RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 A0A1W2PQJ5 194 aa18.46■□□□□ 0.55
PRKCSH-217ENST00000592741 H0YIN7 160 aa18.46■□□□□ 0.55
PRKCSH-217ENST00000592741 ZSCAN20P17040 1043 aaPredicted RBP18.46■□□□□ 0.55
PRKCSH-217ENST00000592741 CYLC1P35663 651 aaPredicted RBP18.46■□□□□ 0.55
PRKCSH-217ENST00000592741 ICA1Q05084 483 aa18.46■□□□□ 0.55
PRKCSH-217ENST00000592741 WDR59Q6PJI9 974 aa18.46■□□□□ 0.55
PRKCSH-217ENST00000592741 TMEM179Q6ZVK1 233 aa18.46■□□□□ 0.55
PRKCSH-217ENST00000592741 KCNK18Q7Z418 384 aa18.46■□□□□ 0.55
PRKCSH-217ENST00000592741 TSG101Q99816 390 aa18.46■□□□□ 0.55
PRKCSH-217ENST00000592741 ANO3Q9BYT9 981 aa18.46■□□□□ 0.55
PRKCSH-217ENST00000592741 HAUS4Q9H6D7 363 aa18.46■□□□□ 0.55
PRKCSH-217ENST00000592741 SERPINA10Q9UK55 444 aa18.46■□□□□ 0.55
PRKCSH-217ENST00000592741 SLC26A4O43511 780 aa18.45■□□□□ 0.54
PRKCSH-217ENST00000592741 KLK7P49862 253 aa18.45■□□□□ 0.54
PRKCSH-217ENST00000592741 KRT83P78385 493 aa18.45■□□□□ 0.54
PRKCSH-217ENST00000592741 HYIQ5T013 277 aa18.45■□□□□ 0.54
PRKCSH-217ENST00000592741 TATDN1Q6P1N9 297 aa18.45■□□□□ 0.54
PRKCSH-217ENST00000592741 AGPAT5Q9NUQ2 364 aa18.45■□□□□ 0.54
PRKCSH-217ENST00000592741 RASSF10A6NK89 507 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 USP17L15C9J2P7 530 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 USP17L13C9JLJ4 530 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 USP17L11C9JVI0 530 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 USP17L18D6R9N7 530 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 USP17L22D6RA61 530 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 USP17L17D6RBQ6 530 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 USP17L19D6RCP7 530 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 USP17L20D6RJB6 530 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 ABL1P00519 1130 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 USP11P51784 963 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 EHHADHQ08426 723 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 USP17L24Q0WX57 530 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 ECM1Q16610 540 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 VWA3BQ502W6 1294 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 USP17L6PQ6QN14 398 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 SH3BP5LQ7L8J4 393 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 BMP2KQ9NSY1 1161 aaPredicted RBP18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 ZNF646O15015 1829 aaPredicted RBP18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 ZRANB2O95218 330 aaKnown RBP eCLIP18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 TUBB4BP68371 445 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 AP3B2Q13367 1082 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 MAN2A1Q16706 1144 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 SHROOM1Q2M3G4 852 aaPredicted RBP18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 FOXR2Q6PJQ5 311 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 CCDC170Q8IYT3 715 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 FHOD1Q9Y613 1164 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 SCN9AQ15858 1988 aa18.44■□□□□ 0.54
PRKCSH-217ENST00000592741 IPO7O95373 1038 aaKnown RBP18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 HERVK_113P62684 666 aa18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 GABPB1Q06547 395 aaPredicted RBP18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 DMTNQ08495 405 aa18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 COASYQ13057 564 aa18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 WHAMMP3Q1A5X7 153 aa18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 MCTP2Q6DN12 878 aa18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 GJA10Q969M2 543 aa18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 EPC1Q9H2F5 836 aa18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 GUCA1BQ9UMX6 200 aa18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 CYP3A7-CYP3A51PA0A087WV96 503 aa18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 PNMA6AP0CW24 399 aaPredicted RBP18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 CYP3A7P24462 503 aa18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 ABCB5Q2M3G0 1257 aa18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 MOXD1Q6UVY6 613 aa18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 ZNF662Q6ZS27 426 aa18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 KIAA1328Q86T90 577 aa18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 GMCL1P1Q8NEA9 526 aa18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 NDST4Q9H3R1 872 aa18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 ZSWIM4Q9H7M6 989 aa18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 PUF60Q9UHX1 559 aaKnown RBP18.43■□□□□ 0.54
PRKCSH-217ENST00000592741 POTEB2H3BUK9 544 aa18.42■□□□□ 0.54
PRKCSH-217ENST00000592741 ATP8B1O43520 1251 aa18.42■□□□□ 0.54
PRKCSH-217ENST00000592741 CDK17Q00537 523 aa18.42■□□□□ 0.54
PRKCSH-217ENST00000592741 SLFN12Q8IYM2 578 aa18.42■□□□□ 0.54
PRKCSH-217ENST00000592741 MYOCDQ8IZQ8 938 aa18.42■□□□□ 0.54
PRKCSH-217ENST00000592741 EHBP1Q8NDI1 1231 aa18.42■□□□□ 0.54
PRKCSH-217ENST00000592741 DNAJC19Q96DA6 116 aa18.42■□□□□ 0.54
PRKCSH-217ENST00000592741 MBOAT7Q96N66 472 aa18.42■□□□□ 0.54
PRKCSH-217ENST00000592741 AMNQ9BXJ7 453 aa18.42■□□□□ 0.54
PRKCSH-217ENST00000592741 PARD6BQ9BYG5 372 aa18.42■□□□□ 0.54
PRKCSH-217ENST00000592741 NHEJ1Q9H9Q4 299 aaPredicted RBP18.42■□□□□ 0.54
PRKCSH-217ENST00000592741 KCNMB3Q9NPA1 279 aa18.42■□□□□ 0.54
PRKCSH-217ENST00000592741 PANK4Q9NVE7 773 aa18.42■□□□□ 0.54
PRKCSH-217ENST00000592741 ZNF219Q9P2Y4 722 aaPredicted RBP18.42■□□□□ 0.54
PRKCSH-217ENST00000592741 SLX4Q8IY92 1834 aa18.42■□□□□ 0.54
PRKCSH-217ENST00000592741 EIF3CLB5ME19 914 aaKnown RBP18.41■□□□□ 0.54
PRKCSH-217ENST00000592741 F5H6K3 240 aa18.41■□□□□ 0.54
PRKCSH-217ENST00000592741 GDF11O95390 407 aa18.41■□□□□ 0.54
PRKCSH-217ENST00000592741 SSBP05455 408 aaKnown RBP eCLIP18.41■□□□□ 0.54
PRKCSH-217ENST00000592741 KLRC3Q07444 240 aa18.41■□□□□ 0.54
PRKCSH-217ENST00000592741 CCDC122Q5T0U0 273 aa18.41■□□□□ 0.54
PRKCSH-217ENST00000592741 UTP14CQ5TAP6 766 aaKnown RBP18.41■□□□□ 0.54
PRKCSH-217ENST00000592741 SIAH1Q8IUQ4 282 aa18.41■□□□□ 0.54
PRKCSH-217ENST00000592741 GMCL1Q96IK5 515 aa18.41■□□□□ 0.54
PRKCSH-217ENST00000592741 EIF3CQ99613 913 aaKnown RBP18.41■□□□□ 0.54
PRKCSH-217ENST00000592741 LRRC41Q15345 812 aa18.41■□□□□ 0.54
PRKCSH-217ENST00000592741 FAM26FQ5R3K3 315 aa18.41■□□□□ 0.54
PRKCSH-217ENST00000592741 CC2D1AQ6P1N0 951 aaPredicted RBP18.41■□□□□ 0.54
PRKCSH-217ENST00000592741 LRRC55Q6ZSA7 311 aa18.41■□□□□ 0.54
PRKCSH-217ENST00000592741 CCDC65Q8IXS2 484 aa18.41■□□□□ 0.54
PRKCSH-217ENST00000592741 CNKSR1Q969H4 720 aa18.41■□□□□ 0.54
PRKCSH-217ENST00000592741 JAKMIP2Q96AA8 810 aa18.41■□□□□ 0.54
PRKCSH-217ENST00000592741 TRIM10Q9UDY6 481 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms