RNA–Protein interactions for RNA: ENST00000592488.2

AP3D1-212, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-212ENST00000592488 CMTR1Q8N1G2 835 aaKnown RBP19.47■□□□□ 0.71
AP3D1-212ENST00000592488 FANCBQ8NB91 859 aa19.47■□□□□ 0.71
AP3D1-212ENST00000592488 TCEANC2Q96MN5 208 aa19.47■□□□□ 0.71
AP3D1-212ENST00000592488 MRVI1Q9Y6F6 885 aa19.47■□□□□ 0.71
AP3D1-212ENST00000592488 SCN10AQ9Y5Y9 1956 aa19.46■□□□□ 0.71
AP3D1-212ENST00000592488 CCND2P30279 289 aa19.46■□□□□ 0.71
AP3D1-212ENST00000592488 EPHB4P54760 987 aa19.46■□□□□ 0.71
AP3D1-212ENST00000592488 IL31RAQ8NI17 732 aa19.46■□□□□ 0.71
AP3D1-212ENST00000592488 AFG1LQ8WV93 481 aa19.46■□□□□ 0.71
AP3D1-212ENST00000592488 PPP1R12CQ9BZL4 782 aa19.46■□□□□ 0.71
AP3D1-212ENST00000592488 TRPV6Q9H1D0 765 aa19.46■□□□□ 0.71
AP3D1-212ENST00000592488 ALDH8A1Q9H2A2 487 aaPredicted RBP19.46■□□□□ 0.71
AP3D1-212ENST00000592488 DDX41Q9UJV9 622 aaKnown RBP19.46■□□□□ 0.71
AP3D1-212ENST00000592488 B4GALT4O60513 344 aa19.45■□□□□ 0.7
AP3D1-212ENST00000592488 RGS20O76081 388 aa19.45■□□□□ 0.7
AP3D1-212ENST00000592488 REC8O95072 547 aa19.45■□□□□ 0.7
AP3D1-212ENST00000592488 KCNV1Q6PIU1 500 aa19.45■□□□□ 0.7
AP3D1-212ENST00000592488 KCNB2Q92953 911 aa19.45■□□□□ 0.7
AP3D1-212ENST00000592488 CUL5Q93034 780 aa19.45■□□□□ 0.7
AP3D1-212ENST00000592488 EMID1Q96A84 441 aaPredicted RBP19.45■□□□□ 0.7
AP3D1-212ENST00000592488 FRMPD4Q14CM0 1322 aa19.45■□□□□ 0.7
AP3D1-212ENST00000592488 ZBTB43O43298 467 aa19.44■□□□□ 0.7
AP3D1-212ENST00000592488 MMP3P08254 477 aa19.44■□□□□ 0.7
AP3D1-212ENST00000592488 HSPA4P34932 840 aa19.44■□□□□ 0.7
AP3D1-212ENST00000592488 PPIGQ13427 754 aaKnown RBP eCLIP19.44■□□□□ 0.79e-11■□□□□ 9.1
AP3D1-212ENST00000592488 NBPF20Q3BBV1 942 aa19.44■□□□□ 0.7
AP3D1-212ENST00000592488 CCDC82Q8N4S0 544 aa19.44■□□□□ 0.7
AP3D1-212ENST00000592488 TMEM199Q8N511 208 aa19.44■□□□□ 0.7
AP3D1-212ENST00000592488 SMARCC2Q8TAQ2 1214 aa19.44■□□□□ 0.7
AP3D1-212ENST00000592488 RNPC3Q96LT9 517 aaKnown RBP19.44■□□□□ 0.7
AP3D1-212ENST00000592488 HIPK3Q9H422 1215 aa19.44■□□□□ 0.7
AP3D1-212ENST00000592488 RBM28Q9NW13 759 aaKnown RBP19.44■□□□□ 0.7
AP3D1-212ENST00000592488 PIK3CDO00329 1044 aa19.43■□□□□ 0.7
AP3D1-212ENST00000592488 SUPT20HL2P0C7V6 817 aa19.43■□□□□ 0.7
AP3D1-212ENST00000592488 CYP2C18P33260 490 aa19.43■□□□□ 0.7
AP3D1-212ENST00000592488 FGD1P98174 961 aa19.43■□□□□ 0.7
AP3D1-212ENST00000592488 LAMC2Q13753 1193 aa19.43■□□□□ 0.7
AP3D1-212ENST00000592488 FAM47CQ5HY64 1035 aa19.43■□□□□ 0.7
AP3D1-212ENST00000592488 ERICH6BQ5W0A0 696 aa19.43■□□□□ 0.7
AP3D1-212ENST00000592488 NFRKBQ6P4R8 1299 aa19.43■□□□□ 0.7
AP3D1-212ENST00000592488 USP17L6PQ6QN14 398 aa19.43■□□□□ 0.7
AP3D1-212ENST00000592488 DHX37Q8IY37 1157 aaKnown RBP19.43■□□□□ 0.7
AP3D1-212ENST00000592488 JAKMIP1Q96N16 626 aaKnown RBP19.43■□□□□ 0.7
AP3D1-212ENST00000592488 NOC4LQ9BVI4 516 aaKnown RBP19.43■□□□□ 0.7
AP3D1-212ENST00000592488 PPP4R2Q9NY27 417 aa19.43■□□□□ 0.7
AP3D1-212ENST00000592488 BRPF3Q9ULD4 1205 aa19.43■□□□□ 0.7
AP3D1-212ENST00000592488 SNX14Q9Y5W7 946 aa19.43■□□□□ 0.7
AP3D1-212ENST00000592488 KLF18A0A0U1RQI7 1052 aa19.42■□□□□ 0.7
AP3D1-212ENST00000592488 hCG_1642624A0A1W2PR95 340 aa19.42■□□□□ 0.7
AP3D1-212ENST00000592488 CSF2RAP15509 400 aa19.42■□□□□ 0.7
AP3D1-212ENST00000592488 CASTP20810 708 aaKnown RBP19.42■□□□□ 0.7
AP3D1-212ENST00000592488 RTN1Q16799 776 aa19.42■□□□□ 0.7
AP3D1-212ENST00000592488 GNPTABQ3T906 1256 aa19.42■□□□□ 0.7
AP3D1-212ENST00000592488 DEFB123Q8N688 67 aa19.42■□□□□ 0.7
AP3D1-212ENST00000592488 PPTC7Q8NI37 304 aa19.42■□□□□ 0.7
AP3D1-212ENST00000592488 TRMT13Q9NUP7 481 aaKnown RBP19.42■□□□□ 0.7
AP3D1-212ENST00000592488 CNTNAP5Q8WYK1 1306 aa19.42■□□□□ 0.7
AP3D1-212ENST00000592488 COL6A3P12111 3177 aa19.41■□□□□ 0.7
AP3D1-212ENST00000592488 GOLGA8AA7E2F4 631 aa19.41■□□□□ 0.7
AP3D1-212ENST00000592488 GOLGA8BA8MQT2 603 aa19.41■□□□□ 0.7
AP3D1-212ENST00000592488 MEIS2O14770 477 aa19.41■□□□□ 0.7
AP3D1-212ENST00000592488 STAM2O75886 525 aa19.41■□□□□ 0.7
AP3D1-212ENST00000592488 TGFB3P10600 412 aa19.41■□□□□ 0.7
AP3D1-212ENST00000592488 RCAN1P53805 252 aa19.41■□□□□ 0.7
AP3D1-212ENST00000592488 PTPN11Q06124 597 aaPredicted RBP19.41■□□□□ 0.7
AP3D1-212ENST00000592488 DGKDQ16760 1214 aa19.41■□□□□ 0.7
AP3D1-212ENST00000592488 HEATR3Q7Z4Q2 680 aa19.41■□□□□ 0.7
AP3D1-212ENST00000592488 PSTPIP2Q9H939 334 aa19.41■□□□□ 0.7
AP3D1-212ENST00000592488 UMODL1Q5DID0 1318 aa19.41■□□□□ 0.7
AP3D1-212ENST00000592488 GGPS1O95749 300 aa19.4■□□□□ 0.7
AP3D1-212ENST00000592488 CPA1P15085 419 aa19.4■□□□□ 0.7
AP3D1-212ENST00000592488 UBA1P22314 1058 aaKnown RBP19.4■□□□□ 0.7
AP3D1-212ENST00000592488 CHMP4BP1P59074 171 aa19.4■□□□□ 0.7
AP3D1-212ENST00000592488 MRPS9P82933 396 aaKnown RBP19.4■□□□□ 0.7
AP3D1-212ENST00000592488 CELF3Q5SZQ8 465 aaKnown RBP19.4■□□□□ 0.7
AP3D1-212ENST00000592488 MYSM1Q5VVJ2 828 aa19.4■□□□□ 0.7
AP3D1-212ENST00000592488 PSRC1Q6PGN9 363 aaPredicted RBP19.4■□□□□ 0.7
AP3D1-212ENST00000592488 BLOC1S2Q6QNY1 142 aa19.4■□□□□ 0.7
AP3D1-212ENST00000592488 Q7L0L9 218 aa19.4■□□□□ 0.7
AP3D1-212ENST00000592488 GPKOWQ92917 476 aaPredicted RBP eCLIP19.4■□□□□ 0.7
AP3D1-212ENST00000592488 ZFP91Q96JP5 570 aaPredicted RBP19.4■□□□□ 0.7
AP3D1-212ENST00000592488 INPP4AQ96PE3 977 aaPredicted RBP19.4■□□□□ 0.7
AP3D1-212ENST00000592488 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.4■□□□□ 0.71e-7■■■■□ 23
AP3D1-212ENST00000592488 EPB41L2O43491 1005 aaKnown RBP19.39■□□□□ 0.69
AP3D1-212ENST00000592488 SMAD3P84022 425 aaKnown RBP19.39■□□□□ 0.69
AP3D1-212ENST00000592488 PCNX4Q63HM2 1172 aa19.39■□□□□ 0.69
AP3D1-212ENST00000592488 FAM109BQ6ICB4 259 aaPredicted RBP19.39■□□□□ 0.69
AP3D1-212ENST00000592488 XRRA1Q6P2D8 792 aa19.39■□□□□ 0.69
AP3D1-212ENST00000592488 Q6ZUG5 572 aa19.39■□□□□ 0.69
AP3D1-212ENST00000592488 C16orf59Q7L2K0 433 aa19.39■□□□□ 0.69
AP3D1-212ENST00000592488 PPP1R13LQ8WUF5 828 aa19.39■□□□□ 0.69
AP3D1-212ENST00000592488 KAT2BQ92831 832 aa19.39■□□□□ 0.69
AP3D1-212ENST00000592488 SPATA33Q96N06 139 aa19.39■□□□□ 0.69
AP3D1-212ENST00000592488 WNT8AQ9H1J5 351 aa19.39■□□□□ 0.69
AP3D1-212ENST00000592488 IL23AQ9NPF7 189 aa19.39■□□□□ 0.69
AP3D1-212ENST00000592488 NAP1L2Q9ULW6 460 aaPredicted RBP19.39■□□□□ 0.69
AP3D1-212ENST00000592488 MYH7BA7E2Y1 1941 aa19.39■□□□□ 0.69
AP3D1-212ENST00000592488 CENPBP07199 599 aaPredicted RBP19.38■□□□□ 0.69
AP3D1-212ENST00000592488 CYP2C9P11712 490 aa19.38■□□□□ 0.69
AP3D1-212ENST00000592488 HOXD8P13378 290 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms