RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 C16orf59Q7L2K0 433 aa15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 MICU3Q86XE3 530 aa15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 DEFB123Q8N688 67 aa15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 FANCBQ8NB91 859 aa15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 GPKOWQ92917 476 aaPredicted RBP eCLIP15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 RRP36Q96EU6 259 aaKnown RBP15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 FAM161BQ96MY7 647 aa15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 MTG1Q9BT17 334 aaPredicted RBP15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 SPZ1Q9BXG8 430 aa15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 TRMT13Q9NUP7 481 aaKnown RBP15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 MAP3K20Q9NYL2 800 aaKnown RBP15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 BRPF3Q9ULD4 1205 aa15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 MRVI1Q9Y6F6 885 aa15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 GH1P01241 217 aa15.88■□□□□ 0.13
NEDD4L-228ENST00000590248 NEFLP07196 543 aa15.88■□□□□ 0.13
NEDD4L-228ENST00000590248 CYP2C9P11712 490 aa15.88■□□□□ 0.13
NEDD4L-228ENST00000590248 CCL23P55773 120 aa15.88■□□□□ 0.13
NEDD4L-228ENST00000590248 BRDTQ58F21 947 aaPredicted RBP15.88■□□□□ 0.13
NEDD4L-228ENST00000590248 USP17L6PQ6QN14 398 aa15.88■□□□□ 0.13
NEDD4L-228ENST00000590248 DHX32Q7L7V1 743 aaKnown RBP15.88■□□□□ 0.13
NEDD4L-228ENST00000590248 VSIG10LQ86VR7 867 aa15.88■□□□□ 0.13
NEDD4L-228ENST00000590248 RNPC3Q96LT9 517 aaKnown RBP15.88■□□□□ 0.13
NEDD4L-228ENST00000590248 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.88■□□□□ 0.131e-7■■■■□ 23
NEDD4L-228ENST00000590248 ALDH8A1Q9H2A2 487 aaPredicted RBP15.88■□□□□ 0.13
NEDD4L-228ENST00000590248 RBAK-RBAKDNI3L0D1 243 aa15.87■□□□□ 0.13
NEDD4L-228ENST00000590248 MMP3P08254 477 aa15.87■□□□□ 0.13
NEDD4L-228ENST00000590248 CALM1P0DP23 149 aa15.87■□□□□ 0.13
NEDD4L-228ENST00000590248 CALM2P0DP24 149 aa15.87■□□□□ 0.13
NEDD4L-228ENST00000590248 CALM3P0DP25 149 aa15.87■□□□□ 0.13
NEDD4L-228ENST00000590248 SMARCA1P28370 1054 aa15.87■□□□□ 0.13
NEDD4L-228ENST00000590248 GNAQP50148 359 aa15.87■□□□□ 0.13
NEDD4L-228ENST00000590248 SP2Q02086 613 aa15.87■□□□□ 0.13
NEDD4L-228ENST00000590248 TRAF1Q13077 416 aa15.87■□□□□ 0.13
NEDD4L-228ENST00000590248 TSGA10IPQ3SY00 556 aa15.87■□□□□ 0.13
NEDD4L-228ENST00000590248 SGMS1Q86VZ5 419 aa15.87■□□□□ 0.13
NEDD4L-228ENST00000590248 SAMD3Q8N6K7 520 aa15.87■□□□□ 0.13
NEDD4L-228ENST00000590248 LZTS2Q9BRK4 669 aa15.87■□□□□ 0.13
NEDD4L-228ENST00000590248 HIPK3Q9H422 1215 aa15.87■□□□□ 0.13
NEDD4L-228ENST00000590248 BCAS3Q9H6U6 928 aa15.87■□□□□ 0.13
NEDD4L-228ENST00000590248 RTEL1Q9NZ71 1219 aa15.87■□□□□ 0.13
NEDD4L-228ENST00000590248 SEC63Q9UGP8 760 aaKnown RBP15.87■□□□□ 0.13
NEDD4L-228ENST00000590248 GBF1Q92538 1859 aa15.86■□□□□ 0.13
NEDD4L-228ENST00000590248 CCND2P30279 289 aa15.86■□□□□ 0.13
NEDD4L-228ENST00000590248 MRPS9P82933 396 aaKnown RBP15.86■□□□□ 0.13
NEDD4L-228ENST00000590248 TMEM240Q5SV17 173 aa15.86■□□□□ 0.13
NEDD4L-228ENST00000590248 GPR153Q6NV75 609 aa15.86■□□□□ 0.13
NEDD4L-228ENST00000590248 APOA5Q6Q788 366 aa15.86■□□□□ 0.13
NEDD4L-228ENST00000590248 SYNE3Q6ZMZ3 975 aa15.86■□□□□ 0.13
NEDD4L-228ENST00000590248 TMTC3Q6ZXV5 915 aa15.86■□□□□ 0.13
NEDD4L-228ENST00000590248 DHX37Q8IY37 1157 aaKnown RBP15.86■□□□□ 0.13
NEDD4L-228ENST00000590248 TMEM199Q8N511 208 aa15.86■□□□□ 0.13
NEDD4L-228ENST00000590248 SCLYQ96I15 445 aa15.86■□□□□ 0.13
NEDD4L-228ENST00000590248 NOC4LQ9BVI4 516 aaKnown RBP15.86■□□□□ 0.13
NEDD4L-228ENST00000590248 MTMR10Q9NXD2 777 aa15.86■□□□□ 0.13
NEDD4L-228ENST00000590248 MYO9BQ13459 2157 aa15.86■□□□□ 0.13
NEDD4L-228ENST00000590248 TET1Q8NFU7 2136 aa15.85■□□□□ 0.13
NEDD4L-228ENST00000590248 MEIS2O14770 477 aa15.85■□□□□ 0.13
NEDD4L-228ENST00000590248 KPNA6O60684 536 aa15.85■□□□□ 0.13
NEDD4L-228ENST00000590248 CASTP20810 708 aaKnown RBP15.85■□□□□ 0.13
NEDD4L-228ENST00000590248 ZNF365Q70YC5 407 aa15.85■□□□□ 0.13
NEDD4L-228ENST00000590248 SMARCC2Q8TAQ2 1214 aa15.85■□□□□ 0.13
NEDD4L-228ENST00000590248 KAT2BQ92831 832 aa15.85■□□□□ 0.13
NEDD4L-228ENST00000590248 WNT8AQ9H1J5 351 aa15.85■□□□□ 0.13
NEDD4L-228ENST00000590248 NAP1L2Q9ULW6 460 aaPredicted RBP15.85■□□□□ 0.13
NEDD4L-228ENST00000590248 SNX14Q9Y5W7 946 aa15.85■□□□□ 0.13
NEDD4L-228ENST00000590248 COL6A3P12111 3177 aa15.84■□□□□ 0.13
NEDD4L-228ENST00000590248 ZBTB43O43298 467 aa15.84■□□□□ 0.13
NEDD4L-228ENST00000590248 GGPS1O95749 300 aa15.84■□□□□ 0.13
NEDD4L-228ENST00000590248 ZNF286BP0CG31 522 aa15.84■□□□□ 0.13
NEDD4L-228ENST00000590248 HSPA4P34932 840 aa15.84■□□□□ 0.13
NEDD4L-228ENST00000590248 PPIGQ13427 754 aaKnown RBP eCLIP15.84■□□□□ 0.132e-8■■□□□ 13.2
NEDD4L-228ENST00000590248 LAMC2Q13753 1193 aa15.84■□□□□ 0.13
NEDD4L-228ENST00000590248 KRT32Q14532 448 aa15.84■□□□□ 0.13
NEDD4L-228ENST00000590248 HSDL1Q3SXM5 330 aa15.84■□□□□ 0.13
NEDD4L-228ENST00000590248 MYSM1Q5VVJ2 828 aa15.84■□□□□ 0.13
NEDD4L-228ENST00000590248 FAM109BQ6ICB4 259 aaPredicted RBP15.84■□□□□ 0.13
NEDD4L-228ENST00000590248 NFRKBQ6P4R8 1299 aa15.84■□□□□ 0.13
NEDD4L-228ENST00000590248 JAKMIP1Q96N16 626 aaKnown RBP15.84■□□□□ 0.13
NEDD4L-228ENST00000590248 SEZ6LQ9BYH1 1024 aa15.84■□□□□ 0.13
NEDD4L-228ENST00000590248 KAT6AQ92794 2004 aa15.84■□□□□ 0.13
NEDD4L-228ENST00000590248 KLF18A0A0U1RQI7 1052 aa15.83■□□□□ 0.12
NEDD4L-228ENST00000590248 GRXCR1A8MXD5 290 aa15.83■□□□□ 0.12
NEDD4L-228ENST00000590248 UBA1P22314 1058 aaKnown RBP15.83■□□□□ 0.12
NEDD4L-228ENST00000590248 CDC27P30260 824 aa15.83■□□□□ 0.12
NEDD4L-228ENST00000590248 DGKDQ16760 1214 aa15.83■□□□□ 0.12
NEDD4L-228ENST00000590248 UBE2SQ16763 222 aa15.83■□□□□ 0.12
NEDD4L-228ENST00000590248 RTN1Q16799 776 aa15.83■□□□□ 0.12
NEDD4L-228ENST00000590248 CELF3Q5SZQ8 465 aaKnown RBP15.83■□□□□ 0.12
NEDD4L-228ENST00000590248 Q6ZUG5 572 aa15.83■□□□□ 0.12
NEDD4L-228ENST00000590248 HEATR3Q7Z4Q2 680 aa15.83■□□□□ 0.12
NEDD4L-228ENST00000590248 KCNB2Q92953 911 aa15.83■□□□□ 0.12
NEDD4L-228ENST00000590248 CUL5Q93034 780 aa15.83■□□□□ 0.12
NEDD4L-228ENST00000590248 ALG1Q9BT22 464 aa15.83■□□□□ 0.12
NEDD4L-228ENST00000590248 PSTPIP2Q9H939 334 aa15.83■□□□□ 0.12
NEDD4L-228ENST00000590248 IL23AQ9NPF7 189 aa15.83■□□□□ 0.12
NEDD4L-228ENST00000590248 FAM217BQ9NTX9 383 aaPredicted RBP15.83■□□□□ 0.12
NEDD4L-228ENST00000590248 TELO2Q9Y4R8 837 aa15.83■□□□□ 0.12
NEDD4L-228ENST00000590248 PIK3CDO00329 1044 aa15.82■□□□□ 0.12
NEDD4L-228ENST00000590248 SUPT20HL2P0C7V6 817 aa15.82■□□□□ 0.12
NEDD4L-228ENST00000590248 FGD1P98174 961 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms