RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ZNF618Q5T7W0 954 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 C12orf60Q5U649 245 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 ADGRD2Q7Z7M1 963 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 SESTD1Q86VW0 696 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 KIAA2013Q8IYS2 634 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 OR6J1Q8NGC5 347 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 KAT2BQ92831 832 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 COPS5Q92905 334 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 COL26A1Q96A83 441 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 RPGRIP1Q96KN7 1286 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 YME1L1Q96TA2 773 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 PHF7Q9BWX1 381 aaPredicted RBP7.32□□□□□ -1.24
VPS25-204ENST00000589577 OSBPL7Q9BZF2 842 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 IGFLR1Q9H665 355 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 GPHNQ9NQX3 736 aaPredicted RBP7.32□□□□□ -1.24
VPS25-204ENST00000589577 PCDHGC5Q9Y5F6 944 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 GPR179Q6PRD1 2367 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.31□□□□□ -1.24
VPS25-204ENST00000589577 MMP1P03956 469 aa7.31□□□□□ -1.24
VPS25-204ENST00000589577 AMHP03971 560 aa7.31□□□□□ -1.24
VPS25-204ENST00000589577 HOXB3P14651 431 aaPredicted RBP7.31□□□□□ -1.24
VPS25-204ENST00000589577 PDE6AP16499 860 aa7.31□□□□□ -1.24
VPS25-204ENST00000589577 DNAJB1P25685 340 aa7.31□□□□□ -1.24
VPS25-204ENST00000589577 CTNNB1P35222 781 aa7.31□□□□□ -1.24
VPS25-204ENST00000589577 NDUFV1P49821 464 aa7.31□□□□□ -1.24
VPS25-204ENST00000589577 HIC1Q14526 733 aa7.31□□□□□ -1.24
VPS25-204ENST00000589577 TMED8Q6PL24 325 aaPredicted RBP7.31□□□□□ -1.24
VPS25-204ENST00000589577 DBF4BQ8NFT6 615 aa7.31□□□□□ -1.24
VPS25-204ENST00000589577 SUSD6Q92537 303 aa7.31□□□□□ -1.24
VPS25-204ENST00000589577 TOP1MTQ969P6 601 aa7.31□□□□□ -1.24
VPS25-204ENST00000589577 LMAN2LQ9H0V9 348 aa7.31□□□□□ -1.24
VPS25-204ENST00000589577 SMOC2Q9H3U7 446 aa7.31□□□□□ -1.24
VPS25-204ENST00000589577 BARX2Q9UMQ3 279 aaPredicted RBP7.31□□□□□ -1.24
VPS25-204ENST00000589577 ARIH2O95376 493 aa7.3□□□□□ -1.24
VPS25-204ENST00000589577 BRD1O95696 1058 aa7.3□□□□□ -1.24
VPS25-204ENST00000589577 CT47B1P0C2W7 299 aaPredicted RBP7.3□□□□□ -1.24
VPS25-204ENST00000589577 ALDH5A1P51649 535 aaPredicted RBP7.3□□□□□ -1.24
VPS25-204ENST00000589577 CHMP4BP1P59074 171 aa7.3□□□□□ -1.24
VPS25-204ENST00000589577 RBM10P98175 930 aaKnown RBP7.3□□□□□ -1.24
VPS25-204ENST00000589577 G3BP1Q13283 466 aaKnown RBP eCLIP7.3□□□□□ -1.248e-8■■□□□ 13.7
VPS25-204ENST00000589577 SLFNL1Q499Z3 407 aa7.3□□□□□ -1.24
VPS25-204ENST00000589577 PLEKHG4Q58EX7 1191 aa7.3□□□□□ -1.24
VPS25-204ENST00000589577 EFHBQ8N7U6 833 aa7.3□□□□□ -1.24
VPS25-204ENST00000589577 TRERF1Q96PN7 1200 aa7.3□□□□□ -1.24
VPS25-204ENST00000589577 C11orf84Q9BUA3 381 aaPredicted RBP7.3□□□□□ -1.24
VPS25-204ENST00000589577 ARMT1Q9H993 441 aa7.3□□□□□ -1.24
VPS25-204ENST00000589577 RC3H2Q9HBD1 1191 aaKnown RBP7.3□□□□□ -1.24
VPS25-204ENST00000589577 NYAP2Q9P242 653 aa7.3□□□□□ -1.24
VPS25-204ENST00000589577 GTF2IRD1Q9UHL9 959 aa7.3□□□□□ -1.24
VPS25-204ENST00000589577 FEM1BQ9UK73 627 aa7.3□□□□□ -1.24
VPS25-204ENST00000589577 HDAC5Q9UQL6 1122 aa7.3□□□□□ -1.24
VPS25-204ENST00000589577 WDFY3Q8IZQ1 3526 aa7.3□□□□□ -1.24
VPS25-204ENST00000589577 MYH7BA7E2Y1 1941 aa7.3□□□□□ -1.24
VPS25-204ENST00000589577 ZNF532Q9HCE3 1301 aa7.29□□□□□ -1.24
VPS25-204ENST00000589577 IGKV6D-41A0A0C4DH26 115 aa7.29□□□□□ -1.24
VPS25-204ENST00000589577 KPNA6O60684 536 aa7.29□□□□□ -1.24
VPS25-204ENST00000589577 UPP2O95045 317 aa7.29□□□□□ -1.24
VPS25-204ENST00000589577 ALAS1P13196 640 aa7.29□□□□□ -1.24
VPS25-204ENST00000589577 ATF7P17544 494 aaPredicted RBP7.29□□□□□ -1.24
VPS25-204ENST00000589577 RASA1P20936 1047 aa7.29□□□□□ -1.24
VPS25-204ENST00000589577 BMPR1AP36894 532 aa7.29□□□□□ -1.24
VPS25-204ENST00000589577 SNAP25P60880 206 aa7.29□□□□□ -1.24
VPS25-204ENST00000589577 ZNF200P98182 395 aaPredicted RBP7.29□□□□□ -1.24
VPS25-204ENST00000589577 PTK7Q13308 1070 aa7.29□□□□□ -1.24
VPS25-204ENST00000589577 PPP2R5BQ15173 497 aa7.29□□□□□ -1.24
VPS25-204ENST00000589577 SLC9C2Q5TAH2 1124 aa7.29□□□□□ -1.24
VPS25-204ENST00000589577 CWF19L1Q69YN2 538 aaKnown RBP7.29□□□□□ -1.24
VPS25-204ENST00000589577 ASTLQ6HA08 431 aaPredicted RBP7.29□□□□□ -1.24
VPS25-204ENST00000589577 LRRC47Q8N1G4 583 aaKnown RBP7.29□□□□□ -1.24
VPS25-204ENST00000589577 VN1R2Q8NFZ6 395 aa7.29□□□□□ -1.24
VPS25-204ENST00000589577 CLP1Q92989 425 aaKnown RBP7.29□□□□□ -1.24
VPS25-204ENST00000589577 EAF2Q96CJ1 260 aaPredicted RBP7.29□□□□□ -1.24
VPS25-204ENST00000589577 CCDC8Q9H0W5 538 aaPredicted RBP7.29□□□□□ -1.24
VPS25-204ENST00000589577 SMC4Q9NTJ3 1288 aa7.29□□□□□ -1.24
VPS25-204ENST00000589577 HDAC6Q9UBN7 1215 aa7.29□□□□□ -1.24
VPS25-204ENST00000589577 CTDP1Q9Y5B0 961 aaPredicted RBP7.29□□□□□ -1.24
VPS25-204ENST00000589577 GCN1Q92616 2671 aaKnown RBP7.29□□□□□ -1.24
VPS25-204ENST00000589577 TTC3P53804 2025 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 RAD50Q92878 1312 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 CEP295Q9C0D2 2601 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 NKRFO15226 690 aaKnown RBP eCLIP7.28□□□□□ -1.24
VPS25-204ENST00000589577 PI15O43692 258 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 CHGBP05060 677 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 RB1P06400 928 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 MMP3P08254 477 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 GNAI3P08754 354 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 EDNRBP24530 442 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 SLFN5Q08AF3 891 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 POLA2Q14181 598 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 TKFCQ3LXA3 575 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 ALDH1L2Q3SY69 923 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 CTR9Q6PD62 1173 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 NSMFQ6X4W1 530 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 KREMEN2Q8NCW0 462 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 AFG1LQ8WV93 481 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 IFIH1Q9BYX4 1025 aaKnown RBP7.28□□□□□ -1.24
VPS25-204ENST00000589577 ATP8A2Q9NTI2 1148 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 CLIP2Q9UDT6 1046 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 NOB1Q9ULX3 412 aaKnown RBP7.28□□□□□ -1.24
VPS25-204ENST00000589577 PLAGL2Q9UPG8 496 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms