RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 GMPSP49915 693 aaPredicted RBP11.62□□□□□ -0.55
VPS25-206ENST00000591584 SHROOM1Q2M3G4 852 aaPredicted RBP11.62□□□□□ -0.55
VPS25-206ENST00000591584 ARMCX5Q6P1M9 558 aa11.62□□□□□ -0.55
VPS25-206ENST00000591584 PPFIBP1Q86W92 1011 aa11.62□□□□□ -0.55
VPS25-206ENST00000591584 MICALL2Q8IY33 904 aa11.62□□□□□ -0.55
VPS25-206ENST00000591584 TRMT44Q8IYL2 757 aaKnown RBP11.62□□□□□ -0.55
VPS25-206ENST00000591584 TEPSINQ96N21 525 aa11.62□□□□□ -0.55
VPS25-206ENST00000591584 ZNF341Q9BYN7 854 aa11.62□□□□□ -0.55
VPS25-206ENST00000591584 PPP1R1BQ9UD71 204 aaPredicted RBP11.62□□□□□ -0.55
VPS25-206ENST00000591584 PITPNM2Q9BZ72 1349 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 FER1L6Q2WGJ9 1857 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 N4BP3O15049 544 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 ZSCAN12O43309 604 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 ICAM1P05362 532 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 PBX1P40424 430 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 STX17P56962 302 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 SETQ01105 290 aaPredicted RBP11.61□□□□□ -0.55
VPS25-206ENST00000591584 GHRHRQ02643 423 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 R3HDM1Q15032 1099 aaKnown RBP11.61□□□□□ -0.55
VPS25-206ENST00000591584 KIF4BQ2VIQ3 1234 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 USH1GQ495M9 461 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 TCP11X2Q5H9J9 407 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 APTXQ7Z2E3 356 aaKnown RBP11.61□□□□□ -0.55
VPS25-206ENST00000591584 KRT26Q7Z3Y9 468 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 SPICE1Q8N0Z3 855 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 CCAR2Q8N163 923 aaKnown RBP11.61□□□□□ -0.55
VPS25-206ENST00000591584 GUF1Q8N442 669 aaKnown RBP11.61□□□□□ -0.55
VPS25-206ENST00000591584 ETNPPLQ8TBG4 499 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 P2RX5Q93086 422 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 PANX2Q96RD6 677 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 FEZ1Q99689 392 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 SLF1Q9BQI6 1058 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 POLR3CQ9BUI4 534 aaPredicted RBP11.61□□□□□ -0.55
VPS25-206ENST00000591584 WDR18Q9BV38 432 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 ZNF112Q9UJU3 913 aa11.61□□□□□ -0.55
VPS25-206ENST00000591584 R3HCC1Q9Y3T6 440 aaKnown RBP11.61□□□□□ -0.55
VPS25-206ENST00000591584 A0A1W2PQC6 194 aa11.6□□□□□ -0.55
VPS25-206ENST00000591584 KCNJ18B7U540 433 aa11.6□□□□□ -0.55
VPS25-206ENST00000591584 AKR1B15C9JRZ8 316 aaPredicted RBP11.6□□□□□ -0.55
VPS25-206ENST00000591584 RPA1P27694 616 aa11.6□□□□□ -0.55
VPS25-206ENST00000591584 COPB1P53618 953 aaKnown RBP11.6□□□□□ -0.55
VPS25-206ENST00000591584 LRRC63Q05C16 580 aa11.6□□□□□ -0.55
VPS25-206ENST00000591584 KCNJ12Q14500 433 aa11.6□□□□□ -0.55
VPS25-206ENST00000591584 PTPN14Q15678 1187 aa11.6□□□□□ -0.55
VPS25-206ENST00000591584 PRR16Q569H4 304 aa11.6□□□□□ -0.55
VPS25-206ENST00000591584 NIPA1Q7RTP0 329 aa11.6□□□□□ -0.55
VPS25-206ENST00000591584 CNGA4Q8IV77 575 aa11.6□□□□□ -0.55
VPS25-206ENST00000591584 CCDC65Q8IXS2 484 aa11.6□□□□□ -0.55
VPS25-206ENST00000591584 SMYD4Q8IYR2 804 aaPredicted RBP11.6□□□□□ -0.55
VPS25-206ENST00000591584 KIFC2Q96AC6 838 aa11.6□□□□□ -0.55
VPS25-206ENST00000591584 PLIN2Q99541 437 aa11.6□□□□□ -0.55
VPS25-206ENST00000591584 TSG101Q99816 390 aa11.6□□□□□ -0.55
VPS25-206ENST00000591584 NUP58Q9BVL2 599 aa11.6□□□□□ -0.55
VPS25-206ENST00000591584 HACL1Q9UJ83 578 aa11.6□□□□□ -0.55
VPS25-206ENST00000591584 DNM3Q9UQ16 869 aa11.6□□□□□ -0.55
VPS25-206ENST00000591584 GDAQ9Y2T3 454 aa11.6□□□□□ -0.55
VPS25-206ENST00000591584 POTEMA6NI47 508 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 MYMKA6NI61 221 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 C19orf81C9J6K1 198 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 ZBED4O75132 1171 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 TNNT1P13805 278 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 DNM2P50570 870 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 MCM6Q14566 821 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 KRT31Q15323 416 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 SUPT20HL1Q3ZLR7 823 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 CENPPQ6IPU0 288 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 TTI2Q6NXR4 508 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 LDHDQ86WU2 507 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 GPC2Q8N158 579 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 RETREG2Q8NC44 543 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 TRIM47Q96LD4 638 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 BAG1Q99933 345 aaPredicted RBP11.59□□□□□ -0.55
VPS25-206ENST00000591584 WDR11Q9BZH6 1224 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 TUFT1Q9NNX1 390 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 INTS13Q9NVM9 706 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 CTDP1Q9Y5B0 961 aaPredicted RBP11.59□□□□□ -0.55
VPS25-206ENST00000591584 GJA3Q9Y6H8 435 aa11.59□□□□□ -0.55
VPS25-206ENST00000591584 OPLAHO14841 1288 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 MSH4O15457 936 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 CFBP00751 764 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 PLA2G4BP0C869 781 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 BCRP11274 1271 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 LMNB1P20700 586 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 HSD17B4P51659 736 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 EHHADHQ08426 723 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 STK4Q13043 487 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 ARID5BQ14865 1188 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 CEP55Q53EZ4 464 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 KIAA1755Q5JYT7 1200 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 CCDC174Q6PII3 467 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 NYAP1Q6ZVC0 841 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 SCYL3Q8IZE3 742 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 CSGALNACT2Q8N6G5 542 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 SYT2Q8N9I0 419 aaPredicted RBP11.58□□□□□ -0.56
VPS25-206ENST00000591584 MYRIPQ8NFW9 859 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 NEK9Q8TD19 979 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 DDX12PQ92771 950 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 LENG9Q96B70 501 aa11.58□□□□□ -0.56
VPS25-206ENST00000591584 SRRTQ9BXP5 876 aaKnown RBP11.58□□□□□ -0.56
VPS25-206ENST00000591584 KIAA1024Q9UPX6 916 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms