RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 SLC34A2O95436 690 aa31.41■■■□□ 2.62
SMAD4-213ENST00000591914 LY6KQ17RY6 165 aa31.41■■■□□ 2.62
SMAD4-213ENST00000591914 AGXT2Q9BYV1 514 aa31.41■■■□□ 2.62
SMAD4-213ENST00000591914 FAM217BQ9NTX9 383 aaPredicted RBP31.41■■■□□ 2.62
SMAD4-213ENST00000591914 GRIN2DO15399 1336 aa31.41■■■□□ 2.62
SMAD4-213ENST00000591914 GOLGA8AA7E2F4 631 aa31.4■■■□□ 2.62
SMAD4-213ENST00000591914 GOLGA8BA8MQT2 603 aa31.4■■■□□ 2.62
SMAD4-213ENST00000591914 MEIS2O14770 477 aa31.4■■■□□ 2.62
SMAD4-213ENST00000591914 MYCLP12524 364 aaPredicted RBP31.4■■■□□ 2.62
SMAD4-213ENST00000591914 CASTP20810 708 aaKnown RBP31.4■■■□□ 2.62
SMAD4-213ENST00000591914 PURAQ00577 322 aaKnown RBP31.4■■■□□ 2.62
SMAD4-213ENST00000591914 ITGA7Q13683 1181 aa31.4■■■□□ 2.62
SMAD4-213ENST00000591914 BRDTQ58F21 947 aaPredicted RBP31.4■■■□□ 2.62
SMAD4-213ENST00000591914 FAM126BQ8IXS8 530 aa31.4■■■□□ 2.62
SMAD4-213ENST00000591914 BRF1Q92994 677 aa31.4■■■□□ 2.62
SMAD4-213ENST00000591914 SEZ6LQ9BYH1 1024 aa31.4■■■□□ 2.62
SMAD4-213ENST00000591914 TMEM39AQ9NV64 488 aa31.4■■■□□ 2.62
SMAD4-213ENST00000591914 CCND2P30279 289 aa31.39■■■□□ 2.62
SMAD4-213ENST00000591914 ARHGAP1Q07960 439 aa31.39■■■□□ 2.62
SMAD4-213ENST00000591914 APOBRQ0VD83 1088 aa31.39■■■□□ 2.62
SMAD4-213ENST00000591914 USP17L6PQ6QN14 398 aa31.39■■■□□ 2.62
SMAD4-213ENST00000591914 TDHQ8IZJ6 230 aa31.39■■■□□ 2.62
SMAD4-213ENST00000591914 DDX41Q9UJV9 622 aaKnown RBP31.39■■■□□ 2.62
SMAD4-213ENST00000591914 TBX21Q9UL17 535 aa31.39■■■□□ 2.62
SMAD4-213ENST00000591914 GH1P01241 217 aa31.38■■■□□ 2.61
SMAD4-213ENST00000591914 ITGB8P26012 769 aa31.38■■■□□ 2.61
SMAD4-213ENST00000591914 CDC27P30260 824 aa31.38■■■□□ 2.61
SMAD4-213ENST00000591914 SMARCC2Q8TAQ2 1214 aa31.38■■■□□ 2.61
SMAD4-213ENST00000591914 BADQ92934 168 aa31.38■■■□□ 2.61
SMAD4-213ENST00000591914 CUL5Q93034 780 aa31.38■■■□□ 2.61
SMAD4-213ENST00000591914 MRVI1Q9Y6F6 885 aa31.38■■■□□ 2.61
SMAD4-213ENST00000591914 KPNA6O60684 536 aa31.37■■■□□ 2.61
SMAD4-213ENST00000591914 MYL3P08590 195 aa31.37■■■□□ 2.61
SMAD4-213ENST00000591914 PSMC6P62333 389 aa31.37■■■□□ 2.61
SMAD4-213ENST00000591914 MTG1Q9BT17 334 aaPredicted RBP31.37■■■□□ 2.61
SMAD4-213ENST00000591914 PSTPIP2Q9H939 334 aa31.37■■■□□ 2.61
SMAD4-213ENST00000591914 ZSWIM6Q9HCJ5 1215 aa31.37■■■□□ 2.61
SMAD4-213ENST00000591914 NID2Q14112 1375 aa31.37■■■□□ 2.61
SMAD4-213ENST00000591914 CD4P01730 458 aa31.36■■■□□ 2.61
SMAD4-213ENST00000591914 METAP2P50579 478 aaKnown RBP eCLIP31.36■■■□□ 2.61
SMAD4-213ENST00000591914 KCNV1Q6PIU1 500 aa31.36■■■□□ 2.61
SMAD4-213ENST00000591914 RUFY3Q7L099 469 aa31.36■■■□□ 2.61
SMAD4-213ENST00000591914 HEATR3Q7Z4Q2 680 aa31.36■■■□□ 2.61
SMAD4-213ENST00000591914 GPKOWQ92917 476 aaPredicted RBP eCLIP31.36■■■□□ 2.61
SMAD4-213ENST00000591914 EMID1Q96A84 441 aaPredicted RBP31.36■■■□□ 2.61
SMAD4-213ENST00000591914 NAP1L2Q9ULW6 460 aaPredicted RBP31.36■■■□□ 2.61
SMAD4-213ENST00000591914 TLR3O15455 904 aaKnown RBP31.35■■■□□ 2.61
SMAD4-213ENST00000591914 RAG1P15918 1043 aa31.35■■■□□ 2.61
SMAD4-213ENST00000591914 AFG1LQ8WV93 481 aa31.35■■■□□ 2.61
SMAD4-213ENST00000591914 TM6SF1Q9BZW5 370 aa31.35■■■□□ 2.61
SMAD4-213ENST00000591914 V9GY48 417 aaPredicted RBP31.35■■■□□ 2.61
SMAD4-213ENST00000591914 SCN10AQ9Y5Y9 1956 aa31.35■■■□□ 2.61
SMAD4-213ENST00000591914 SZT2Q5T011 3432 aa31.35■■■□□ 2.61
SMAD4-213ENST00000591914 CCDC196A0A1B0GTZ2 297 aa31.34■■■□□ 2.61
SMAD4-213ENST00000591914 STAM2O75886 525 aa31.34■■■□□ 2.61
SMAD4-213ENST00000591914 MRPS9P82933 396 aaKnown RBP31.34■■■□□ 2.61
SMAD4-213ENST00000591914 WWC2Q6AWC2 1192 aa31.34■■■□□ 2.61
SMAD4-213ENST00000591914 MMP3P08254 477 aa31.33■■■□□ 2.61
SMAD4-213ENST00000591914 TGFB3P10600 412 aa31.33■■■□□ 2.61
SMAD4-213ENST00000591914 ADD1P35611 737 aaKnown RBP31.33■■■□□ 2.61
SMAD4-213ENST00000591914 EVCP57679 992 aa31.33■■■□□ 2.61
SMAD4-213ENST00000591914 ZFP91Q96JP5 570 aaPredicted RBP31.33■■■□□ 2.61
SMAD4-213ENST00000591914 INPP4AQ96PE3 977 aaPredicted RBP31.33■■■□□ 2.61
SMAD4-213ENST00000591914 TIMP1P01033 207 aa31.32■■■□□ 2.6
SMAD4-213ENST00000591914 LAMC2Q13753 1193 aa31.32■■■□□ 2.6
SMAD4-213ENST00000591914 LRIT3Q3SXY7 679 aa31.32■■■□□ 2.6
SMAD4-213ENST00000591914 PCNX4Q63HM2 1172 aa31.32■■■□□ 2.6
SMAD4-213ENST00000591914 XRRA1Q6P2D8 792 aa31.32■■■□□ 2.6
SMAD4-213ENST00000591914 CYP46A1Q9Y6A2 500 aa31.32■■■□□ 2.6
SMAD4-213ENST00000591914 hCG_1984214I3L0E3 225 aa31.31■■■□□ 2.6
SMAD4-213ENST00000591914 TYW1BQ6NUM6 668 aa31.31■■■□□ 2.6
SMAD4-213ENST00000591914 PPP1R18Q6NYC8 613 aa31.31■■■□□ 2.6
SMAD4-213ENST00000591914 TEX2Q8IWB9 1127 aa31.31■■■□□ 2.6
SMAD4-213ENST00000591914 DHX37Q8IY37 1157 aaKnown RBP31.31■■■□□ 2.6
SMAD4-213ENST00000591914 ZNF713Q8N859 430 aaPredicted RBP31.31■■■□□ 2.6
SMAD4-213ENST00000591914 ALDH8A1Q9H2A2 487 aaPredicted RBP31.31■■■□□ 2.6
SMAD4-213ENST00000591914 SOX1O00570 391 aaPredicted RBP31.3■■■□□ 2.6
SMAD4-213ENST00000591914 SP2Q02086 613 aa31.3■■■□□ 2.6
SMAD4-213ENST00000591914 TOB2Q14106 344 aaPredicted RBP31.3■■■□□ 2.6
SMAD4-213ENST00000591914 UBE2SQ16763 222 aa31.3■■■□□ 2.6
SMAD4-213ENST00000591914 GNPTABQ3T906 1256 aa31.3■■■□□ 2.6
SMAD4-213ENST00000591914 PPTC7Q8NI37 304 aa31.3■■■□□ 2.6
SMAD4-213ENST00000591914 TRPV6Q9H1D0 765 aa31.3■■■□□ 2.6
SMAD4-213ENST00000591914 STXBP3O00186 592 aa31.29■■■□□ 2.6
SMAD4-213ENST00000591914 B4GALT4O60513 344 aa31.29■■■□□ 2.6
SMAD4-213ENST00000591914 UBA1P22314 1058 aaKnown RBP31.29■■■□□ 2.6
SMAD4-213ENST00000591914 ICAM3P32942 547 aa31.29■■■□□ 2.6
SMAD4-213ENST00000591914 NAPAP54920 295 aa31.29■■■□□ 2.6
SMAD4-213ENST00000591914 NBPF20Q3BBV1 942 aa31.29■■■□□ 2.6
SMAD4-213ENST00000591914 CELF3Q5SZQ8 465 aaKnown RBP31.29■■■□□ 2.6
SMAD4-213ENST00000591914 MYSM1Q5VVJ2 828 aa31.29■■■□□ 2.6
SMAD4-213ENST00000591914 BARHL2Q9NY43 387 aa31.29■■■□□ 2.6
SMAD4-213ENST00000591914 MYH7BA7E2Y1 1941 aa31.29■■■□□ 2.6
SMAD4-213ENST00000591914 PDIA3P30101 505 aaKnown RBP31.28■■■□□ 2.6
SMAD4-213ENST00000591914 DGKDQ16760 1214 aa31.28■■■□□ 2.6
SMAD4-213ENST00000591914 NFRKBQ6P4R8 1299 aa31.28■■■□□ 2.6
SMAD4-213ENST00000591914 RIC8AQ9NPQ8 531 aa31.28■■■□□ 2.6
SMAD4-213ENST00000591914 SPATA31C2B4DYI2 1134 aa31.27■■■□□ 2.6
SMAD4-213ENST00000591914 GGPS1O95749 300 aa31.27■■■□□ 2.6
SMAD4-213ENST00000591914 HOXD8P13378 290 aaPredicted RBP31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms