RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 SYNGAP1Q96PV0 1343 aa17.27■□□□□ 0.36
ATG4D-211ENST00000589753 EDIL3O43854 480 aa17.27■□□□□ 0.36
ATG4D-211ENST00000589753 STAM2O75886 525 aa17.27■□□□□ 0.36
ATG4D-211ENST00000589753 ATP2B1P20020 1258 aa17.27■□□□□ 0.36
ATG4D-211ENST00000589753 MRPS9P82933 396 aaKnown RBP17.27■□□□□ 0.36
ATG4D-211ENST00000589753 FAM173BQ6P4H8 233 aa17.27■□□□□ 0.36
ATG4D-211ENST00000589753 RAET1EQ8TD07 263 aa17.27■□□□□ 0.36
ATG4D-211ENST00000589753 CASP8AP2Q9UKL3 1982 aa17.27■□□□□ 0.36
ATG4D-211ENST00000589753 MYH7BA7E2Y1 1941 aa17.27■□□□□ 0.35
ATG4D-211ENST00000589753 CCNT1O60563 726 aaKnown RBP17.26■□□□□ 0.35
ATG4D-211ENST00000589753 EIF3JO75822 258 aaKnown RBP17.26■□□□□ 0.35
ATG4D-211ENST00000589753 CIITAP33076 1130 aa17.26■□□□□ 0.35
ATG4D-211ENST00000589753 TOB1P50616 345 aaPredicted RBP17.26■□□□□ 0.35
ATG4D-211ENST00000589753 TTC38Q5R3I4 469 aa17.26■□□□□ 0.35
ATG4D-211ENST00000589753 MOXD1Q6UVY6 613 aa17.26■□□□□ 0.35
ATG4D-211ENST00000589753 ZFP91Q96JP5 570 aaPredicted RBP17.26■□□□□ 0.35
ATG4D-211ENST00000589753 MXRA8Q9BRK3 442 aa17.26■□□□□ 0.35
ATG4D-211ENST00000589753 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.26■□□□□ 0.35
ATG4D-211ENST00000589753 RTEL1Q9NZ71 1219 aa17.26■□□□□ 0.35
ATG4D-211ENST00000589753 ATP6V1DQ9Y5K8 247 aa17.26■□□□□ 0.35
ATG4D-211ENST00000589753 UBIAD1Q9Y5Z9 338 aa17.26■□□□□ 0.35
ATG4D-211ENST00000589753 LRRC37A2A6NM11 1700 aa17.26■□□□□ 0.35
ATG4D-211ENST00000589753 CYP3A7-CYP3A51PA0A087WV96 503 aa17.25■□□□□ 0.35
ATG4D-211ENST00000589753 FAM86B1E9PN63 330 aa17.25■□□□□ 0.35
ATG4D-211ENST00000589753 ADCY3O60266 1144 aa17.25■□□□□ 0.35
ATG4D-211ENST00000589753 TDP2O95551 362 aa17.25■□□□□ 0.35
ATG4D-211ENST00000589753 SNAI1O95863 264 aaPredicted RBP17.25■□□□□ 0.35
ATG4D-211ENST00000589753 IGHA2P01877 340 aa17.25■□□□□ 0.35
ATG4D-211ENST00000589753 FAM86B2P0C5J1 330 aa17.25■□□□□ 0.35
ATG4D-211ENST00000589753 GCFC2P16383 781 aaKnown RBP17.25■□□□□ 0.35
ATG4D-211ENST00000589753 CYP3A7P24462 503 aa17.25■□□□□ 0.35
ATG4D-211ENST00000589753 FOXD4L6Q3SYB3 417 aaPredicted RBP17.25■□□□□ 0.35
ATG4D-211ENST00000589753 CEP55Q53EZ4 464 aa17.25■□□□□ 0.35
ATG4D-211ENST00000589753 PPP4R3AQ6IN85 833 aa17.25■□□□□ 0.35
ATG4D-211ENST00000589753 FOXD4L3Q6VB84 417 aaPredicted RBP17.25■□□□□ 0.35
ATG4D-211ENST00000589753 EEPD1Q7L9B9 569 aa17.25■□□□□ 0.35
ATG4D-211ENST00000589753 PXYLP1Q8TE99 480 aa17.25■□□□□ 0.35
ATG4D-211ENST00000589753 TRIB2Q92519 343 aa17.25■□□□□ 0.35
ATG4D-211ENST00000589753 WNT7AO00755 349 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 ITGB5P18084 799 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 CYP2C19P33261 490 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 MCM7P33993 719 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 NBR1Q14596 966 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 ZNF174Q15697 407 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 GNPTABQ3T906 1256 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 MFSD14CQ5VZR4 134 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 NIPA1Q7RTP0 329 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 CTU1Q7Z7A3 348 aaKnown RBP17.24■□□□□ 0.35
ATG4D-211ENST00000589753 NLRX1Q86UT6 975 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 CYP2W1Q8TAV3 490 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 MBOAT7Q96N66 472 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 ZNF396Q96N95 335 aaPredicted RBP17.24■□□□□ 0.35
ATG4D-211ENST00000589753 INPP4AQ96PE3 977 aaPredicted RBP17.24■□□□□ 0.35
ATG4D-211ENST00000589753 ABHD16BQ9H3Z7 469 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 VTA1Q9NP79 307 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 JADE2Q9NQC1 790 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 DDX25Q9UHL0 483 aaKnown RBP17.24■□□□□ 0.35
ATG4D-211ENST00000589753 CNPY2Q9Y2B0 182 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 PTPN22Q9Y2R2 807 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 PCDHB6Q9Y5E3 794 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 PTCH2Q9Y6C5 1203 aa17.24■□□□□ 0.35
ATG4D-211ENST00000589753 MYH15Q9Y2K3 1946 aa17.23■□□□□ 0.35
ATG4D-211ENST00000589753 IGLV3-22A0A075B6J6 115 aa17.23■□□□□ 0.35
ATG4D-211ENST00000589753 MEIS1O00470 390 aa17.23■□□□□ 0.35
ATG4D-211ENST00000589753 RGS20O76081 388 aa17.23■□□□□ 0.35
ATG4D-211ENST00000589753 ELNP15502 786 aa17.23■□□□□ 0.35
ATG4D-211ENST00000589753 SETQ01105 290 aaPredicted RBP17.23■□□□□ 0.35
ATG4D-211ENST00000589753 ORC2Q13416 577 aaPredicted RBP17.23■□□□□ 0.35
ATG4D-211ENST00000589753 Q4G0T1 1027 aa17.23■□□□□ 0.35
ATG4D-211ENST00000589753 PRR16Q569H4 304 aa17.23■□□□□ 0.35
ATG4D-211ENST00000589753 SEPT14Q6ZU15 432 aa17.23■□□□□ 0.35
ATG4D-211ENST00000589753 PLA2G4DQ86XP0 818 aa17.23■□□□□ 0.35
ATG4D-211ENST00000589753 FBXO16Q8IX29 292 aaPredicted RBP17.23■□□□□ 0.35
ATG4D-211ENST00000589753 SLAIN1Q8ND83 568 aa17.23■□□□□ 0.35
ATG4D-211ENST00000589753 GPRASP2Q96D09 838 aa17.23■□□□□ 0.35
ATG4D-211ENST00000589753 WDR11Q9BZH6 1224 aa17.23■□□□□ 0.35
ATG4D-211ENST00000589753 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.23■□□□□ 0.35
ATG4D-211ENST00000589753 PCNTO95613 3336 aa17.22■□□□□ 0.35
ATG4D-211ENST00000589753 SLC37A4O43826 429 aa17.22■□□□□ 0.35
ATG4D-211ENST00000589753 NEMFO60524 1076 aa17.22■□□□□ 0.35
ATG4D-211ENST00000589753 HMGCRP04035 888 aa17.22■□□□□ 0.35
ATG4D-211ENST00000589753 DNM1Q05193 864 aaKnown RBP17.22■□□□□ 0.35
ATG4D-211ENST00000589753 MTMR1Q13613 665 aa17.22■□□□□ 0.35
ATG4D-211ENST00000589753 ACVR2BQ13705 512 aa17.22■□□□□ 0.35
ATG4D-211ENST00000589753 ATL3Q6DD88 541 aa17.22■□□□□ 0.35
ATG4D-211ENST00000589753 LENG9Q96B70 501 aa17.22■□□□□ 0.35
ATG4D-211ENST00000589753 CDHR1Q96JP9 859 aa17.22■□□□□ 0.35
ATG4D-211ENST00000589753 KATNBL1Q9H079 304 aa17.22■□□□□ 0.35
ATG4D-211ENST00000589753 NRBP1Q9UHY1 535 aa17.22■□□□□ 0.35
ATG4D-211ENST00000589753 ZHX1Q9UKY1 873 aaPredicted RBP17.22■□□□□ 0.35
ATG4D-211ENST00000589753 MCM3APO60318 1980 aa17.21■□□□□ 0.35
ATG4D-211ENST00000589753 MAFGO15525 162 aa17.21■□□□□ 0.35
ATG4D-211ENST00000589753 FIBPO43427 364 aa17.21■□□□□ 0.35
ATG4D-211ENST00000589753 ARP10275 920 aa17.21■□□□□ 0.35
ATG4D-211ENST00000589753 GRK4P32298 578 aa17.21■□□□□ 0.35
ATG4D-211ENST00000589753 ICAM3P32942 547 aa17.21■□□□□ 0.35
ATG4D-211ENST00000589753 SF3A1Q15459 793 aaKnown RBP17.21■□□□□ 0.35
ATG4D-211ENST00000589753 PRAMEF19Q5SWL8 479 aa17.21■□□□□ 0.35
ATG4D-211ENST00000589753 ANO1Q5XXA6 986 aa17.21■□□□□ 0.35
ATG4D-211ENST00000589753 POTEDQ86YR6 584 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms