RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 WWC2Q6AWC2 1192 aa25.76■■□□□ 1.71
MBD3-208ENST00000590830 TYW1BQ6NUM6 668 aa25.76■■□□□ 1.71
MBD3-208ENST00000590830 HEATR3Q7Z4Q2 680 aa25.76■■□□□ 1.71
MBD3-208ENST00000590830 PSTPIP2Q9H939 334 aa25.76■■□□□ 1.71
MBD3-208ENST00000590830 CYP46A1Q9Y6A2 500 aa25.76■■□□□ 1.71
MBD3-208ENST00000590830 FRMPD4Q14CM0 1322 aa25.76■■□□□ 1.71
MBD3-208ENST00000590830 A6NJR5 290 aa25.75■■□□□ 1.71
MBD3-208ENST00000590830 ARVCFO00192 962 aa25.75■■□□□ 1.71
MBD3-208ENST00000590830 ZEB2O60315 1214 aa25.75■■□□□ 1.71
MBD3-208ENST00000590830 PDIA3P30101 505 aaKnown RBP25.75■■□□□ 1.71
MBD3-208ENST00000590830 BMP8BP34820 402 aa25.75■■□□□ 1.71
MBD3-208ENST00000590830 MRPS9P82933 396 aaKnown RBP25.75■■□□□ 1.71
MBD3-208ENST00000590830 MDM2Q00987 491 aaPredicted RBP25.75■■□□□ 1.71
MBD3-208ENST00000590830 ARHGAP1Q07960 439 aa25.75■■□□□ 1.71
MBD3-208ENST00000590830 FAAP100Q0VG06 881 aa25.75■■□□□ 1.71
MBD3-208ENST00000590830 SLC43A3Q8NBI5 491 aa25.75■■□□□ 1.71
MBD3-208ENST00000590830 TOX2Q96NM4 488 aa25.75■■□□□ 1.71
MBD3-208ENST00000590830 PRDM5Q9NQX1 630 aaPredicted RBP25.75■■□□□ 1.71
MBD3-208ENST00000590830 NID2Q14112 1375 aa25.74■■□□□ 1.71
MBD3-208ENST00000590830 A0A0U1RQG5 324 aaPredicted RBP25.74■■□□□ 1.71
MBD3-208ENST00000590830 ITGB8P26012 769 aa25.74■■□□□ 1.71
MBD3-208ENST00000590830 CCND2P30279 289 aa25.74■■□□□ 1.71
MBD3-208ENST00000590830 PSMC6P62333 389 aa25.74■■□□□ 1.71
MBD3-208ENST00000590830 SMARCC2Q8TAQ2 1214 aa25.74■■□□□ 1.71
MBD3-208ENST00000590830 LARP6Q9BRS8 491 aaKnown RBP25.74■■□□□ 1.71
MBD3-208ENST00000590830 CABYRO75952 493 aa25.73■■□□□ 1.71
MBD3-208ENST00000590830 CPT1AP50416 773 aa25.73■■□□□ 1.71
MBD3-208ENST00000590830 PURAQ00577 322 aaKnown RBP25.73■■□□□ 1.71
MBD3-208ENST00000590830 UBE2SQ16763 222 aa25.73■■□□□ 1.71
MBD3-208ENST00000590830 CUL5Q93034 780 aa25.73■■□□□ 1.71
MBD3-208ENST00000590830 GH1P01241 217 aa25.72■■□□□ 1.71
MBD3-208ENST00000590830 MYL3P08590 195 aa25.72■■□□□ 1.71
MBD3-208ENST00000590830 CLTBP09497 229 aa25.72■■□□□ 1.71
MBD3-208ENST00000590830 SP2Q02086 613 aa25.72■■□□□ 1.71
MBD3-208ENST00000590830 ITGA7Q13683 1181 aa25.72■■□□□ 1.71
MBD3-208ENST00000590830 NTRK3Q16288 839 aa25.72■■□□□ 1.71
MBD3-208ENST00000590830 AFG1LQ8WV93 481 aa25.72■■□□□ 1.71
MBD3-208ENST00000590830 PRKAG2Q9UGJ0 569 aa25.72■■□□□ 1.71
MBD3-208ENST00000590830 MRVI1Q9Y6F6 885 aa25.72■■□□□ 1.71
MBD3-208ENST00000590830 TRIOBPQ9H2D6 2365 aa25.71■■□□□ 1.71
MBD3-208ENST00000590830 CCDC196A0A1B0GTZ2 297 aa25.71■■□□□ 1.71
MBD3-208ENST00000590830 STXBP3O00186 592 aa25.71■■□□□ 1.71
MBD3-208ENST00000590830 KIAA0355O15063 1070 aa25.71■■□□□ 1.71
MBD3-208ENST00000590830 CCT2P78371 535 aaKnown RBP25.71■■□□□ 1.71
MBD3-208ENST00000590830 FAM126BQ8IXS8 530 aa25.71■■□□□ 1.71
MBD3-208ENST00000590830 NCOA5Q9HCD5 579 aaKnown RBP25.71■■□□□ 1.71
MBD3-208ENST00000590830 POLR3EQ9NVU0 708 aa25.71■■□□□ 1.71
MBD3-208ENST00000590830 DCDC2CA8MYV0 355 aa25.7■■□□□ 1.7
MBD3-208ENST00000590830 PKN1Q16512 942 aa25.7■■□□□ 1.7
MBD3-208ENST00000590830 BADQ92934 168 aa25.7■■□□□ 1.7
MBD3-208ENST00000590830 BCAS3Q9H6U6 928 aa25.7■■□□□ 1.7
MBD3-208ENST00000590830 PDRG1Q9NUG6 133 aa25.7■■□□□ 1.7
MBD3-208ENST00000590830 TMEM39AQ9NV64 488 aa25.7■■□□□ 1.7
MBD3-208ENST00000590830 BARHL2Q9NY43 387 aa25.7■■□□□ 1.7
MBD3-208ENST00000590830 RTEL1Q9NZ71 1219 aa25.7■■□□□ 1.7
MBD3-208ENST00000590830 PPFIA3O75145 1194 aa25.69■■□□□ 1.7
MBD3-208ENST00000590830 CD4P01730 458 aa25.69■■□□□ 1.7
MBD3-208ENST00000590830 NAPAP54920 295 aa25.69■■□□□ 1.7
MBD3-208ENST00000590830 SEMA3FQ13275 785 aa25.69■■□□□ 1.7
MBD3-208ENST00000590830 PFKFB3Q16875 520 aaPredicted RBP25.69■■□□□ 1.7
MBD3-208ENST00000590830 PPP1R13LQ8WUF5 828 aa25.69■■□□□ 1.7
MBD3-208ENST00000590830 PHKBQ93100 1093 aa25.69■■□□□ 1.7
MBD3-208ENST00000590830 EMID1Q96A84 441 aaPredicted RBP25.69■■□□□ 1.7
MBD3-208ENST00000590830 INPP4AQ96PE3 977 aaPredicted RBP25.69■■□□□ 1.7
MBD3-208ENST00000590830 LBHD1Q9BQE6 289 aaPredicted RBP25.69■■□□□ 1.7
MBD3-208ENST00000590830 MTG1Q9BT17 334 aaPredicted RBP25.69■■□□□ 1.7
MBD3-208ENST00000590830 UBE2OQ9C0C9 1292 aaKnown RBP25.69■■□□□ 1.7
MBD3-208ENST00000590830 RIC8AQ9NPQ8 531 aa25.69■■□□□ 1.7
MBD3-208ENST00000590830 TBX21Q9UL17 535 aa25.69■■□□□ 1.7
MBD3-208ENST00000590830 PRPF3O43395 683 aaKnown RBP25.68■■□□□ 1.7
MBD3-208ENST00000590830 FXR1P51114 621 aaKnown RBP eCLIP25.68■■□□□ 1.7
MBD3-208ENST00000590830 ANAPC15P60006 121 aa25.68■■□□□ 1.7
MBD3-208ENST00000590830 MYSM1Q5VVJ2 828 aa25.68■■□□□ 1.7
MBD3-208ENST00000590830 PCNX4Q63HM2 1172 aa25.68■■□□□ 1.7
MBD3-208ENST00000590830 IL17RAQ96F46 866 aa25.68■■□□□ 1.7
MBD3-208ENST00000590830 PCDHA6Q9UN73 950 aa25.68■■□□□ 1.7
MBD3-208ENST00000590830 PCDHA8Q9Y5H6 950 aa25.68■■□□□ 1.7
MBD3-208ENST00000590830 KIAA1217Q5T5P2 1943 aa25.68■■□□□ 1.7
MBD3-208ENST00000590830 MROH7Q68CQ1 1323 aa25.67■■□□□ 1.7
MBD3-208ENST00000590830 SPATA31C2B4DYI2 1134 aa25.67■■□□□ 1.7
MBD3-208ENST00000590830 SORBS3O60504 671 aa25.67■■□□□ 1.7
MBD3-208ENST00000590830 KPNA6O60684 536 aa25.67■■□□□ 1.7
MBD3-208ENST00000590830 MMP3P08254 477 aa25.67■■□□□ 1.7
MBD3-208ENST00000590830 TGFB3P10600 412 aa25.67■■□□□ 1.7
MBD3-208ENST00000590830 ICAM3P32942 547 aa25.67■■□□□ 1.7
MBD3-208ENST00000590830 LAMC2Q13753 1193 aa25.67■■□□□ 1.7
MBD3-208ENST00000590830 BRDTQ58F21 947 aaPredicted RBP25.67■■□□□ 1.7
MBD3-208ENST00000590830 CELF3Q5SZQ8 465 aaKnown RBP25.67■■□□□ 1.7
MBD3-208ENST00000590830 PPP1R18Q6NYC8 613 aa25.67■■□□□ 1.7
MBD3-208ENST00000590830 KCNV1Q6PIU1 500 aa25.67■■□□□ 1.7
MBD3-208ENST00000590830 DHX37Q8IY37 1157 aaKnown RBP25.67■■□□□ 1.7
MBD3-208ENST00000590830 ZNF274Q96GC6 653 aaPredicted RBP25.67■■□□□ 1.7
MBD3-208ENST00000590830 TRPV6Q9H1D0 765 aa25.67■■□□□ 1.7
MBD3-208ENST00000590830 A0A1W2PPC1 479 aa25.66■■□□□ 1.7
MBD3-208ENST00000590830 SMCO2A6NFE2 343 aa25.66■■□□□ 1.7
MBD3-208ENST00000590830 ADAMTS3O15072 1205 aa25.66■■□□□ 1.7
MBD3-208ENST00000590830 STAM2O75886 525 aa25.66■■□□□ 1.7
MBD3-208ENST00000590830 SCG2P13521 617 aa25.66■■□□□ 1.7
MBD3-208ENST00000590830 IFNAR1P17181 557 aa25.66■■□□□ 1.7
MBD3-208ENST00000590830 UBA1P22314 1058 aaKnown RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms