RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 LRRC37A2A6NM11 1700 aa16.14■□□□□ 0.17
SCAMP4-212ENST00000590266 LCTP09848 1927 aa16.13■□□□□ 0.17
SCAMP4-212ENST00000590266 FRMPD3Q5JV73 1810 aa16.13■□□□□ 0.17
SCAMP4-212ENST00000590266 SPDYE3A6NKU9 549 aa16.13■□□□□ 0.17
SCAMP4-212ENST00000590266 STXBP3O00186 592 aa16.13■□□□□ 0.17
SCAMP4-212ENST00000590266 NKRFO15226 690 aaKnown RBP eCLIP16.13■□□□□ 0.17
SCAMP4-212ENST00000590266 ADCY7P51828 1080 aa16.13■□□□□ 0.17
SCAMP4-212ENST00000590266 CHMP4BP1P59074 171 aa16.13■□□□□ 0.17
SCAMP4-212ENST00000590266 TYW1BQ6NUM6 668 aa16.13■□□□□ 0.17
SCAMP4-212ENST00000590266 VSIG10LQ86VR7 867 aa16.13■□□□□ 0.17
SCAMP4-212ENST00000590266 BARHL2Q9NY43 387 aa16.13■□□□□ 0.17
SCAMP4-212ENST00000590266 PRKAG2Q9UGJ0 569 aa16.13■□□□□ 0.17
SCAMP4-212ENST00000590266 Q9Y3F1 56 aa16.13■□□□□ 0.17
SCAMP4-212ENST00000590266 NID2Q14112 1375 aa16.13■□□□□ 0.17
SCAMP4-212ENST00000590266 SMCHD1A6NHR9 2005 aa16.12■□□□□ 0.17
SCAMP4-212ENST00000590266 SMCO2A6NFE2 343 aa16.12■□□□□ 0.17
SCAMP4-212ENST00000590266 PIK3CDO00329 1044 aa16.12■□□□□ 0.17
SCAMP4-212ENST00000590266 GH1P01241 217 aa16.12■□□□□ 0.17
SCAMP4-212ENST00000590266 SCG2P13521 617 aa16.12■□□□□ 0.17
SCAMP4-212ENST00000590266 CPT1AP50416 773 aa16.12■□□□□ 0.17
SCAMP4-212ENST00000590266 PSMC6P62333 389 aa16.12■□□□□ 0.17
SCAMP4-212ENST00000590266 PFKFB3Q16875 520 aaPredicted RBP16.12■□□□□ 0.17
SCAMP4-212ENST00000590266 BRDTQ58F21 947 aaPredicted RBP16.12■□□□□ 0.17
SCAMP4-212ENST00000590266 PPP1R18Q6NYC8 613 aa16.12■□□□□ 0.17
SCAMP4-212ENST00000590266 PGBD1Q96JS3 809 aa16.12■□□□□ 0.17
SCAMP4-212ENST00000590266 A0A0U1RQG5 324 aaPredicted RBP16.11■□□□□ 0.17
SCAMP4-212ENST00000590266 hCG_1984214I3L0E3 225 aa16.11■□□□□ 0.17
SCAMP4-212ENST00000590266 RGS20O76081 388 aa16.11■□□□□ 0.17
SCAMP4-212ENST00000590266 NEK4P51957 841 aa16.11■□□□□ 0.17
SCAMP4-212ENST00000590266 AK2P54819 239 aa16.11■□□□□ 0.17
SCAMP4-212ENST00000590266 EVCP57679 992 aa16.11■□□□□ 0.17
SCAMP4-212ENST00000590266 TLE2Q04725 743 aa16.11■□□□□ 0.17
SCAMP4-212ENST00000590266 CCDC62Q6P9F0 684 aa16.11■□□□□ 0.17
SCAMP4-212ENST00000590266 ZNF713Q8N859 430 aaPredicted RBP16.11■□□□□ 0.17
SCAMP4-212ENST00000590266 ZNF274Q96GC6 653 aaPredicted RBP16.11■□□□□ 0.17
SCAMP4-212ENST00000590266 SLKQ9H2G2 1235 aaPredicted RBP16.11■□□□□ 0.17
SCAMP4-212ENST00000590266 RIC8AQ9NPQ8 531 aa16.11■□□□□ 0.17
SCAMP4-212ENST00000590266 PCDHA6Q9UN73 950 aa16.11■□□□□ 0.17
SCAMP4-212ENST00000590266 PCDHA8Q9Y5H6 950 aa16.11■□□□□ 0.17
SCAMP4-212ENST00000590266 A0A1W2PPC1 479 aa16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 PRPF3O43395 683 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 DTNBO60941 627 aa16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 IFNAR1P17181 557 aa16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 MRPS9P82933 396 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 MDM2Q00987 491 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 SSRP1Q08945 709 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 SNX17Q15036 470 aa16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 ANKRD1Q15327 319 aa16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 NTRK3Q16288 839 aa16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 GNPTABQ3T906 1256 aa16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 CPLX2Q6PUV4 134 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 DHX37Q8IY37 1157 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 TRIM22Q8IYM9 498 aa16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 PPP1R13LQ8WUF5 828 aa16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 AFG1LQ8WV93 481 aa16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 RNF26Q9BY78 433 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 EHMT1Q9H9B1 1298 aa16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 POLR3EQ9NVU0 708 aa16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 TMEM260Q9NX78 707 aa16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 DDX41Q9UJV9 622 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 TPCN1Q9ULQ1 816 aa16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 ELP1O95163 1332 aa16.1■□□□□ 0.17
SCAMP4-212ENST00000590266 DCDC2CA8MYV0 355 aa16.09■□□□□ 0.17
SCAMP4-212ENST00000590266 CABYRO75952 493 aa16.09■□□□□ 0.17
SCAMP4-212ENST00000590266 GGPS1O95749 300 aa16.09■□□□□ 0.17
SCAMP4-212ENST00000590266 NKX3-2P78367 333 aa16.09■□□□□ 0.17
SCAMP4-212ENST00000590266 ARHGAP1Q07960 439 aa16.09■□□□□ 0.17
SCAMP4-212ENST00000590266 PKN1Q16512 942 aa16.09■□□□□ 0.17
SCAMP4-212ENST00000590266 PCNX4Q63HM2 1172 aa16.09■□□□□ 0.17
SCAMP4-212ENST00000590266 VPS54Q9P1Q0 977 aa16.09■□□□□ 0.17
SCAMP4-212ENST00000590266 TRIOBPQ9H2D6 2365 aa16.09■□□□□ 0.17
SCAMP4-212ENST00000590266 FRMPD4Q14CM0 1322 aa16.09■□□□□ 0.17
SCAMP4-212ENST00000590266 MCM3APO60318 1980 aa16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 ARVCFO00192 962 aa16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 MMP3P08254 477 aa16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 CLTBP09497 229 aa16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 UBA1P22314 1058 aaKnown RBP16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 MAGEA10P43363 369 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 PURAQ00577 322 aaKnown RBP16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 SCRN1Q12765 414 aa16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 ITGA7Q13683 1181 aa16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 FAM47CQ5HY64 1035 aa16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 C1orf53Q5VUE5 145 aa16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 JAKMIP3Q5VZ66 844 aa16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 SH3RF1Q7Z6J0 888 aa16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 CCDC12Q8WUD4 166 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 LBHD1Q9BQE6 289 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 PRO3102Q9H379 93 aa16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 MLXIPQ9HAP2 919 aa16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 C6orf50Q9HD87 102 aa16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 PDLIM7Q9NR12 457 aa16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 TMEM39AQ9NV64 488 aa16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 PKD2L1Q9P0L9 805 aa16.08■□□□□ 0.16
SCAMP4-212ENST00000590266 A6NJR5 290 aa16.07■□□□□ 0.16
SCAMP4-212ENST00000590266 FIBPO43427 364 aa16.07■□□□□ 0.16
SCAMP4-212ENST00000590266 STAM2O75886 525 aa16.07■□□□□ 0.16
SCAMP4-212ENST00000590266 SP2Q02086 613 aa16.07■□□□□ 0.16
SCAMP4-212ENST00000590266 SP4Q02446 784 aa16.07■□□□□ 0.16
SCAMP4-212ENST00000590266 KCNV1Q6PIU1 500 aa16.07■□□□□ 0.16
SCAMP4-212ENST00000590266 NLRX1Q86UT6 975 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms