RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 PRB1P04280 392 aa6.24□□□□□ -1.41
ERCC1-216ENST00000592444 PGK2P07205 417 aa6.24□□□□□ -1.41
ERCC1-216ENST00000592444 ATF7P17544 494 aaPredicted RBP6.24□□□□□ -1.41
ERCC1-216ENST00000592444 JAG1P78504 1218 aa6.24□□□□□ -1.41
ERCC1-216ENST00000592444 SRSF1Q07955 248 aaKnown RBP eCLIP6.24□□□□□ -1.41
ERCC1-216ENST00000592444 KCNH2Q12809 1159 aa6.24□□□□□ -1.41
ERCC1-216ENST00000592444 AMHR2Q16671 573 aa6.24□□□□□ -1.41
ERCC1-216ENST00000592444 LBX2Q6XYB7 198 aa6.24□□□□□ -1.41
ERCC1-216ENST00000592444 CATSPERGQ6ZRH7 1159 aa6.24□□□□□ -1.41
ERCC1-216ENST00000592444 FBXO33Q7Z6M2 555 aa6.24□□□□□ -1.41
ERCC1-216ENST00000592444 TMEM192Q8IY95 271 aa6.24□□□□□ -1.41
ERCC1-216ENST00000592444 ABRAQ8N0Z2 381 aa6.24□□□□□ -1.41
ERCC1-216ENST00000592444 PRR7Q8TB68 274 aa6.24□□□□□ -1.41
ERCC1-216ENST00000592444 DDX1Q92499 740 aaKnown RBP6.24□□□□□ -1.41
ERCC1-216ENST00000592444 SAMD11Q96NU1 681 aa6.24□□□□□ -1.41
ERCC1-216ENST00000592444 UPF3AQ9H1J1 476 aaKnown RBP6.24□□□□□ -1.41
ERCC1-216ENST00000592444 ALDH8A1Q9H2A2 487 aaPredicted RBP6.24□□□□□ -1.41
ERCC1-216ENST00000592444 MBIPQ9NS73 344 aa6.24□□□□□ -1.41
ERCC1-216ENST00000592444 ZHX1Q9UKY1 873 aaPredicted RBP6.24□□□□□ -1.41
ERCC1-216ENST00000592444 BARX2Q9UMQ3 279 aaPredicted RBP6.24□□□□□ -1.41
ERCC1-216ENST00000592444 INSL6Q9Y581 213 aa6.24□□□□□ -1.41
ERCC1-216ENST00000592444 ITPR3Q14573 2671 aa6.24□□□□□ -1.41
ERCC1-216ENST00000592444 RBAK-RBAKDNI3L0D1 243 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 CTAGE5O15320 804 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 CSF1RP07333 972 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 SPINK2P20155 84 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 LORP23490 312 aaPredicted RBP6.23□□□□□ -1.41
ERCC1-216ENST00000592444 PSMC6P62333 389 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 UBE4AQ14139 1066 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 SUZ12Q15022 739 aaKnown RBP6.23□□□□□ -1.41
ERCC1-216ENST00000592444 ZYXQ15942 572 aaKnown RBP6.23□□□□□ -1.41
ERCC1-216ENST00000592444 CCDC6Q16204 474 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 SHROOM1Q2M3G4 852 aaPredicted RBP6.23□□□□□ -1.41
ERCC1-216ENST00000592444 DESI1Q6ICB0 168 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 USP17L2Q6R6M4 530 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 UBE3BQ7Z3V4 1068 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 TRIM46Q7Z4K8 759 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 NCAPG2Q86XI2 1143 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 RETREG2Q8NC44 543 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 SUSD6Q92537 303 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 BAP1Q92560 729 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 METTL22Q9BUU2 404 aaPredicted RBP6.23□□□□□ -1.41
ERCC1-216ENST00000592444 SPATC1LQ9H0A9 340 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 SIL1Q9H173 461 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 PHAXQ9H814 394 aaKnown RBP6.23□□□□□ -1.41
ERCC1-216ENST00000592444 RAI2Q9Y5P3 530 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 DLG5Q8TDM6 1919 aa6.23□□□□□ -1.41
ERCC1-216ENST00000592444 GRM6O15303 877 aa6.22□□□□□ -1.41
ERCC1-216ENST00000592444 CABYRO75952 493 aa6.22□□□□□ -1.41
ERCC1-216ENST00000592444 ASGR2P07307 311 aa6.22□□□□□ -1.41
ERCC1-216ENST00000592444 SUPT20HL2P0C7V6 817 aa6.22□□□□□ -1.41
ERCC1-216ENST00000592444 FCER1AP12319 257 aa6.22□□□□□ -1.41
ERCC1-216ENST00000592444 SPEM2Q0P670 501 aa6.22□□□□□ -1.41
ERCC1-216ENST00000592444 TCTN1Q2MV58 587 aa6.22□□□□□ -1.41
ERCC1-216ENST00000592444 COL28A1Q2UY09 1125 aa6.22□□□□□ -1.41
ERCC1-216ENST00000592444 LINC01559Q495D7 138 aa6.22□□□□□ -1.41
ERCC1-216ENST00000592444 FBXO11Q86XK2 927 aa6.22□□□□□ -1.41
ERCC1-216ENST00000592444 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.22□□□□□ -1.41
ERCC1-216ENST00000592444 GATA6Q92908 595 aa6.22□□□□□ -1.41
ERCC1-216ENST00000592444 SEZ6LQ9BYH1 1024 aa6.22□□□□□ -1.41
ERCC1-216ENST00000592444 MROH8Q9H579 483 aa6.22□□□□□ -1.41
ERCC1-216ENST00000592444 KCNK4Q9NYG8 393 aa6.22□□□□□ -1.41
ERCC1-216ENST00000592444 SMG5Q9UPR3 1016 aaKnown RBP6.22□□□□□ -1.41
ERCC1-216ENST00000592444 GPSM3Q9Y4H4 160 aa6.22□□□□□ -1.41
ERCC1-216ENST00000592444 ZNFX1Q9P2E3 1918 aaKnown RBP6.22□□□□□ -1.41
ERCC1-216ENST00000592444 RELNP78509 3460 aa6.22□□□□□ -1.41
ERCC1-216ENST00000592444 UBR5O95071 2799 aaPredicted RBP6.22□□□□□ -1.41
ERCC1-216ENST00000592444 COL12A1Q99715 3063 aa6.21□□□□□ -1.42
ERCC1-216ENST00000592444 GLP2RO95838 553 aa6.21□□□□□ -1.42
ERCC1-216ENST00000592444 SNAI1O95863 264 aaPredicted RBP6.21□□□□□ -1.42
ERCC1-216ENST00000592444 IGKV5-2P06315 115 aa6.21□□□□□ -1.42
ERCC1-216ENST00000592444 ASNSP08243 561 aa6.21□□□□□ -1.42
ERCC1-216ENST00000592444 VARSP26640 1264 aaKnown RBP6.21□□□□□ -1.42
ERCC1-216ENST00000592444 HTRA4P83105 476 aaPredicted RBP6.21□□□□□ -1.42
ERCC1-216ENST00000592444 IFIT5Q13325 482 aaKnown RBP6.21□□□□□ -1.42
ERCC1-216ENST00000592444 PLS1Q14651 629 aa6.21□□□□□ -1.42
ERCC1-216ENST00000592444 NEUROD2Q15784 382 aa6.21□□□□□ -1.42
ERCC1-216ENST00000592444 ZNF792Q3KQV3 632 aa6.21□□□□□ -1.42
ERCC1-216ENST00000592444 IL31Q6EBC2 164 aa6.21□□□□□ -1.42
ERCC1-216ENST00000592444 LDHAL6AQ6ZMR3 332 aa6.21□□□□□ -1.42
ERCC1-216ENST00000592444 ZNF605Q86T29 641 aa6.21□□□□□ -1.42
ERCC1-216ENST00000592444 C1orf210Q8IVY1 113 aa6.21□□□□□ -1.42
ERCC1-216ENST00000592444 EFHBQ8N7U6 833 aa6.21□□□□□ -1.42
ERCC1-216ENST00000592444 ZNF511Q8NB15 262 aa6.21□□□□□ -1.42
ERCC1-216ENST00000592444 ZNF594Q96JF6 807 aaPredicted RBP6.21□□□□□ -1.42
ERCC1-216ENST00000592444 ERVK-5Q9HDB9 667 aa6.21□□□□□ -1.42
ERCC1-216ENST00000592444 CNNM1Q9NRU3 951 aa6.21□□□□□ -1.42
ERCC1-216ENST00000592444 SPTAN1Q13813 2472 aaKnown RBP6.2□□□□□ -1.42
ERCC1-216ENST00000592444 ABHD14A-ACY1A0A1B0GW23 586 aa6.2□□□□□ -1.42
ERCC1-216ENST00000592444 H7C1W4 665 aa6.2□□□□□ -1.42
ERCC1-216ENST00000592444 SPTLC1O15269 473 aa6.2□□□□□ -1.42
ERCC1-216ENST00000592444 C1QL1O75973 258 aa6.2□□□□□ -1.42
ERCC1-216ENST00000592444 GDF11O95390 407 aa6.2□□□□□ -1.42
ERCC1-216ENST00000592444 NTRK1P04629 796 aa6.2□□□□□ -1.42
ERCC1-216ENST00000592444 HOXD8P13378 290 aaPredicted RBP6.2□□□□□ -1.42
ERCC1-216ENST00000592444 PRDX5P30044 214 aa6.2□□□□□ -1.42
ERCC1-216ENST00000592444 DDX10Q13206 875 aaKnown RBP6.2□□□□□ -1.42
ERCC1-216ENST00000592444 ACVR2BQ13705 512 aa6.2□□□□□ -1.42
ERCC1-216ENST00000592444 GPNMBQ14956 572 aa6.2□□□□□ -1.42
ERCC1-216ENST00000592444 CWF19L2Q2TBE0 894 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms