RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412		B4DLN1	442 aa		21.4	■■□□□ 1.02
CIRBP-238	ENST00000592412	NBN	O60934	754 aa		21.4	■■□□□ 1.02
CIRBP-238	ENST00000592412	CXCL10	P02778	98 aa		21.4	■■□□□ 1.02
CIRBP-238	ENST00000592412	SELP	P16109	830 aa		21.4	■■□□□ 1.02
CIRBP-238	ENST00000592412	MRPL12	P52815	198 aa	Known RBP	21.4	■■□□□ 1.02
CIRBP-238	ENST00000592412	TRAF7	Q6Q0C0	670 aa		21.4	■■□□□ 1.02
CIRBP-238	ENST00000592412	LRRC8D	Q7L1W4	858 aa		21.4	■■□□□ 1.02
CIRBP-238	ENST00000592412	CHST3	Q7LGC8	479 aa		21.4	■■□□□ 1.02
CIRBP-238	ENST00000592412	WNT8B	Q93098	351 aa		21.4	■■□□□ 1.02
CIRBP-238	ENST00000592412	MAF1	Q9H063	256 aa		21.4	■■□□□ 1.02
CIRBP-238	ENST00000592412	GTF2IRD1	Q9UHL9	959 aa		21.4	■■□□□ 1.02
CIRBP-238	ENST00000592412	DDX41	Q9UJV9	622 aa	Known RBP	21.4	■■□□□ 1.02
CIRBP-238	ENST00000592412	COG5	Q9UP83	839 aa		21.4	■■□□□ 1.02
CIRBP-238	ENST00000592412	KIF28P	B7ZC32	967 aa		21.39	■■□□□ 1.01
CIRBP-238	ENST00000592412	QRICH1	Q2TAL8	776 aa		21.39	■■□□□ 1.01
CIRBP-238	ENST00000592412	CCDC155	Q8N6L0	562 aa		21.39	■■□□□ 1.01
CIRBP-238	ENST00000592412	NSUN6	Q8TEA1	469 aa	Known RBP	21.39	■■□□□ 1.01
CIRBP-238	ENST00000592412	ANKS1A	Q92625	1134 aa		21.39	■■□□□ 1.01
CIRBP-238	ENST00000592412	RMDN3	Q96TC7	470 aa		21.39	■■□□□ 1.01
CIRBP-238	ENST00000592412	RNF41	Q9H4P4	317 aa	Predicted RBP	21.39	■■□□□ 1.01
CIRBP-238	ENST00000592412	HDAC6	Q9UBN7	1215 aa		21.39	■■□□□ 1.01
CIRBP-238	ENST00000592412	ZBTB47	Q9UFB7	747 aa	Predicted RBP	21.39	■■□□□ 1.01
CIRBP-238	ENST00000592412	OPLAH	O14841	1288 aa		21.38	■■□□□ 1.01
CIRBP-238	ENST00000592412	KDM4A	O75164	1064 aa		21.38	■■□□□ 1.01
CIRBP-238	ENST00000592412	CKB	P12277	381 aa		21.38	■■□□□ 1.01
CIRBP-238	ENST00000592412	KCNJ6	P48051	423 aa		21.38	■■□□□ 1.01
CIRBP-238	ENST00000592412	STXBP2	Q15833	593 aa		21.38	■■□□□ 1.01
CIRBP-238	ENST00000592412	TRIM71	Q2Q1W2	868 aa	Known RBP	21.38	■■□□□ 1.01
CIRBP-238	ENST00000592412	GDPD5	Q8WTR4	605 aa		21.38	■■□□□ 1.01
CIRBP-238	ENST00000592412	EMID1	Q96A84	441 aa	Predicted RBP	21.38	■■□□□ 1.01
CIRBP-238	ENST00000592412	IWS1	Q96ST2	819 aa		21.38	■■□□□ 1.01
CIRBP-238	ENST00000592412	LNPK	Q9C0E8	428 aa		21.38	■■□□□ 1.01
CIRBP-238	ENST00000592412	EPHX3	Q9H6B9	360 aa		21.38	■■□□□ 1.01
CIRBP-238	ENST00000592412	TRIM6-TRIM34	B2RNG4	842 aa		21.37	■■□□□ 1.01
CIRBP-238	ENST00000592412	HAS3	O00219	553 aa		21.37	■■□□□ 1.01
CIRBP-238	ENST00000592412	EIF2AK2	P19525	551 aa	Known RBP	21.37	■■□□□ 1.01
CIRBP-238	ENST00000592412	SDS	P20132	328 aa		21.37	■■□□□ 1.01
CIRBP-238	ENST00000592412	CAST	P20810	708 aa	Known RBP	21.37	■■□□□ 1.01
CIRBP-238	ENST00000592412	PLA2G5	P39877	138 aa		21.37	■■□□□ 1.01
CIRBP-238	ENST00000592412	HIC1	Q14526	733 aa		21.37	■■□□□ 1.01
CIRBP-238	ENST00000592412	MBTPS1	Q14703	1052 aa		21.37	■■□□□ 1.01
CIRBP-238	ENST00000592412	CNKSR3	Q6P9H4	555 aa		21.37	■■□□□ 1.01
CIRBP-238	ENST00000592412	ENAH	Q8N8S7	591 aa	Predicted RBP	21.37	■■□□□ 1.01
CIRBP-238	ENST00000592412	KHSRP	Q92945	711 aa	Known RBP eCLIP	21.37	■■□□□ 1.01
CIRBP-238	ENST00000592412	HLA-C	Q95604	372 aa		21.37	■■□□□ 1.01
CIRBP-238	ENST00000592412	RILPL2	Q969X0	211 aa		21.37	■■□□□ 1.01
CIRBP-238	ENST00000592412	C1QTNF1	Q9BXJ1	281 aa		21.37	■■□□□ 1.01
CIRBP-238	ENST00000592412	JMJD4	Q9H9V9	463 aa		21.37	■■□□□ 1.01
CIRBP-238	ENST00000592412	ZNF213	O14771	459 aa		21.36	■■□□□ 1.01
CIRBP-238	ENST00000592412	RGS20	O76081	388 aa		21.36	■■□□□ 1.01
CIRBP-238	ENST00000592412	GJB5	O95377	273 aa		21.36	■■□□□ 1.01
CIRBP-238	ENST00000592412	F2	P00734	622 aa		21.36	■■□□□ 1.01
CIRBP-238	ENST00000592412	ZNF286B	P0CG31	522 aa		21.36	■■□□□ 1.01
CIRBP-238	ENST00000592412	PSEN2	P49810	448 aa		21.36	■■□□□ 1.01
CIRBP-238	ENST00000592412	DGKD	Q16760	1214 aa		21.36	■■□□□ 1.01
CIRBP-238	ENST00000592412	ASPRV1	Q53RT3	343 aa		21.36	■■□□□ 1.01
CIRBP-238	ENST00000592412	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	21.36	■■□□□ 1.01
CIRBP-238	ENST00000592412	KAT14	Q9H8E8	782 aa		21.36	■■□□□ 1.01
CIRBP-238	ENST00000592412	PXMP2	Q9NR77	195 aa		21.36	■■□□□ 1.01
CIRBP-238	ENST00000592412		B4E1Z4	1266 aa		21.35	■■□□□ 1.01
CIRBP-238	ENST00000592412	HOXD8	P13378	290 aa	Predicted RBP	21.35	■■□□□ 1.01
CIRBP-238	ENST00000592412	ZNF200	P98182	395 aa	Predicted RBP	21.35	■■□□□ 1.01
CIRBP-238	ENST00000592412	FBXO11	Q86XK2	927 aa		21.35	■■□□□ 1.01
CIRBP-238	ENST00000592412	MCF2L2	Q86YR7	1114 aa		21.35	■■□□□ 1.01
CIRBP-238	ENST00000592412	ALG1	Q9BT22	464 aa		21.35	■■□□□ 1.01
CIRBP-238	ENST00000592412	SUGCT	Q9HAC7	445 aa		21.35	■■□□□ 1.01
CIRBP-238	ENST00000592412	MYH6	P13533	1939 aa		21.35	■■□□□ 1.01
CIRBP-238	ENST00000592412	PPP1R11	O60927	126 aa	Predicted RBP	21.34	■■□□□ 1.01
CIRBP-238	ENST00000592412	EIF3J	O75822	258 aa	Known RBP	21.34	■■□□□ 1.01
CIRBP-238	ENST00000592412	NR3C2	P08235	984 aa		21.34	■■□□□ 1.01
CIRBP-238	ENST00000592412	HSD17B4	P51659	736 aa		21.34	■■□□□ 1.01
CIRBP-238	ENST00000592412	GHRHR	Q02643	423 aa		21.34	■■□□□ 1.01
CIRBP-238	ENST00000592412	PTK7	Q13308	1070 aa		21.34	■■□□□ 1.01
CIRBP-238	ENST00000592412	MKRN4P	Q13434	485 aa	Predicted RBP	21.34	■■□□□ 1.01
CIRBP-238	ENST00000592412	MFSD10	Q14728	455 aa		21.34	■■□□□ 1.01
CIRBP-238	ENST00000592412	ZNF618	Q5T7W0	954 aa		21.34	■■□□□ 1.01
CIRBP-238	ENST00000592412	ARHGEF16	Q5VV41	709 aa		21.34	■■□□□ 1.01
CIRBP-238	ENST00000592412	IQCA1	Q86XH1	822 aa		21.34	■■□□□ 1.01
CIRBP-238	ENST00000592412	STAG2	Q8N3U4	1231 aa		21.34	■■□□□ 1.01
CIRBP-238	ENST00000592412	C7orf31	Q8N865	590 aa		21.34	■■□□□ 1.01
CIRBP-238	ENST00000592412	PPTC7	Q8NI37	304 aa		21.34	■■□□□ 1.01
CIRBP-238	ENST00000592412	ZSWIM5	Q9P217	1185 aa		21.34	■■□□□ 1.01
CIRBP-238	ENST00000592412	MRPL11	Q9Y3B7	192 aa	Known RBP	21.34	■■□□□ 1.01
CIRBP-238	ENST00000592412	MRVI1	Q9Y6F6	885 aa		21.34	■■□□□ 1.01
CIRBP-238	ENST00000592412	LINC01553	A4QN01	128 aa		21.33	■■□□□ 1.01
CIRBP-238	ENST00000592412	PARN	O95453	639 aa	Known RBP	21.33	■■□□□ 1.01
CIRBP-238	ENST00000592412	MFAP1	P55081	439 aa	Known RBP	21.33	■■□□□ 1.01
CIRBP-238	ENST00000592412	ERVK-21	P61565	698 aa		21.33	■■□□□ 1.01
CIRBP-238	ENST00000592412	KIAA0753	Q2KHM9	967 aa		21.33	■■□□□ 1.01
CIRBP-238	ENST00000592412	RAD9A	Q99638	391 aa		21.33	■■□□□ 1.01
CIRBP-238	ENST00000592412	LRFN3	Q9BTN0	628 aa		21.33	■■□□□ 1.01
CIRBP-238	ENST00000592412	ZBED2	Q9BTP6	218 aa		21.33	■■□□□ 1.01
CIRBP-238	ENST00000592412	VAT1L	Q9HCJ6	419 aa		21.33	■■□□□ 1.01
CIRBP-238	ENST00000592412	C11orf16	Q9NQ32	467 aa		21.33	■■□□□ 1.01
CIRBP-238	ENST00000592412	LMCD1	Q9NZU5	365 aa		21.33	■■□□□ 1.01
CIRBP-238	ENST00000592412	MTUS1	Q9ULD2	1270 aa		21.33	■■□□□ 1.01
CIRBP-238	ENST00000592412	SI	P14410	1827 aa		21.32	■■□□□ 1
CIRBP-238	ENST00000592412	MYH7B	A7E2Y1	1941 aa		21.32	■■□□□ 1
CIRBP-238	ENST00000592412	ABHD14A-ACY1	A0A1B0GW23	586 aa		21.32	■■□□□ 1
CIRBP-238	ENST00000592412	CFB	P00751	764 aa		21.32	■■□□□ 1

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