RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 KIAA0895Q8NCT3 520 aa17.41■□□□□ 0.38
MBD1-222ENST00000590208 LTBP4Q8N2S1 1624 aa17.41■□□□□ 0.38
MBD1-222ENST00000590208 MAGEB6P1A0A0J9YX57 407 aa17.41■□□□□ 0.38
MBD1-222ENST00000590208 GMNCA6NCL1 334 aa17.41■□□□□ 0.38
MBD1-222ENST00000590208 CLGNO14967 610 aa17.41■□□□□ 0.38
MBD1-222ENST00000590208 PJA2O43164 708 aa17.41■□□□□ 0.38
MBD1-222ENST00000590208 EHHADHQ08426 723 aa17.41■□□□□ 0.38
MBD1-222ENST00000590208 PLCB4Q15147 1175 aa17.41■□□□□ 0.38
MBD1-222ENST00000590208 ASTE1Q2TB18 679 aaPredicted RBP17.41■□□□□ 0.38
MBD1-222ENST00000590208 BAP1Q92560 729 aa17.41■□□□□ 0.38
MBD1-222ENST00000590208 NLRC4Q9NPP4 1024 aa17.41■□□□□ 0.38
MBD1-222ENST00000590208 ANAPC4Q9UJX5 808 aa17.41■□□□□ 0.38
MBD1-222ENST00000590208 SF3A3Q12874 501 aaKnown RBP eCLIP17.4■□□□□ 0.383e-8■■■■■ 54.4
MBD1-222ENST00000590208 PPP4R3AQ6IN85 833 aa17.4■□□□□ 0.38
MBD1-222ENST00000590208 LEMD3Q9Y2U8 911 aa17.4■□□□□ 0.38
MBD1-222ENST00000590208 MROH5Q6ZUA9 1318 aa17.4■□□□□ 0.38
MBD1-222ENST00000590208 PDE8AO60658 829 aa17.4■□□□□ 0.38
MBD1-222ENST00000590208 CALM1P0DP23 149 aa17.4■□□□□ 0.38
MBD1-222ENST00000590208 CALM2P0DP24 149 aa17.4■□□□□ 0.38
MBD1-222ENST00000590208 CALM3P0DP25 149 aa17.4■□□□□ 0.38
MBD1-222ENST00000590208 HSD17B3P37058 310 aa17.4■□□□□ 0.38
MBD1-222ENST00000590208 PTPROQ16827 1216 aa17.4■□□□□ 0.38
MBD1-222ENST00000590208 CNOT8Q9UFF9 292 aaKnown RBP17.4■□□□□ 0.38
MBD1-222ENST00000590208 ASAP1Q9ULH1 1129 aa17.4■□□□□ 0.38
MBD1-222ENST00000590208 BAZ2AQ9UIF9 1905 aaKnown RBP17.39■□□□□ 0.38
MBD1-222ENST00000590208 PCDH11XQ9BZA7 1347 aa17.39■□□□□ 0.38
MBD1-222ENST00000590208 PCDH11YQ9BZA8 1340 aa17.39■□□□□ 0.38
MBD1-222ENST00000590208 DDAH1O94760 285 aa17.39■□□□□ 0.37
MBD1-222ENST00000590208 UAP1Q16222 522 aaPredicted RBP17.39■□□□□ 0.37
MBD1-222ENST00000590208 CDC37Q16543 378 aaPredicted RBP17.39■□□□□ 0.37
MBD1-222ENST00000590208 ANKRD20A8PQ5CZ79 823 aa17.39■□□□□ 0.37
MBD1-222ENST00000590208 HGSNATQ68CP4 663 aa17.39■□□□□ 0.37
MBD1-222ENST00000590208 SLC12A6Q9UHW9 1150 aa17.39■□□□□ 0.37
MBD1-222ENST00000590208 BCORQ6W2J9 1755 aa17.39■□□□□ 0.37
MBD1-222ENST00000590208 CCDC194A0A1B0GVG4 234 aa17.39■□□□□ 0.37
MBD1-222ENST00000590208 CCDC189A1A4V9 331 aa17.39■□□□□ 0.37
MBD1-222ENST00000590208 GOLGA6L10A6NI86 522 aa17.39■□□□□ 0.37
MBD1-222ENST00000590208 DCDC2CA8MYV0 355 aa17.39■□□□□ 0.37
MBD1-222ENST00000590208 PAX7P23759 505 aa17.39■□□□□ 0.37
MBD1-222ENST00000590208 KLRC1P26715 233 aa17.39■□□□□ 0.37
MBD1-222ENST00000590208 ERVK-9P63128 1117 aa17.39■□□□□ 0.37
MBD1-222ENST00000590208 ENOX2Q16206 610 aaKnown RBP17.39■□□□□ 0.37
MBD1-222ENST00000590208 TXNRD1Q16881 649 aa17.39■□□□□ 0.37
MBD1-222ENST00000590208 CHADLQ6NUI6 762 aa17.39■□□□□ 0.37
MBD1-222ENST00000590208 WHAMMQ8TF30 809 aa17.39■□□□□ 0.37
MBD1-222ENST00000590208 CCSER1Q9C0I3 900 aa17.39■□□□□ 0.37
MBD1-222ENST00000590208 GGA2Q9UJY4 613 aa17.39■□□□□ 0.37
MBD1-222ENST00000590208 GCOM1H8Y6P7 765 aaPredicted RBP17.38■□□□□ 0.37
MBD1-222ENST00000590208 MYZAPP0CAP1 466 aa17.38■□□□□ 0.37
MBD1-222ENST00000590208 HSPA9P38646 679 aaKnown RBP17.38■□□□□ 0.37
MBD1-222ENST00000590208 BYSLQ13895 437 aaKnown RBP17.38■□□□□ 0.37
MBD1-222ENST00000590208 SLC4A8Q2Y0W8 1093 aa17.38■□□□□ 0.37
MBD1-222ENST00000590208 CACNA2D4Q7Z3S7 1137 aa17.38■□□□□ 0.37
MBD1-222ENST00000590208 SEC16BQ96JE7 1060 aa17.38■□□□□ 0.37
MBD1-222ENST00000590208 UBR2Q8IWV8 1755 aa17.38■□□□□ 0.37
MBD1-222ENST00000590208 DOCK2Q92608 1830 aa17.38■□□□□ 0.37
MBD1-222ENST00000590208 USP17L12C9JPN9 530 aa17.38■□□□□ 0.37
MBD1-222ENST00000590208 USP17L21D6R901 530 aa17.38■□□□□ 0.37
MBD1-222ENST00000590208 TRAPPC3O43617 180 aa17.38■□□□□ 0.37
MBD1-222ENST00000590208 ODF2Q5BJF6 829 aa17.38■□□□□ 0.37
MBD1-222ENST00000590208 CABP7Q86V35 215 aa17.38■□□□□ 0.37
MBD1-222ENST00000590208 SGSM3Q96HU1 749 aa17.38■□□□□ 0.37
MBD1-222ENST00000590208 INPP4AQ96PE3 977 aaPredicted RBP17.38■□□□□ 0.37
MBD1-222ENST00000590208 TACO1Q9BSH4 297 aaKnown RBP17.38■□□□□ 0.37
MBD1-222ENST00000590208 GOLPH3Q9H4A6 298 aa17.38■□□□□ 0.37
MBD1-222ENST00000590208 WTIPA6NIX2 430 aaPredicted RBP17.37■□□□□ 0.37
MBD1-222ENST00000590208 PHF20L1A8MW92 1017 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 H0YGN5 161 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 ECHS1P30084 290 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 SCTRP47872 440 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 RIOK1Q9BRS2 568 aaKnown RBP17.37■□□□□ 0.37
MBD1-222ENST00000590208 NEUROG2Q9H2A3 272 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 LRRC4CQ9HCJ2 640 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 NFS1Q9Y697 457 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 FLT1P17948 1338 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 ALS2Q96Q42 1657 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 COL18A1P39060 1754 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 MYL1P05976 194 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 RPSAP08865 295 aaKnown RBP17.37■□□□□ 0.37
MBD1-222ENST00000590208 FLT3P36888 993 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 ZNF844Q08AG5 666 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 DRP2Q13474 957 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 PDXDC1Q6P996 788 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 PACSIN1Q9BY11 444 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 ACTR5Q9H9F9 607 aaPredicted RBP17.37■□□□□ 0.37
MBD1-222ENST00000590208 PLCB1Q9NQ66 1216 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 PCDHA4Q9UN74 947 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 MTMR7Q9Y216 660 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 TLR2O60603 784 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 CTNNA1P35221 906 aaKnown RBP17.37■□□□□ 0.37
MBD1-222ENST00000590208 ARID5AQ03989 594 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 DHX37Q8IY37 1157 aaKnown RBP17.37■□□□□ 0.37
MBD1-222ENST00000590208 STAG2Q8N3U4 1231 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 RNF10Q8N5U6 811 aaKnown RBP17.37■□□□□ 0.37
MBD1-222ENST00000590208 RAPGEF5Q92565 580 aa17.37■□□□□ 0.37
MBD1-222ENST00000590208 TAF1DQ9H5J8 278 aaPredicted RBP17.37■□□□□ 0.37
MBD1-222ENST00000590208 PPP1R12BO60237 982 aaPredicted RBP17.36■□□□□ 0.37
MBD1-222ENST00000590208 TANGO6Q9C0B7 1094 aa17.36■□□□□ 0.37
MBD1-222ENST00000590208 RNF14Q9UBS8 474 aa17.36■□□□□ 0.37
MBD1-222ENST00000590208 TSKSQ9UJT2 592 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms