RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 FAM227BQ96M60 508 aa17.83■□□□□ 0.44
ACTN4-211ENST00000589528 RAD9AQ99638 391 aa17.83■□□□□ 0.44
ACTN4-211ENST00000589528 ALG1Q9BT22 464 aa17.83■□□□□ 0.44
ACTN4-211ENST00000589528 UBA5Q9GZZ9 404 aa17.83■□□□□ 0.44
ACTN4-211ENST00000589528 RNF41Q9H4P4 317 aaPredicted RBP17.83■□□□□ 0.44
ACTN4-211ENST00000589528 GTF2IRD1Q9UHL9 959 aa17.83■□□□□ 0.44
ACTN4-211ENST00000589528 FAM86C2PA6NEL3 165 aa17.82■□□□□ 0.44
ACTN4-211ENST00000589528 DHX16O60231 1041 aaKnown RBP17.82■□□□□ 0.44
ACTN4-211ENST00000589528 SNHG28P0DPA3 235 aa17.82■□□□□ 0.44
ACTN4-211ENST00000589528 CKBP12277 381 aa17.82■□□□□ 0.44
ACTN4-211ENST00000589528 HOXD11P31277 338 aaPredicted RBP17.82■□□□□ 0.44
ACTN4-211ENST00000589528 CDC37Q16543 378 aaPredicted RBP17.82■□□□□ 0.44
ACTN4-211ENST00000589528 ANKRD45Q5TZF3 282 aa17.82■□□□□ 0.44
ACTN4-211ENST00000589528 ARHGEF16Q5VV41 709 aa17.82■□□□□ 0.44
ACTN4-211ENST00000589528 FAM117BQ6P1L5 589 aa17.82■□□□□ 0.44
ACTN4-211ENST00000589528 CCDC62Q6P9F0 684 aa17.82■□□□□ 0.44
ACTN4-211ENST00000589528 MCF2L2Q86YR7 1114 aa17.82■□□□□ 0.44
ACTN4-211ENST00000589528 ESR2Q92731 530 aa17.82■□□□□ 0.44
ACTN4-211ENST00000589528 IWS1Q96ST2 819 aa17.82■□□□□ 0.44
ACTN4-211ENST00000589528 RMDN3Q96TC7 470 aa17.82■□□□□ 0.44
ACTN4-211ENST00000589528 HDAC6Q9UBN7 1215 aa17.82■□□□□ 0.44
ACTN4-211ENST00000589528 PCDHB15Q9Y5E8 787 aa17.82■□□□□ 0.44
ACTN4-211ENST00000589528 ZMYM6O95789 1325 aa17.81■□□□□ 0.44
ACTN4-211ENST00000589528 A0A0D9SFI3 127 aa17.81■□□□□ 0.44
ACTN4-211ENST00000589528 NBNO60934 754 aa17.81■□□□□ 0.44
ACTN4-211ENST00000589528 GJB5O95377 273 aa17.81■□□□□ 0.44
ACTN4-211ENST00000589528 PSEN2P49810 448 aa17.81■□□□□ 0.44
ACTN4-211ENST00000589528 ARHGAP1Q07960 439 aa17.81■□□□□ 0.44
ACTN4-211ENST00000589528 DHX37Q8IY37 1157 aaKnown RBP17.81■□□□□ 0.44
ACTN4-211ENST00000589528 DHX38Q92620 1227 aaKnown RBP17.81■□□□□ 0.44
ACTN4-211ENST00000589528 KAT2BQ92831 832 aa17.81■□□□□ 0.44
ACTN4-211ENST00000589528 TAAR1Q96RJ0 339 aa17.81■□□□□ 0.44
ACTN4-211ENST00000589528 CTAGE1Q96RT6 745 aa17.81■□□□□ 0.44
ACTN4-211ENST00000589528 ZKSCAN3Q9BRR0 538 aa17.81■□□□□ 0.44
ACTN4-211ENST00000589528 MAF1Q9H063 256 aa17.81■□□□□ 0.44
ACTN4-211ENST00000589528 CPVLQ9H3G5 476 aa17.81■□□□□ 0.44
ACTN4-211ENST00000589528 UBE2ZQ9H832 354 aaPredicted RBP17.81■□□□□ 0.44
ACTN4-211ENST00000589528 MICAL3Q7RTP6 2002 aa17.81■□□□□ 0.44
ACTN4-211ENST00000589528 LINC01553A4QN01 128 aa17.8■□□□□ 0.44
ACTN4-211ENST00000589528 GPR37L1O60883 481 aa17.8■□□□□ 0.44
ACTN4-211ENST00000589528 CXCL10P02778 98 aa17.8■□□□□ 0.44
ACTN4-211ENST00000589528 EIF2AK2P19525 551 aaKnown RBP17.8■□□□□ 0.44
ACTN4-211ENST00000589528 MFAP1P55081 439 aaKnown RBP17.8■□□□□ 0.44
ACTN4-211ENST00000589528 ERVK-21P61565 698 aa17.8■□□□□ 0.44
ACTN4-211ENST00000589528 RBL2Q08999 1139 aa17.8■□□□□ 0.44
ACTN4-211ENST00000589528 PTK7Q13308 1070 aa17.8■□□□□ 0.44
ACTN4-211ENST00000589528 MFSD10Q14728 455 aa17.8■□□□□ 0.44
ACTN4-211ENST00000589528 IQCA1Q86XH1 822 aa17.8■□□□□ 0.44
ACTN4-211ENST00000589528 SYTL5Q8TDW5 730 aaPredicted RBP17.8■□□□□ 0.44
ACTN4-211ENST00000589528 KAT14Q9H8E8 782 aa17.8■□□□□ 0.44
ACTN4-211ENST00000589528 SUGCTQ9HAC7 445 aa17.8■□□□□ 0.44
ACTN4-211ENST00000589528 MRPL11Q9Y3B7 192 aaKnown RBP17.8■□□□□ 0.44
ACTN4-211ENST00000589528 MRVI1Q9Y6F6 885 aa17.8■□□□□ 0.44
ACTN4-211ENST00000589528 CCDC171Q6TFL3 1326 aa17.79■□□□□ 0.44
ACTN4-211ENST00000589528 TRIM6-TRIM34B2RNG4 842 aa17.79■□□□□ 0.44
ACTN4-211ENST00000589528 ZNF286BP0CG31 522 aa17.79■□□□□ 0.44
ACTN4-211ENST00000589528 SSTR3P32745 418 aaPredicted RBP17.79■□□□□ 0.44
ACTN4-211ENST00000589528 GPNMBQ14956 572 aa17.79■□□□□ 0.44
ACTN4-211ENST00000589528 KIAA0753Q2KHM9 967 aa17.79■□□□□ 0.44
ACTN4-211ENST00000589528 CCDC178Q5BJE1 867 aa17.79■□□□□ 0.44
ACTN4-211ENST00000589528 PNMA1Q8ND90 353 aa17.79■□□□□ 0.44
ACTN4-211ENST00000589528 FBXO22Q8NEZ5 403 aa17.79■□□□□ 0.44
ACTN4-211ENST00000589528 TBC1D5Q92609 795 aa17.79■□□□□ 0.44
ACTN4-211ENST00000589528 INSL6Q9Y581 213 aa17.79■□□□□ 0.44
ACTN4-211ENST00000589528 SALL3Q9BXA9 1300 aa17.78■□□□□ 0.44
ACTN4-211ENST00000589528 KCNA5P22460 613 aa17.78■□□□□ 0.44
ACTN4-211ENST00000589528 PDE1AP54750 535 aa17.78■□□□□ 0.44
ACTN4-211ENST00000589528 NMIQ13287 307 aaPredicted RBP17.78■□□□□ 0.44
ACTN4-211ENST00000589528 LAMC2Q13753 1193 aa17.78■□□□□ 0.44
ACTN4-211ENST00000589528 ZNF618Q5T7W0 954 aa17.78■□□□□ 0.44
ACTN4-211ENST00000589528 ZNF589Q86UQ0 364 aaPredicted RBP17.78■□□□□ 0.44
ACTN4-211ENST00000589528 FBXO11Q86XK2 927 aa17.78■□□□□ 0.44
ACTN4-211ENST00000589528 DGKHQ86XP1 1220 aa17.78■□□□□ 0.44
ACTN4-211ENST00000589528 TBC1D10CQ8IV04 446 aa17.78■□□□□ 0.44
ACTN4-211ENST00000589528 ADGRF4Q8IZF3 695 aa17.78■□□□□ 0.44
ACTN4-211ENST00000589528 PPTC7Q8NI37 304 aa17.78■□□□□ 0.44
ACTN4-211ENST00000589528 KHSRPQ92945 711 aaKnown RBP eCLIP17.78■□□□□ 0.44
ACTN4-211ENST00000589528 DDX41Q9UJV9 622 aaKnown RBP17.78■□□□□ 0.44
ACTN4-211ENST00000589528 LAMA4Q16363 1823 aa17.77■□□□□ 0.44
ACTN4-211ENST00000589528 NEDD4P46934 1319 aa17.77■□□□□ 0.44
ACTN4-211ENST00000589528 EMSYQ7Z589 1322 aa17.77■□□□□ 0.44
ACTN4-211ENST00000589528 PI4K2BG5E9Z4 385 aa17.77■□□□□ 0.44
ACTN4-211ENST00000589528 ZNF213O14771 459 aa17.77■□□□□ 0.44
ACTN4-211ENST00000589528 LGR5O75473 907 aa17.77■□□□□ 0.44
ACTN4-211ENST00000589528 EIF3JO75822 258 aaKnown RBP17.77■□□□□ 0.44
ACTN4-211ENST00000589528 CFBP00751 764 aa17.77■□□□□ 0.44
ACTN4-211ENST00000589528 AMHP03971 560 aa17.77■□□□□ 0.44
ACTN4-211ENST00000589528 QRICH1Q2TAL8 776 aa17.77■□□□□ 0.44
ACTN4-211ENST00000589528 ASPRV1Q53RT3 343 aa17.77■□□□□ 0.44
ACTN4-211ENST00000589528 MYOCDQ8IZQ8 938 aa17.77■□□□□ 0.44
ACTN4-211ENST00000589528 RILPL2Q969X0 211 aa17.77■□□□□ 0.44
ACTN4-211ENST00000589528 EMID1Q96A84 441 aaPredicted RBP17.77■□□□□ 0.44
ACTN4-211ENST00000589528 VAT1LQ9HCJ6 419 aa17.77■□□□□ 0.44
ACTN4-211ENST00000589528 COL20A1Q9P218 1284 aa17.77■□□□□ 0.44
ACTN4-211ENST00000589528 CTNNA3Q9UI47 895 aa17.77■□□□□ 0.44
ACTN4-211ENST00000589528 NLRC5Q86WI3 1866 aa17.76■□□□□ 0.43
ACTN4-211ENST00000589528 F2P00734 622 aa17.76■□□□□ 0.43
ACTN4-211ENST00000589528 NR3C2P08235 984 aa17.76■□□□□ 0.43
ACTN4-211ENST00000589528 MYCLP12524 364 aaPredicted RBP17.76■□□□□ 0.43
ACTN4-211ENST00000589528 PTPROQ16827 1216 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms