RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 TRDNQ13061 729 aa20.95■□□□□ 0.94
H3F3B-209ENST00000589949 HOMER1Q86YM7 354 aa20.95■□□□□ 0.94
H3F3B-209ENST00000589949 IGDCC4Q8TDY8 1250 aa20.95■□□□□ 0.94
H3F3B-209ENST00000589949 BAZ2BQ9UIF8 2168 aaKnown RBP20.95■□□□□ 0.94
H3F3B-209ENST00000589949 GBF1Q92538 1859 aa20.94■□□□□ 0.94
H3F3B-209ENST00000589949 VCANP13611 3396 aa20.94■□□□□ 0.94
H3F3B-209ENST00000589949 GH1P01241 217 aa20.94■□□□□ 0.94
H3F3B-209ENST00000589949 MYOGP15173 224 aa20.94■□□□□ 0.94
H3F3B-209ENST00000589949 RABGGTBP53611 331 aa20.94■□□□□ 0.94
H3F3B-209ENST00000589949 CHMP4BP1P59074 171 aa20.94■□□□□ 0.94
H3F3B-209ENST00000589949 BRDTQ58F21 947 aaPredicted RBP20.94■□□□□ 0.94
H3F3B-209ENST00000589949 DEFB128Q7Z7B8 93 aa20.94■□□□□ 0.94
H3F3B-209ENST00000589949 MB21D2Q8IYB1 491 aaPredicted RBP20.94■□□□□ 0.94
H3F3B-209ENST00000589949 ZFP91Q96JP5 570 aaPredicted RBP20.94■□□□□ 0.94
H3F3B-209ENST00000589949 PDCD2LQ9BRP1 358 aa20.94■□□□□ 0.94
H3F3B-209ENST00000589949 NKX2-4Q9H2Z4 354 aa20.94■□□□□ 0.94
H3F3B-209ENST00000589949 EIF3JO75822 258 aaKnown RBP20.93■□□□□ 0.94
H3F3B-209ENST00000589949 SKAP1Q86WV1 359 aa20.93■□□□□ 0.94
H3F3B-209ENST00000589949 NCOA7Q8NI08 942 aa20.93■□□□□ 0.94
H3F3B-209ENST00000589949 PRDM12Q9H4Q4 367 aa20.93■□□□□ 0.94
H3F3B-209ENST00000589949 RBM8AQ9Y5S9 174 aaKnown RBP20.93■□□□□ 0.94
H3F3B-209ENST00000589949 PTPN11Q06124 597 aaPredicted RBP20.92■□□□□ 0.94
H3F3B-209ENST00000589949 ADGRE1Q14246 886 aa20.92■□□□□ 0.94
H3F3B-209ENST00000589949 GPNMBQ14956 572 aa20.92■□□□□ 0.94
H3F3B-209ENST00000589949 WTAPQ15007 396 aa20.92■□□□□ 0.94
H3F3B-209ENST00000589949 GDF6Q6KF10 455 aaPredicted RBP20.92■□□□□ 0.94
H3F3B-209ENST00000589949 RALYLQ86SE5 291 aaKnown RBP20.92■□□□□ 0.94
H3F3B-209ENST00000589949 RPUSD2Q8IZ73 545 aaKnown RBP20.92■□□□□ 0.94
H3F3B-209ENST00000589949 GPKOWQ92917 476 aaPredicted RBP eCLIP20.92■□□□□ 0.945e-14■□□□□ 8.4
H3F3B-209ENST00000589949 SORBS3O60504 671 aa20.91■□□□□ 0.94
H3F3B-209ENST00000589949 IQCF3P0C7M6 154 aa20.91■□□□□ 0.94
H3F3B-209ENST00000589949 MYCLP12524 364 aaPredicted RBP20.91■□□□□ 0.94
H3F3B-209ENST00000589949 SP2Q02086 613 aa20.91■□□□□ 0.94
H3F3B-209ENST00000589949 PGM5Q15124 567 aa20.91■□□□□ 0.94
H3F3B-209ENST00000589949 TMEM67Q5HYA8 995 aa20.91■□□□□ 0.94
H3F3B-209ENST00000589949 VSIG10LQ86VR7 867 aa20.91■□□□□ 0.94
H3F3B-209ENST00000589949 DHX38Q92620 1227 aaKnown RBP20.91■□□□□ 0.94
H3F3B-209ENST00000589949 EMID1Q96A84 441 aaPredicted RBP20.91■□□□□ 0.94
H3F3B-209ENST00000589949 MYL10Q9BUA6 226 aa20.91■□□□□ 0.94
H3F3B-209ENST00000589949 BCAS3Q9H6U6 928 aa20.91■□□□□ 0.94
H3F3B-209ENST00000589949 MRVI1Q9Y6F6 885 aa20.91■□□□□ 0.94
H3F3B-209ENST00000589949 SLC4A7Q9Y6M7 1214 aa20.91■□□□□ 0.94
H3F3B-209ENST00000589949 PITPNM1O00562 1244 aa20.9■□□□□ 0.94
H3F3B-209ENST00000589949 PTGISQ16647 500 aa20.9■□□□□ 0.94
H3F3B-209ENST00000589949 SESTD1Q86VW0 696 aa20.9■□□□□ 0.94
H3F3B-209ENST00000589949 PIBF1Q8WXW3 757 aa20.9■□□□□ 0.94
H3F3B-209ENST00000589949 LSG1Q9H089 658 aaKnown RBP20.9■□□□□ 0.94
H3F3B-209ENST00000589949 LY9Q9HBG7 655 aa20.9■□□□□ 0.94
H3F3B-209ENST00000589949 PRDM6Q9NQX0 595 aa20.9■□□□□ 0.94
H3F3B-209ENST00000589949 MSRAQ9UJ68 235 aa20.9■□□□□ 0.94
H3F3B-209ENST00000589949 REV3LO60673 3130 aa20.9■□□□□ 0.94
H3F3B-209ENST00000589949 TET1Q8NFU7 2136 aa20.89■□□□□ 0.94
H3F3B-209ENST00000589949 PNMA6FA0A0J9YX94 578 aa20.89■□□□□ 0.93
H3F3B-209ENST00000589949 ZBBXA8MT70 800 aa20.89■□□□□ 0.93
H3F3B-209ENST00000589949 ZNF286BP0CG31 522 aa20.89■□□□□ 0.93
H3F3B-209ENST00000589949 HIC1Q14526 733 aa20.89■□□□□ 0.93
H3F3B-209ENST00000589949 RAB30Q15771 203 aa20.89■□□□□ 0.93
H3F3B-209ENST00000589949 FCHSD1Q86WN1 690 aa20.89■□□□□ 0.93
H3F3B-209ENST00000589949 MTIF3Q9H2K0 278 aaKnown RBP20.89■□□□□ 0.93
H3F3B-209ENST00000589949 MAP3K20Q9NYL2 800 aaKnown RBP20.89■□□□□ 0.93
H3F3B-209ENST00000589949 HDAC6Q9UBN7 1215 aa20.89■□□□□ 0.93
H3F3B-209ENST00000589949 TANC1Q9C0D5 1861 aa20.88■□□□□ 0.93
H3F3B-209ENST00000589949 ERICH2A1L162 156 aa20.88■□□□□ 0.93
H3F3B-209ENST00000589949 HAS3O00219 553 aa20.88■□□□□ 0.93
H3F3B-209ENST00000589949 HOXD8P13378 290 aaPredicted RBP20.88■□□□□ 0.93
H3F3B-209ENST00000589949 ATP2A2P16615 1042 aaKnown RBP20.88■□□□□ 0.93
H3F3B-209ENST00000589949 CASTP20810 708 aaKnown RBP20.88■□□□□ 0.93
H3F3B-209ENST00000589949 LAMC2Q13753 1193 aa20.88■□□□□ 0.93
H3F3B-209ENST00000589949 DGKDQ16760 1214 aa20.88■□□□□ 0.93
H3F3B-209ENST00000589949 HSDL1Q3SXM5 330 aa20.88■□□□□ 0.93
H3F3B-209ENST00000589949 MYSM1Q5VVJ2 828 aa20.88■□□□□ 0.93
H3F3B-209ENST00000589949 PPTC7Q8NI37 304 aa20.88■□□□□ 0.93
H3F3B-209ENST00000589949 WNT8BQ93098 351 aa20.88■□□□□ 0.93
H3F3B-209ENST00000589949 TRIP12Q14669 1992 aaPredicted RBP20.87■□□□□ 0.93
H3F3B-209ENST00000589949 MYH7BA7E2Y1 1941 aa20.87■□□□□ 0.93
H3F3B-209ENST00000589949 GCOM1H8Y6P7 765 aaPredicted RBP20.87■□□□□ 0.93
H3F3B-209ENST00000589949 ARHGEF15O94989 841 aa20.87■□□□□ 0.93
H3F3B-209ENST00000589949 F2P00734 622 aa20.87■□□□□ 0.93
H3F3B-209ENST00000589949 PFKMP08237 780 aa20.87■□□□□ 0.93
H3F3B-209ENST00000589949 POLR2MP0CAP2 368 aa20.87■□□□□ 0.93
H3F3B-209ENST00000589949 PSEN2P49810 448 aa20.87■□□□□ 0.93
H3F3B-209ENST00000589949 MRPS9P82933 396 aaKnown RBP20.87■□□□□ 0.93
H3F3B-209ENST00000589949 ZNF200P98182 395 aaPredicted RBP20.87■□□□□ 0.93
H3F3B-209ENST00000589949 TCTN1Q2MV58 587 aa20.87■□□□□ 0.93
H3F3B-209ENST00000589949 CELF3Q5SZQ8 465 aaKnown RBP20.87■□□□□ 0.93
H3F3B-209ENST00000589949 CATIPQ7Z7H3 387 aa20.87■□□□□ 0.93
H3F3B-209ENST00000589949 DHX37Q8IY37 1157 aaKnown RBP20.87■□□□□ 0.93
H3F3B-209ENST00000589949 ZNF654Q8IZM8 581 aa20.87■□□□□ 0.93
H3F3B-209ENST00000589949 ALG1Q9BT22 464 aa20.87■□□□□ 0.93
H3F3B-209ENST00000589949 GTF2IRD1Q9UHL9 959 aa20.87■□□□□ 0.93
H3F3B-209ENST00000589949 MYO9BQ13459 2157 aa20.87■□□□□ 0.93
H3F3B-209ENST00000589949 SPTBN5Q9NRC6 3674 aaKnown RBP20.86■□□□□ 0.93
H3F3B-209ENST00000589949 GGPS1O95749 300 aa20.86■□□□□ 0.93
H3F3B-209ENST00000589949 CENPBP07199 599 aaPredicted RBP20.86■□□□□ 0.93
H3F3B-209ENST00000589949 UBA1P22314 1058 aaKnown RBP20.86■□□□□ 0.93
H3F3B-209ENST00000589949 RFC2P35250 354 aa20.86■□□□□ 0.93
H3F3B-209ENST00000589949 BFSP2Q13515 415 aa20.86■□□□□ 0.93
H3F3B-209ENST00000589949 MFSD10Q14728 455 aa20.86■□□□□ 0.93
H3F3B-209ENST00000589949 SART3Q15020 963 aaKnown RBP20.86■□□□□ 0.93
H3F3B-209ENST00000589949 SAMD3Q8N6K7 520 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms