RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 FPGSQ05932 587 aa17.54■□□□□ 0.4
ERCC1-213ENST00000592023 ARHGAP1Q07960 439 aa17.54■□□□□ 0.4
ERCC1-213ENST00000592023 SHHQ15465 462 aa17.54■□□□□ 0.4
ERCC1-213ENST00000592023 ZFP91Q96JP5 570 aaPredicted RBP17.54■□□□□ 0.4
ERCC1-213ENST00000592023 MTG1Q9BT17 334 aaPredicted RBP17.54■□□□□ 0.4
ERCC1-213ENST00000592023 SNX14Q9Y5W7 946 aa17.54■□□□□ 0.4
ERCC1-213ENST00000592023 KLF18A0A0U1RQI7 1052 aa17.53■□□□□ 0.4
ERCC1-213ENST00000592023 A6NJR5 290 aa17.53■□□□□ 0.4
ERCC1-213ENST00000592023 GOLGA8AA7E2F4 631 aa17.53■□□□□ 0.4
ERCC1-213ENST00000592023 GOLGA8BA8MQT2 603 aa17.53■□□□□ 0.4
ERCC1-213ENST00000592023 ZBTB43O43298 467 aa17.53■□□□□ 0.4
ERCC1-213ENST00000592023 B4GALT4O60513 344 aa17.53■□□□□ 0.4
ERCC1-213ENST00000592023 CD4P01730 458 aa17.53■□□□□ 0.4
ERCC1-213ENST00000592023 HMGB1P09429 215 aaKnown RBP17.53■□□□□ 0.4
ERCC1-213ENST00000592023 CCND2P30279 289 aa17.53■□□□□ 0.4
ERCC1-213ENST00000592023 EPHB4P54760 987 aa17.53■□□□□ 0.4
ERCC1-213ENST00000592023 FGD1P98174 961 aa17.53■□□□□ 0.4
ERCC1-213ENST00000592023 RTN1Q16799 776 aa17.53■□□□□ 0.4
ERCC1-213ENST00000592023 SMARCC2Q8TAQ2 1214 aa17.53■□□□□ 0.4
ERCC1-213ENST00000592023 PPP1R13LQ8WUF5 828 aa17.53■□□□□ 0.4
ERCC1-213ENST00000592023 AFG1LQ8WV93 481 aa17.53■□□□□ 0.4
ERCC1-213ENST00000592023 KCNB2Q92953 911 aa17.53■□□□□ 0.4
ERCC1-213ENST00000592023 CUL5Q93034 780 aa17.53■□□□□ 0.4
ERCC1-213ENST00000592023 NAP1L2Q9ULW6 460 aaPredicted RBP17.53■□□□□ 0.4
ERCC1-213ENST00000592023 SCN10AQ9Y5Y9 1956 aa17.53■□□□□ 0.4
ERCC1-213ENST00000592023 FRMPD4Q14CM0 1322 aa17.52■□□□□ 0.4
ERCC1-213ENST00000592023 RGS20O76081 388 aa17.52■□□□□ 0.4
ERCC1-213ENST00000592023 TIMP1P01033 207 aa17.52■□□□□ 0.4
ERCC1-213ENST00000592023 MMP3P08254 477 aa17.52■□□□□ 0.4
ERCC1-213ENST00000592023 FAM47CQ5HY64 1035 aa17.52■□□□□ 0.4
ERCC1-213ENST00000592023 USP17L6PQ6QN14 398 aa17.52■□□□□ 0.4
ERCC1-213ENST00000592023 BLOC1S2Q6QNY1 142 aa17.52■□□□□ 0.4
ERCC1-213ENST00000592023 HEATR3Q7Z4Q2 680 aa17.52■□□□□ 0.4
ERCC1-213ENST00000592023 GPKOWQ92917 476 aaPredicted RBP eCLIP17.52■□□□□ 0.4
ERCC1-213ENST00000592023 TRPV6Q9H1D0 765 aa17.52■□□□□ 0.4
ERCC1-213ENST00000592023 RBM28Q9NW13 759 aaKnown RBP17.52■□□□□ 0.4
ERCC1-213ENST00000592023 DDX41Q9UJV9 622 aaKnown RBP17.52■□□□□ 0.4
ERCC1-213ENST00000592023 SORBS3O60504 671 aa17.51■□□□□ 0.39
ERCC1-213ENST00000592023 KPNA6O60684 536 aa17.51■□□□□ 0.39
ERCC1-213ENST00000592023 CHMP4BP1P59074 171 aa17.51■□□□□ 0.39
ERCC1-213ENST00000592023 VSIG10LQ86VR7 867 aa17.51■□□□□ 0.39
ERCC1-213ENST00000592023 SEZ6LQ9BYH1 1024 aa17.51■□□□□ 0.39
ERCC1-213ENST00000592023 ALDH8A1Q9H2A2 487 aaPredicted RBP17.51■□□□□ 0.39
ERCC1-213ENST00000592023 HIPK3Q9H422 1215 aa17.51■□□□□ 0.39
ERCC1-213ENST00000592023 UMODL1Q5DID0 1318 aa17.5■□□□□ 0.39
ERCC1-213ENST00000592023 UBA1P22314 1058 aaKnown RBP17.5■□□□□ 0.39
ERCC1-213ENST00000592023 CYP2C18P33260 490 aa17.5■□□□□ 0.39
ERCC1-213ENST00000592023 APOBRQ0VD83 1088 aa17.5■□□□□ 0.39
ERCC1-213ENST00000592023 UBE2SQ16763 222 aa17.5■□□□□ 0.39
ERCC1-213ENST00000592023 NBPF20Q3BBV1 942 aa17.5■□□□□ 0.39
ERCC1-213ENST00000592023 ERICH6BQ5W0A0 696 aa17.5■□□□□ 0.39
ERCC1-213ENST00000592023 MFSD5Q6N075 450 aa17.5■□□□□ 0.39
ERCC1-213ENST00000592023 Q6ZUG5 572 aa17.5■□□□□ 0.39
ERCC1-213ENST00000592023 DHX37Q8IY37 1157 aaKnown RBP17.5■□□□□ 0.39
ERCC1-213ENST00000592023 RNPC3Q96LT9 517 aaKnown RBP17.5■□□□□ 0.39
ERCC1-213ENST00000592023 TRMT13Q9NUP7 481 aaKnown RBP17.5■□□□□ 0.39
ERCC1-213ENST00000592023 PIK3CDO00329 1044 aa17.49■□□□□ 0.39
ERCC1-213ENST00000592023 MEIS2O14770 477 aa17.49■□□□□ 0.39
ERCC1-213ENST00000592023 GGPS1O95749 300 aa17.49■□□□□ 0.39
ERCC1-213ENST00000592023 CSF2RAP15509 400 aa17.49■□□□□ 0.39
ERCC1-213ENST00000592023 CASTP20810 708 aaKnown RBP17.49■□□□□ 0.39
ERCC1-213ENST00000592023 RPS6KB1P23443 525 aa17.49■□□□□ 0.39
ERCC1-213ENST00000592023 WWC2Q6AWC2 1192 aa17.49■□□□□ 0.39
ERCC1-213ENST00000592023 TMEM199Q8N511 208 aa17.49■□□□□ 0.39
ERCC1-213ENST00000592023 BRF1Q92994 677 aa17.49■□□□□ 0.39
ERCC1-213ENST00000592023 PSTPIP2Q9H939 334 aa17.49■□□□□ 0.39
ERCC1-213ENST00000592023 MYH7BA7E2Y1 1941 aa17.49■□□□□ 0.39
ERCC1-213ENST00000592023 ZNF286BP0CG31 522 aa17.48■□□□□ 0.39
ERCC1-213ENST00000592023 CYP2C9P11712 490 aa17.48■□□□□ 0.39
ERCC1-213ENST00000592023 CDC27P30260 824 aa17.48■□□□□ 0.39
ERCC1-213ENST00000592023 METAP2P50579 478 aaKnown RBP eCLIP17.48■□□□□ 0.39
ERCC1-213ENST00000592023 MRPS9P82933 396 aaKnown RBP17.48■□□□□ 0.39
ERCC1-213ENST00000592023 FUT2Q10981 343 aa17.48■□□□□ 0.39
ERCC1-213ENST00000592023 PPIGQ13427 754 aaKnown RBP eCLIP17.48■□□□□ 0.391e-6■■■□□ 18.4
ERCC1-213ENST00000592023 LAMC2Q13753 1193 aa17.48■□□□□ 0.39
ERCC1-213ENST00000592023 DGKDQ16760 1214 aa17.48■□□□□ 0.39
ERCC1-213ENST00000592023 GNPTABQ3T906 1256 aa17.48■□□□□ 0.39
ERCC1-213ENST00000592023 KCNV1Q6PIU1 500 aa17.48■□□□□ 0.39
ERCC1-213ENST00000592023 Q7L0L9 218 aa17.48■□□□□ 0.39
ERCC1-213ENST00000592023 PPTC7Q8NI37 304 aa17.48■□□□□ 0.39
ERCC1-213ENST00000592023 EMID1Q96A84 441 aaPredicted RBP17.48■□□□□ 0.39
ERCC1-213ENST00000592023 NOC4LQ9BVI4 516 aaKnown RBP17.48■□□□□ 0.39
ERCC1-213ENST00000592023 RTEL1Q9NZ71 1219 aa17.48■□□□□ 0.39
ERCC1-213ENST00000592023 LAMA3Q16787 3333 aa17.47■□□□□ 0.39
ERCC1-213ENST00000592023 PSMA5P28066 241 aa17.47■□□□□ 0.39
ERCC1-213ENST00000592023 RCAN1P53805 252 aa17.47■□□□□ 0.39
ERCC1-213ENST00000592023 NAPAP54920 295 aa17.47■□□□□ 0.39
ERCC1-213ENST00000592023 CCL23P55773 120 aa17.47■□□□□ 0.39
ERCC1-213ENST00000592023 SP2Q02086 613 aa17.47■□□□□ 0.39
ERCC1-213ENST00000592023 CELF3Q5SZQ8 465 aaKnown RBP17.47■□□□□ 0.39
ERCC1-213ENST00000592023 NFRKBQ6P4R8 1299 aa17.47■□□□□ 0.39
ERCC1-213ENST00000592023 SPATA33Q96N06 139 aa17.47■□□□□ 0.39
ERCC1-213ENST00000592023 INPP4AQ96PE3 977 aaPredicted RBP17.47■□□□□ 0.39
ERCC1-213ENST00000592023 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.47■□□□□ 0.393e-7■■□□□ 11.7
ERCC1-213ENST00000592023 WNT8AQ9H1J5 351 aa17.47■□□□□ 0.39
ERCC1-213ENST00000592023 FAM217BQ9NTX9 383 aaPredicted RBP17.47■□□□□ 0.39
ERCC1-213ENST00000592023 TANC1Q9C0D5 1861 aa17.47■□□□□ 0.39
ERCC1-213ENST00000592023 DOCK5Q9H7D0 1870 aa17.47■□□□□ 0.39
ERCC1-213ENST00000592023 FIBPO43427 364 aa17.46■□□□□ 0.39
ERCC1-213ENST00000592023 STAM2O75886 525 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms