RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 USP17L6PQ6QN14 398 aa20.8■□□□□ 0.92
CIRBP-227ENST00000590188 BLOC1S2Q6QNY1 142 aa20.8■□□□□ 0.92
CIRBP-227ENST00000590188 SMARCC2Q8TAQ2 1214 aa20.8■□□□□ 0.92
CIRBP-227ENST00000590188 GPKOWQ92917 476 aaPredicted RBP eCLIP20.8■□□□□ 0.925e-13■□□□□ 10.6
CIRBP-227ENST00000590188 MRVI1Q9Y6F6 885 aa20.8■□□□□ 0.92
CIRBP-227ENST00000590188 RANBP2P49792 3224 aaKnown RBP20.8■□□□□ 0.92
CIRBP-227ENST00000590188 CNTNAP5Q8WYK1 1306 aa20.79■□□□□ 0.92
CIRBP-227ENST00000590188 KIAA0355O15063 1070 aa20.79■□□□□ 0.92
CIRBP-227ENST00000590188 TLR3O15455 904 aaKnown RBP20.79■□□□□ 0.92
CIRBP-227ENST00000590188 GH1P01241 217 aa20.79■□□□□ 0.92
CIRBP-227ENST00000590188 CASTP20810 708 aaKnown RBP20.79■□□□□ 0.92
CIRBP-227ENST00000590188 CCND2P30279 289 aa20.79■□□□□ 0.92
CIRBP-227ENST00000590188 PURAQ00577 322 aaKnown RBP20.79■□□□□ 0.92
CIRBP-227ENST00000590188 BRDTQ58F21 947 aaPredicted RBP20.79■□□□□ 0.92
CIRBP-227ENST00000590188 HEATR3Q7Z4Q2 680 aa20.79■□□□□ 0.92
CIRBP-227ENST00000590188 FAM126BQ8IXS8 530 aa20.79■□□□□ 0.92
CIRBP-227ENST00000590188 SAMD3Q8N6K7 520 aa20.79■□□□□ 0.92
CIRBP-227ENST00000590188 AFG1LQ8WV93 481 aa20.79■□□□□ 0.92
CIRBP-227ENST00000590188 BRF1Q92994 677 aa20.79■□□□□ 0.92
CIRBP-227ENST00000590188 CUL5Q93034 780 aa20.79■□□□□ 0.92
CIRBP-227ENST00000590188 PPP1R12CQ9BZL4 782 aa20.79■□□□□ 0.92
CIRBP-227ENST00000590188 POLR3EQ9NVU0 708 aa20.79■□□□□ 0.92
CIRBP-227ENST00000590188 RBM28Q9NW13 759 aaKnown RBP20.79■□□□□ 0.92
CIRBP-227ENST00000590188 RGS20O76081 388 aa20.78■□□□□ 0.92
CIRBP-227ENST00000590188 CDC27P30260 824 aa20.78■□□□□ 0.92
CIRBP-227ENST00000590188 ARHGAP1Q07960 439 aa20.78■□□□□ 0.92
CIRBP-227ENST00000590188 DDX41Q9UJV9 622 aaKnown RBP20.78■□□□□ 0.92
CIRBP-227ENST00000590188 RPS6KB1P23443 525 aa20.77■□□□□ 0.92
CIRBP-227ENST00000590188 UBE2SQ16763 222 aa20.77■□□□□ 0.92
CIRBP-227ENST00000590188 FAM47CQ5HY64 1035 aa20.77■□□□□ 0.92
CIRBP-227ENST00000590188 C9orf50Q5SZB4 431 aa20.77■□□□□ 0.92
CIRBP-227ENST00000590188 VSIG10LQ86VR7 867 aa20.77■□□□□ 0.92
CIRBP-227ENST00000590188 SLC43A3Q8NBI5 491 aa20.77■□□□□ 0.92
CIRBP-227ENST00000590188 MTG1Q9BT17 334 aaPredicted RBP20.77■□□□□ 0.92
CIRBP-227ENST00000590188 TRPV6Q9H1D0 765 aa20.77■□□□□ 0.92
CIRBP-227ENST00000590188 TBX21Q9UL17 535 aa20.77■□□□□ 0.92
CIRBP-227ENST00000590188 KIAA1217Q5T5P2 1943 aa20.76■□□□□ 0.91
CIRBP-227ENST00000590188 A6NJR5 290 aa20.76■□□□□ 0.91
CIRBP-227ENST00000590188 MEIS2O14770 477 aa20.76■□□□□ 0.91
CIRBP-227ENST00000590188 MMP3P08254 477 aa20.76■□□□□ 0.91
CIRBP-227ENST00000590188 METAP2P50579 478 aaKnown RBP eCLIP20.76■□□□□ 0.91
CIRBP-227ENST00000590188 SHHQ15465 462 aa20.76■□□□□ 0.91
CIRBP-227ENST00000590188 USP26Q9BXU7 913 aa20.76■□□□□ 0.91
CIRBP-227ENST00000590188 PSTPIP2Q9H939 334 aa20.76■□□□□ 0.91
CIRBP-227ENST00000590188 FAM217BQ9NTX9 383 aaPredicted RBP20.76■□□□□ 0.91
CIRBP-227ENST00000590188 RTEL1Q9NZ71 1219 aa20.76■□□□□ 0.91
CIRBP-227ENST00000590188 B4GALT4O60513 344 aa20.75■□□□□ 0.91
CIRBP-227ENST00000590188 CD4P01730 458 aa20.75■□□□□ 0.91
CIRBP-227ENST00000590188 PSMA5P28066 241 aa20.75■□□□□ 0.91
CIRBP-227ENST00000590188 ADD1P35611 737 aaKnown RBP20.75■□□□□ 0.91
CIRBP-227ENST00000590188 EPHB4P54760 987 aa20.75■□□□□ 0.91
CIRBP-227ENST00000590188 NBPF20Q3BBV1 942 aa20.75■□□□□ 0.91
CIRBP-227ENST00000590188 WWC2Q6AWC2 1192 aa20.75■□□□□ 0.91
CIRBP-227ENST00000590188 DHX37Q8IY37 1157 aaKnown RBP20.75■□□□□ 0.91
CIRBP-227ENST00000590188 V9GY48 417 aaPredicted RBP20.75■□□□□ 0.91
CIRBP-227ENST00000590188 TIMP1P01033 207 aa20.74■□□□□ 0.91
CIRBP-227ENST00000590188 CYP2C18P33260 490 aa20.74■□□□□ 0.91
CIRBP-227ENST00000590188 MRPS9P82933 396 aaKnown RBP20.74■□□□□ 0.91
CIRBP-227ENST00000590188 FPGSQ05932 587 aa20.74■□□□□ 0.91
CIRBP-227ENST00000590188 FUT2Q10981 343 aa20.74■□□□□ 0.91
CIRBP-227ENST00000590188 ALDH8A1Q9H2A2 487 aaPredicted RBP20.74■□□□□ 0.91
CIRBP-227ENST00000590188 TRMT13Q9NUP7 481 aaKnown RBP20.74■□□□□ 0.91
CIRBP-227ENST00000590188 UMODL1Q5DID0 1318 aa20.74■□□□□ 0.91
CIRBP-227ENST00000590188 PPFIA3O75145 1194 aa20.73■□□□□ 0.91
CIRBP-227ENST00000590188 GGPS1O95749 300 aa20.73■□□□□ 0.91
CIRBP-227ENST00000590188 UBA1P22314 1058 aaKnown RBP20.73■□□□□ 0.91
CIRBP-227ENST00000590188 NAPAP54920 295 aa20.73■□□□□ 0.91
CIRBP-227ENST00000590188 SP2Q02086 613 aa20.73■□□□□ 0.91
CIRBP-227ENST00000590188 TYW1BQ6NUM6 668 aa20.73■□□□□ 0.91
CIRBP-227ENST00000590188 FRMPD4Q14CM0 1322 aa20.73■□□□□ 0.91
CIRBP-227ENST00000590188 PIK3CDO00329 1044 aa20.72■□□□□ 0.91
CIRBP-227ENST00000590188 KPNA6O60684 536 aa20.72■□□□□ 0.91
CIRBP-227ENST00000590188 ZNF286BP0CG31 522 aa20.72■□□□□ 0.91
CIRBP-227ENST00000590188 CYP2C9P11712 490 aa20.72■□□□□ 0.91
CIRBP-227ENST00000590188 LRIT3Q3SXY7 679 aa20.72■□□□□ 0.91
CIRBP-227ENST00000590188 PGBD1Q96JS3 809 aa20.72■□□□□ 0.91
CIRBP-227ENST00000590188 LARP6Q9BRS8 491 aaKnown RBP20.72■□□□□ 0.91
CIRBP-227ENST00000590188 UPF3BQ9BZI7 483 aaKnown RBP20.72■□□□□ 0.91
CIRBP-227ENST00000590188 HIPK3Q9H422 1215 aa20.72■□□□□ 0.91
CIRBP-227ENST00000590188 BCAS3Q9H6U6 928 aa20.72■□□□□ 0.91
CIRBP-227ENST00000590188 CSF2RAP15509 400 aa20.71■□□□□ 0.91
CIRBP-227ENST00000590188 CCL23P55773 120 aa20.71■□□□□ 0.91
CIRBP-227ENST00000590188 CCT2P78371 535 aaKnown RBP20.71■□□□□ 0.91
CIRBP-227ENST00000590188 LAMC2Q13753 1193 aa20.71■□□□□ 0.91
CIRBP-227ENST00000590188 GNPTABQ3T906 1256 aa20.71■□□□□ 0.91
CIRBP-227ENST00000590188 CELF3Q5SZQ8 465 aaKnown RBP20.71■□□□□ 0.91
CIRBP-227ENST00000590188 MFSD5Q6N075 450 aa20.71■□□□□ 0.91
CIRBP-227ENST00000590188 RUFY3Q7L099 469 aa20.71■□□□□ 0.91
CIRBP-227ENST00000590188 SPATA33Q96N06 139 aa20.71■□□□□ 0.91
CIRBP-227ENST00000590188 MLXIPQ9HAP2 919 aa20.71■□□□□ 0.91
CIRBP-227ENST00000590188 LAMA3Q16787 3333 aa20.7■□□□□ 0.9
CIRBP-227ENST00000590188 SPDYE3A6NKU9 549 aa20.7■□□□□ 0.9
CIRBP-227ENST00000590188 ACRP10323 421 aa20.7■□□□□ 0.9
CIRBP-227ENST00000590188 RCAN1P53805 252 aa20.7■□□□□ 0.9
CIRBP-227ENST00000590188 SEMA3FQ13275 785 aa20.7■□□□□ 0.9
CIRBP-227ENST00000590188 DGKDQ16760 1214 aa20.7■□□□□ 0.9
CIRBP-227ENST00000590188 HSDL1Q3SXM5 330 aa20.7■□□□□ 0.9
CIRBP-227ENST00000590188 MYSM1Q5VVJ2 828 aa20.7■□□□□ 0.9
CIRBP-227ENST00000590188 KCNV1Q6PIU1 500 aa20.7■□□□□ 0.9
CIRBP-227ENST00000590188 PPTC7Q8NI37 304 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms