□ 1.07
PDE4C-205ENST00000593594 DEFB103AP81534 67 aa21.74■■□□□ 1.07
PDE4C-205ENST00000593594 C7orf31Q8N865 590 aa21.74■■□□□ 1.07
PDE4C-205ENST00000593594 ENAHQ8N8S7 591 aaPredicted RBP21.74■■□□□ 1.07
PDE4C-205ENST00000593594 HLA-CQ95604 372 aa21.74■■□□□ 1.07
PDE4C-205ENST00000593594 EMID1Q96A84 441 aaPredicted RBP21.74■■□□□ 1.07
PDE4C-205ENST00000593594 ZSCAN10Q96SZ4 725 aaPredicted RBP21.74■■□□□ 1.07
PDE4C-205ENST00000593594 JMJD4Q9H9V9 463 aa21.74■■□□□ 1.07
PDE4C-205ENST00000593594 B4E1Z4 1266 aa21.73■■□□□ 1.07
PDE4C-205ENST00000593594 DHX16O60231 1041 aaKnown RBP21.73■■□□□ 1.07
PDE4C-205ENST00000593594 CENPBP07199 599 aaPredicted RBP21.73■■□□□ 1.07
PDE4C-205ENST00000593594 NR3C2P08235 984 aa21.73■■□□□ 1.07
PDE4C-205ENST00000593594 PARP1P09874 1014 aaKnown RBP21.73■■□□□ 1.07
PDE4C-205ENST00000593594 PSEN2P49810 448 aa21.73■■□□□ 1.07
PDE4C-205ENST00000593594 TCTN1Q2MV58 587 aa21.73■■□□□ 1.07
PDE4C-205ENST00000593594 ALG1Q9BT22 464 aa21.73■■□□□ 1.07
PDE4C-205ENST00000593594 VAT1LQ9HCJ6 419 aa21.73■■□□□ 1.07
PDE4C-205ENST00000593594 PXMP2Q9NR77 195 aa21.73■■□□□ 1.07
PDE4C-205ENST00000593594 MRVI1Q9Y6F6 885 aa21.73■■□□□ 1.07
PDE4C-205ENST00000593594 LAMA4Q16363 1823 aa21.72■■□□□ 1.07
PDE4C-205ENST00000593594 LAMC2Q13753 1193 aa21.72■■□□□ 1.07
PDE4C-205ENST00000593594 MFSD10Q14728 455 aa21.72■■□□□ 1.07
PDE4C-205ENST00000593594 PPTC7Q8NI37 304 aa21.72■■□□□ 1.07
PDE4C-205ENST00000593594 KATNAL1Q9BW62 490 aa21.72■■□□□ 1.07
PDE4C-205ENST00000593594 LMCD1Q9NZU5 365 aa21.72■■□□□ 1.07
PDE4C-205ENST00000593594 ZSWIM5Q9P217 1185 aa21.72■■□□□ 1.07
PDE4C-205ENST00000593594 MYH6P13533 1939 aa21.71■■□□□ 1.07
PDE4C-205ENST00000593594 ABHD14A-ACY1A0A1B0GW23 586 aa21.71■■□□□ 1.07
PDE4C-205ENST00000593594 HAS3O00219 553 aa21.71■■□□□ 1.07
PDE4C-205ENST00000593594 GJB5O95377 273 aa21.71■■□□□ 1.07
PDE4C-205ENST00000593594 F2P00734 622 aa21.71■■□□□ 1.07
PDE4C-205ENST00000593594 CFBP00751 764 aa21.71■■□□□ 1.07
PDE4C-205ENST00000593594 ZNF286BP0CG31 522 aa21.71■■□□□ 1.07
PDE4C-205ENST00000593594 PTK7Q13308 1070 aa21.71■■□□□ 1.07
PDE4C-205ENST00000593594 KIAA0753Q2KHM9 967 aa21.71■■□□□ 1.07
PDE4C-205ENST00000593594 CWC27Q6UX04 472 aaKnown RBP21.71■■□□□ 1.07
PDE4C-205ENST00000593594 DHX37Q8IY37 1157 aaKnown RBP21.71■■□□□ 1.07
PDE4C-205ENST00000593594 GDPD5Q8WTR4 605 aa21.71■■□□□ 1.07
PDE4C-205ENST00000593594 RAD9AQ99638 391 aa21.71■■□□□ 1.07
PDE4C-205ENST00000593594 COL4A4P53420 1690 aaPredicted RBP21.71■■□□□ 1.07
PDE4C-205ENST00000593594 BRWD1Q9NSI6 2320 aa21.71■■□□□ 1.07
PDE4C-205ENST00000593594 OPLAHO14841 1288 aa21.7■■□□□ 1.06
PDE4C-205ENST00000593594 PLA2G5P39877 138 aa21.7■■□□□ 1.06
PDE4C-205ENST00000593594 HSD17B4P51659 736 aa21.7■■□□□ 1.06
PDE4C-205ENST00000593594 TRIM71Q2Q1W2 868 aaKnown RBP21.7■■□□□ 1.06
PDE4C-205ENST00000593594 B4GALNT3Q6L9W6 998 aa21.7■■□□□ 1.06
PDE4C-205ENST00000593594 TRAF7Q6Q0C0 670 aa21.7■■□□□ 1.06
PDE4C-205ENST00000593594 WNT8BQ93098 351 aa21.7■■□□□ 1.06
PDE4C-205ENST00000593594 EPHX3Q9H6B9 360 aa21.7■■□□□ 1.06
PDE4C-205ENST00000593594 RBAK-RBAKDNI3L0D1 243 aa21.69■■□□□ 1.06
PDE4C-205ENST00000593594 EFCAB14O75071 495 aa21.69■■□□□ 1.06
PDE4C-205ENST00000593594 HOXD8P13378 290 aaPredicted RBP21.69■■□□□ 1.06
PDE4C-205ENST00000593594 ERVK-21P61565 698 aa21.69■■□□□ 1.06
PDE4C-205ENST00000593594 ZNF200P98182 395 aaPredicted RBP21.69■■□□□ 1.06
PDE4C-205ENST00000593594 IKBKEQ14164 716 aa21.69■■□□□ 1.06
PDE4C-205ENST00000593594 ZNF618Q5T7W0 954 aa21.69■■□□□ 1.06
PDE4C-205ENST00000593594 PLEKHM2Q8IWE5 1019 aa21.69■■□□□ 1.06
PDE4C-205ENST00000593594 SMC5Q8IY18 1101 aa21.69■■□□□ 1.06
PDE4C-205ENST00000593594 AMNQ9BXJ7 453 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms