RNA–Protein interactions for RNA: ENST00000590055.1

AP001269.2-201, humanhuman

TSL 3 BASIC

Gene AP001269.2, Length 379 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001269.2-201ENST00000590055 TSEN34Q9BSV6 310 aaKnown RBP15.88■□□□□ 0.13
AP001269.2-201ENST00000590055 ALDH8A1Q9H2A2 487 aaPredicted RBP15.88■□□□□ 0.13
AP001269.2-201ENST00000590055 BARHL2Q9NY43 387 aa15.88■□□□□ 0.13
AP001269.2-201ENST00000590055 DOCK5Q9H7D0 1870 aa15.88■□□□□ 0.13
AP001269.2-201ENST00000590055 SMCO2A6NFE2 343 aa15.87■□□□□ 0.13
AP001269.2-201ENST00000590055 CPLX1O14810 134 aa15.87■□□□□ 0.13
AP001269.2-201ENST00000590055 RGS20O76081 388 aa15.87■□□□□ 0.13
AP001269.2-201ENST00000590055 RTP1P59025 263 aa15.87■□□□□ 0.13
AP001269.2-201ENST00000590055 SCRN1Q12765 414 aa15.87■□□□□ 0.13
AP001269.2-201ENST00000590055 PRPF38BQ5VTL8 546 aaKnown RBP15.87■□□□□ 0.13
AP001269.2-201ENST00000590055 CCDC62Q6P9F0 684 aa15.87■□□□□ 0.13
AP001269.2-201ENST00000590055 OR6J1Q8NGC5 347 aa15.87■□□□□ 0.13
AP001269.2-201ENST00000590055 VTI1AQ96AJ9 217 aa15.87■□□□□ 0.13
AP001269.2-201ENST00000590055 PGBD1Q96JS3 809 aa15.87■□□□□ 0.13
AP001269.2-201ENST00000590055 RNF26Q9BY78 433 aaPredicted RBP15.87■□□□□ 0.13
AP001269.2-201ENST00000590055 C22orf23Q9BZE7 217 aa15.87■□□□□ 0.13
AP001269.2-201ENST00000590055 SLKQ9H2G2 1235 aaPredicted RBP15.87■□□□□ 0.13
AP001269.2-201ENST00000590055 RTEL1Q9NZ71 1219 aa15.87■□□□□ 0.13
AP001269.2-201ENST00000590055 ATP11BQ9Y2G3 1177 aa15.87■□□□□ 0.13
AP001269.2-201ENST00000590055 Q9Y3F1 56 aa15.87■□□□□ 0.13
AP001269.2-201ENST00000590055 NR2E3Q9Y5X4 410 aa15.87■□□□□ 0.13
AP001269.2-201ENST00000590055 MRVI1Q9Y6F6 885 aa15.87■□□□□ 0.13
AP001269.2-201ENST00000590055 MOXD2PA6NHM9 499 aa15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 hCG_1984214I3L0E3 225 aa15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 SORBS3O60504 671 aa15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 LARGE1O95461 756 aa15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 SYN1P17600 705 aa15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 ADCY7P51828 1080 aa15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 NKX3-2P78367 333 aa15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 MRPS9P82933 396 aaKnown RBP15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 SSRP1Q08945 709 aaKnown RBP15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 ANKRD1Q15327 319 aa15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 TRIM60Q495X7 471 aa15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 PPP1R18Q6NYC8 613 aa15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 CXCL17Q6UXB2 119 aa15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 ZNF713Q8N859 430 aaPredicted RBP15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 RIC8AQ9NPQ8 531 aa15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 STARD7Q9NQZ5 370 aa15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 TMEM260Q9NX78 707 aa15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 DDX41Q9UJV9 622 aaKnown RBP15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 ZMYND8Q9ULU4 1186 aaPredicted RBP15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 PCDHA6Q9UN73 950 aa15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 PCDHA8Q9Y5H6 950 aa15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 FRMPD4Q14CM0 1322 aa15.86■□□□□ 0.13
AP001269.2-201ENST00000590055 SPDYE3A6NKU9 549 aa15.85■□□□□ 0.13
AP001269.2-201ENST00000590055 ADAMTS3O15072 1205 aa15.85■□□□□ 0.13
AP001269.2-201ENST00000590055 NKRFO15226 690 aaKnown RBP eCLIP15.85■□□□□ 0.13
AP001269.2-201ENST00000590055 PFKFB2O60825 505 aa15.85■□□□□ 0.13
AP001269.2-201ENST00000590055 TRIM22Q8IYM9 498 aa15.85■□□□□ 0.13
AP001269.2-201ENST00000590055 NECAB1Q8N987 351 aa15.85■□□□□ 0.13
AP001269.2-201ENST00000590055 GLT1D1Q96MS3 346 aa15.85■□□□□ 0.13
AP001269.2-201ENST00000590055 KIF2CQ99661 725 aa15.85■□□□□ 0.13
AP001269.2-201ENST00000590055 VPS54Q9P1Q0 977 aa15.85■□□□□ 0.13
AP001269.2-201ENST00000590055 RBM27Q9P2N5 1060 aaKnown RBP15.85■□□□□ 0.13
AP001269.2-201ENST00000590055 ZEB2O60315 1214 aa15.84■□□□□ 0.13
AP001269.2-201ENST00000590055 GH1P01241 217 aa15.84■□□□□ 0.13
AP001269.2-201ENST00000590055 MYL3P08590 195 aa15.84■□□□□ 0.13
AP001269.2-201ENST00000590055 SP2Q02086 613 aa15.84■□□□□ 0.13
AP001269.2-201ENST00000590055 SNX17Q15036 470 aa15.84■□□□□ 0.13
AP001269.2-201ENST00000590055 ME3Q16798 604 aa15.84■□□□□ 0.13
AP001269.2-201ENST00000590055 PCNX4Q63HM2 1172 aa15.84■□□□□ 0.13
AP001269.2-201ENST00000590055 CPLX2Q6PUV4 134 aaKnown RBP15.84■□□□□ 0.13
AP001269.2-201ENST00000590055 DNAH12Q6ZR08 3092 aa15.83■□□□□ 0.13
AP001269.2-201ENST00000590055 CPT1AP50416 773 aa15.83■□□□□ 0.12
AP001269.2-201ENST00000590055 PSMC6P62333 389 aa15.83■□□□□ 0.12
AP001269.2-201ENST00000590055 TLE2Q04725 743 aa15.83■□□□□ 0.12
AP001269.2-201ENST00000590055 ARHGAP1Q07960 439 aa15.83■□□□□ 0.12
AP001269.2-201ENST00000590055 JAKMIP3Q5VZ66 844 aa15.83■□□□□ 0.12
AP001269.2-201ENST00000590055 AFG1LQ8WV93 481 aa15.83■□□□□ 0.12
AP001269.2-201ENST00000590055 AIFM3Q96NN9 605 aa15.83■□□□□ 0.12
AP001269.2-201ENST00000590055 BCAS3Q9H6U6 928 aa15.83■□□□□ 0.12
AP001269.2-201ENST00000590055 PQBP1O60828 265 aaKnown RBP15.82■□□□□ 0.12
AP001269.2-201ENST00000590055 CTDNEP1O95476 244 aa15.82■□□□□ 0.12
AP001269.2-201ENST00000590055 RBM25P49756 843 aaKnown RBP15.82■□□□□ 0.12
AP001269.2-201ENST00000590055 CLK2P49760 499 aaKnown RBP15.82■□□□□ 0.12
AP001269.2-201ENST00000590055 SEMA3FQ13275 785 aa15.82■□□□□ 0.12
AP001269.2-201ENST00000590055 GNPTABQ3T906 1256 aa15.82■□□□□ 0.12
AP001269.2-201ENST00000590055 DHX37Q8IY37 1157 aaKnown RBP15.82■□□□□ 0.12
AP001269.2-201ENST00000590055 CCDC12Q8WUD4 166 aaPredicted RBP15.82■□□□□ 0.12
AP001269.2-201ENST00000590055 PPP1R13LQ8WUF5 828 aa15.82■□□□□ 0.12
AP001269.2-201ENST00000590055 INPP4AQ96PE3 977 aaPredicted RBP15.82■□□□□ 0.12
AP001269.2-201ENST00000590055 ANO3Q9BYT9 981 aa15.82■□□□□ 0.12
AP001269.2-201ENST00000590055 ZMYND12Q9H0C1 365 aa15.82■□□□□ 0.12
AP001269.2-201ENST00000590055 C6orf50Q9HD87 102 aa15.82■□□□□ 0.12
AP001269.2-201ENST00000590055 ELP1O95163 1332 aa15.82■□□□□ 0.12
AP001269.2-201ENST00000590055 A0A0U1RQG5 324 aaPredicted RBP15.81■□□□□ 0.12
AP001269.2-201ENST00000590055 ESYT2A0FGR8 921 aa15.81■□□□□ 0.12
AP001269.2-201ENST00000590055 A6NJR5 290 aa15.81■□□□□ 0.12
AP001269.2-201ENST00000590055 STAM2O75886 525 aa15.81■□□□□ 0.12
AP001269.2-201ENST00000590055 DEXIO95424 95 aa15.81■□□□□ 0.12
AP001269.2-201ENST00000590055 GGPS1O95749 300 aa15.81■□□□□ 0.12
AP001269.2-201ENST00000590055 FOSP01100 380 aaPredicted RBP15.81■□□□□ 0.12
AP001269.2-201ENST00000590055 MMP3P08254 477 aa15.81■□□□□ 0.12
AP001269.2-201ENST00000590055 UBA1P22314 1058 aaKnown RBP15.81■□□□□ 0.12
AP001269.2-201ENST00000590055 CHMP4BP1P59074 171 aa15.81■□□□□ 0.12
AP001269.2-201ENST00000590055 PURAQ00577 322 aaKnown RBP15.81■□□□□ 0.12
AP001269.2-201ENST00000590055 BRDTQ58F21 947 aaPredicted RBP15.81■□□□□ 0.12
AP001269.2-201ENST00000590055 C1orf53Q5VUE5 145 aa15.81■□□□□ 0.12
AP001269.2-201ENST00000590055 XRRA1Q6P2D8 792 aa15.81■□□□□ 0.12
AP001269.2-201ENST00000590055 KCNV1Q6PIU1 500 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms