RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 PPP1R12CQ9BZL4 782 aa9.64□□□□□ -0.87
TPM4-211ENST00000589897 ANO2Q9NQ90 1003 aa9.64□□□□□ -0.87
TPM4-211ENST00000589897 MAD2L2Q9UI95 211 aa9.64□□□□□ -0.87
TPM4-211ENST00000589897 YBX2Q9Y2T7 364 aaKnown RBP9.64□□□□□ -0.87
TPM4-211ENST00000589897 PCDHA1Q9Y5I3 950 aa9.64□□□□□ -0.87
TPM4-211ENST00000589897 MTCH2Q9Y6C9 303 aa9.64□□□□□ -0.87
TPM4-211ENST00000589897 SLC4A7Q9Y6M7 1214 aa9.64□□□□□ -0.87
TPM4-211ENST00000589897 LRRC37A2A6NM11 1700 aa9.63□□□□□ -0.87
TPM4-211ENST00000589897 PALM3A6NDB9 673 aaPredicted RBP9.63□□□□□ -0.87
TPM4-211ENST00000589897 CCDC69A6NI79 296 aa9.63□□□□□ -0.87
TPM4-211ENST00000589897 CTAGE5O15320 804 aa9.63□□□□□ -0.87
TPM4-211ENST00000589897 KPNA6O60684 536 aa9.63□□□□□ -0.87
TPM4-211ENST00000589897 KIF5BP33176 963 aa9.63□□□□□ -0.87
TPM4-211ENST00000589897 MCM5P33992 734 aa9.63□□□□□ -0.87
TPM4-211ENST00000589897 CDK7P50613 346 aa9.63□□□□□ -0.87
TPM4-211ENST00000589897 CHMP4BP1P59074 171 aa9.63□□□□□ -0.87
TPM4-211ENST00000589897 NKX3-2P78367 333 aa9.63□□□□□ -0.87
TPM4-211ENST00000589897 GRM4Q14833 912 aa9.63□□□□□ -0.87
TPM4-211ENST00000589897 FAM47CQ5HY64 1035 aa9.63□□□□□ -0.87
TPM4-211ENST00000589897 RNF20Q5VTR2 975 aa9.63□□□□□ -0.87
TPM4-211ENST00000589897 SEPT14Q6ZU15 432 aa9.63□□□□□ -0.87
TPM4-211ENST00000589897 TMTC2Q8N394 836 aa9.63□□□□□ -0.87
TPM4-211ENST00000589897 SYTL5Q8TDW5 730 aaPredicted RBP9.63□□□□□ -0.87
TPM4-211ENST00000589897 PIBF1Q8WXW3 757 aa9.63□□□□□ -0.87
TPM4-211ENST00000589897 TBC1D5Q92609 795 aa9.63□□□□□ -0.87
TPM4-211ENST00000589897 TAAR1Q96RJ0 339 aa9.63□□□□□ -0.87
TPM4-211ENST00000589897 ESYT1Q9BSJ8 1104 aa9.63□□□□□ -0.87
TPM4-211ENST00000589897 BAZ2BQ9UIF8 2168 aaKnown RBP9.63□□□□□ -0.87
TPM4-211ENST00000589897 NCOR1O75376 2440 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 RBM47A0AV96 593 aaKnown RBP9.62□□□□□ -0.87
TPM4-211ENST00000589897 GCOM1H8Y6P7 765 aaPredicted RBP9.62□□□□□ -0.87
TPM4-211ENST00000589897 PRC1O43663 620 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 ST18O60284 1047 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 SUPT20HL2P0C7V6 817 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 POLR2MP0CAP2 368 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 MYCLP12524 364 aaPredicted RBP9.62□□□□□ -0.87
TPM4-211ENST00000589897 EIF2AK2P19525 551 aaKnown RBP9.62□□□□□ -0.87
TPM4-211ENST00000589897 PTGS1P23219 599 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 EDNRBP24530 442 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 PSMC6P62333 389 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 BMP2KLQ5H9B9 411 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 TMEM63BQ5T3F8 832 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 SYNE3Q6ZMZ3 975 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 OTOP2Q7RTS6 562 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 FAM126BQ8IXS8 530 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 GJD3Q8N144 294 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 CCDC136Q96JN2 1154 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 FBXL18Q96ME1 805 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 PIGSQ96S52 555 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 MTG1Q9BT17 334 aaPredicted RBP9.62□□□□□ -0.87
TPM4-211ENST00000589897 HIPK3Q9H422 1215 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 MAP3K20Q9NYL2 800 aaKnown RBP9.62□□□□□ -0.87
TPM4-211ENST00000589897 SEC63Q9UGP8 760 aaKnown RBP9.62□□□□□ -0.87
TPM4-211ENST00000589897 PIEZO1Q92508 2521 aa9.62□□□□□ -0.87
TPM4-211ENST00000589897 PNMA6FA0A0J9YX94 578 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 KIF28PB7ZC32 967 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 SLC27A2O14975 620 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 EIF3JO75822 258 aaKnown RBP9.61□□□□□ -0.87
TPM4-211ENST00000589897 DDAH1O94760 285 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 GH1P01241 217 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 NEFLP07196 543 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 NR3C2P08235 984 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 ATP2A2P16615 1042 aaKnown RBP9.61□□□□□ -0.87
TPM4-211ENST00000589897 HOXA13P31271 388 aaPredicted RBP9.61□□□□□ -0.87
TPM4-211ENST00000589897 GNAQP50148 359 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 CREB3L3Q68CJ9 461 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 STOX1Q6ZVD7 989 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 FCHSD1Q86WN1 690 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 MB21D2Q8IYB1 491 aaPredicted RBP9.61□□□□□ -0.87
TPM4-211ENST00000589897 ZNF654Q8IZM8 581 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 SAMD3Q8N6K7 520 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 IGDCC4Q8TDY8 1250 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 COPS5Q92905 334 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 KHSRPQ92945 711 aaKnown RBP eCLIP9.61□□□□□ -0.87
TPM4-211ENST00000589897 CUL5Q93034 780 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 RRP36Q96EU6 259 aaKnown RBP9.61□□□□□ -0.87
TPM4-211ENST00000589897 TMEM87BQ96K49 555 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 LZTS2Q9BRK4 669 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 LSG1Q9H089 658 aaKnown RBP9.61□□□□□ -0.87
TPM4-211ENST00000589897 PXMP2Q9NR77 195 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 NOD1Q9Y239 953 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 MRVI1Q9Y6F6 885 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 TAF6LQ9Y6J9 622 aa9.61□□□□□ -0.87
TPM4-211ENST00000589897 KIAA1217Q5T5P2 1943 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 CD4P01730 458 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 CALM1P0DP23 149 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 CALM2P0DP24 149 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 CALM3P0DP25 149 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 CASTP20810 708 aaKnown RBP9.6□□□□□ -0.87
TPM4-211ENST00000589897 CCND2P30279 289 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 SSTR3P32745 418 aaPredicted RBP9.6□□□□□ -0.87
TPM4-211ENST00000589897 CYP2C18P33260 490 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 HSD17B4P51659 736 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 RABGGTBP53611 331 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 ANTXR2P58335 489 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 PURAQ00577 322 aaKnown RBP9.6□□□□□ -0.87
TPM4-211ENST00000589897 TROAPQ12815 778 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 LY6KQ17RY6 165 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 KCNV1Q6PIU1 500 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 DHX37Q8IY37 1157 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms