RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 C7orf61Q8IZ16 206 aa20.21■□□□□ 0.83
H3F3B-207ENST00000589417 SLC43A3Q8NBI5 491 aa20.21■□□□□ 0.83
H3F3B-207ENST00000589417 SMARCC2Q8TAQ2 1214 aa20.21■□□□□ 0.83
H3F3B-207ENST00000589417 EMID1Q96A84 441 aaPredicted RBP20.21■□□□□ 0.83
H3F3B-207ENST00000589417 RNF26Q9BY78 433 aaPredicted RBP20.21■□□□□ 0.83
H3F3B-207ENST00000589417 GLT8D2Q9H1C3 349 aa20.21■□□□□ 0.83
H3F3B-207ENST00000589417 PRO3102Q9H379 93 aa20.21■□□□□ 0.83
H3F3B-207ENST00000589417 STARD7Q9NQZ5 370 aa20.21■□□□□ 0.83
H3F3B-207ENST00000589417 DDX41Q9UJV9 622 aaKnown RBP20.21■□□□□ 0.83
H3F3B-207ENST00000589417 NAP1L2Q9ULW6 460 aaPredicted RBP20.21■□□□□ 0.83
H3F3B-207ENST00000589417 STXBP3O00186 592 aa20.2■□□□□ 0.82
H3F3B-207ENST00000589417 PTGS1P23219 599 aa20.2■□□□□ 0.82
H3F3B-207ENST00000589417 CPT1AP50416 773 aa20.2■□□□□ 0.82
H3F3B-207ENST00000589417 BEX3Q00994 111 aa20.2■□□□□ 0.82
H3F3B-207ENST00000589417 PKN1Q16512 942 aa20.2■□□□□ 0.82
H3F3B-207ENST00000589417 SEPT14Q6ZU15 432 aa20.2■□□□□ 0.82
H3F3B-207ENST00000589417 IL31RAQ8NI17 732 aa20.2■□□□□ 0.82
H3F3B-207ENST00000589417 GPKOWQ92917 476 aaPredicted RBP eCLIP20.2■□□□□ 0.825e-14■□□□□ 8.4
H3F3B-207ENST00000589417 INPP4AQ96PE3 977 aaPredicted RBP20.2■□□□□ 0.82
H3F3B-207ENST00000589417 RIC8AQ9NPQ8 531 aa20.2■□□□□ 0.82
H3F3B-207ENST00000589417 KPNA6O60684 536 aa20.19■□□□□ 0.82
H3F3B-207ENST00000589417 SCG2P13521 617 aa20.19■□□□□ 0.82
H3F3B-207ENST00000589417 ICAM3P32942 547 aa20.19■□□□□ 0.82
H3F3B-207ENST00000589417 MRPS9P82933 396 aaKnown RBP20.19■□□□□ 0.82
H3F3B-207ENST00000589417 TRIM60Q495X7 471 aa20.19■□□□□ 0.82
H3F3B-207ENST00000589417 PCNX4Q63HM2 1172 aa20.19■□□□□ 0.82
H3F3B-207ENST00000589417 OR6J1Q8NGC5 347 aa20.19■□□□□ 0.82
H3F3B-207ENST00000589417 POLR3EQ9NVU0 708 aa20.19■□□□□ 0.82
H3F3B-207ENST00000589417 ALPK3Q96L96 1907 aa20.19■□□□□ 0.82
H3F3B-207ENST00000589417 ESYT2A0FGR8 921 aa20.18■□□□□ 0.82
H3F3B-207ENST00000589417 GH1P01241 217 aa20.18■□□□□ 0.82
H3F3B-207ENST00000589417 MYCLP12524 364 aaPredicted RBP20.18■□□□□ 0.82
H3F3B-207ENST00000589417 NAPAP54920 295 aa20.18■□□□□ 0.82
H3F3B-207ENST00000589417 TLE2Q04725 743 aa20.18■□□□□ 0.82
H3F3B-207ENST00000589417 ARHGAP1Q07960 439 aa20.18■□□□□ 0.82
H3F3B-207ENST00000589417 ANKRD1Q15327 319 aa20.18■□□□□ 0.82
H3F3B-207ENST00000589417 BRDTQ58F21 947 aaPredicted RBP20.18■□□□□ 0.82
H3F3B-207ENST00000589417 COPS5Q92905 334 aa20.18■□□□□ 0.82
H3F3B-207ENST00000589417 GDF15Q99988 308 aa20.18■□□□□ 0.82
H3F3B-207ENST00000589417 A0A0U1RQG5 324 aaPredicted RBP20.17■□□□□ 0.82
H3F3B-207ENST00000589417 ARVCFO00192 962 aa20.17■□□□□ 0.82
H3F3B-207ENST00000589417 FOSP01100 380 aaPredicted RBP20.17■□□□□ 0.82
H3F3B-207ENST00000589417 BMP8BP34820 402 aa20.17■□□□□ 0.82
H3F3B-207ENST00000589417 CLK2P49760 499 aaKnown RBP20.17■□□□□ 0.82
H3F3B-207ENST00000589417 LY6KQ17RY6 165 aa20.17■□□□□ 0.82
H3F3B-207ENST00000589417 CXCL17Q6UXB2 119 aa20.17■□□□□ 0.82
H3F3B-207ENST00000589417 ZMYND12Q9H0C1 365 aa20.17■□□□□ 0.82
H3F3B-207ENST00000589417 ATP11BQ9Y2G3 1177 aa20.17■□□□□ 0.82
H3F3B-207ENST00000589417 MRVI1Q9Y6F6 885 aa20.17■□□□□ 0.82
H3F3B-207ENST00000589417 MROH7Q68CQ1 1323 aa20.17■□□□□ 0.82
H3F3B-207ENST00000589417 SMCO2A6NFE2 343 aa20.16■□□□□ 0.82
H3F3B-207ENST00000589417 SPATA31C2B4DYI2 1134 aa20.16■□□□□ 0.82
H3F3B-207ENST00000589417 HOXD8P13378 290 aaPredicted RBP20.16■□□□□ 0.82
H3F3B-207ENST00000589417 CCT2P78371 535 aaKnown RBP20.16■□□□□ 0.82
H3F3B-207ENST00000589417 PURAQ00577 322 aaKnown RBP20.16■□□□□ 0.82
H3F3B-207ENST00000589417 LAMC2Q13753 1193 aa20.16■□□□□ 0.82
H3F3B-207ENST00000589417 GNPTABQ3T906 1256 aa20.16■□□□□ 0.82
H3F3B-207ENST00000589417 FAM177A1Q8N128 213 aaPredicted RBP20.16■□□□□ 0.82
H3F3B-207ENST00000589417 CCDC12Q8WUD4 166 aaPredicted RBP20.16■□□□□ 0.82
H3F3B-207ENST00000589417 NCOA5Q9HCD5 579 aaKnown RBP20.16■□□□□ 0.82
H3F3B-207ENST00000589417 ZMYND8Q9ULU4 1186 aaPredicted RBP20.16■□□□□ 0.82
H3F3B-207ENST00000589417 PCDHA6Q9UN73 950 aa20.16■□□□□ 0.82
H3F3B-207ENST00000589417 PCDHA8Q9Y5H6 950 aa20.16■□□□□ 0.82
H3F3B-207ENST00000589417 GRIN2DO15399 1336 aa20.16■□□□□ 0.82
H3F3B-207ENST00000589417 SPDYE3A6NKU9 549 aa20.15■□□□□ 0.82
H3F3B-207ENST00000589417 PFKFB2O60825 505 aa20.15■□□□□ 0.82
H3F3B-207ENST00000589417 ADCY7P51828 1080 aa20.15■□□□□ 0.82
H3F3B-207ENST00000589417 AKAP17AQ02040 695 aaKnown RBP20.15■□□□□ 0.82
H3F3B-207ENST00000589417 AP3B2Q13367 1082 aa20.15■□□□□ 0.82
H3F3B-207ENST00000589417 UBE2SQ16763 222 aa20.15■□□□□ 0.82
H3F3B-207ENST00000589417 MYSM1Q5VVJ2 828 aa20.15■□□□□ 0.82
H3F3B-207ENST00000589417 MCTP2Q6DN12 878 aa20.15■□□□□ 0.82
H3F3B-207ENST00000589417 PHKBQ93100 1093 aa20.15■□□□□ 0.82
H3F3B-207ENST00000589417 SENP7Q9BQF6 1050 aa20.15■□□□□ 0.82
H3F3B-207ENST00000589417 PDLIM7Q9NR12 457 aa20.15■□□□□ 0.82
H3F3B-207ENST00000589417 SH3GLB2Q9NR46 395 aa20.15■□□□□ 0.82
H3F3B-207ENST00000589417 TPCN1Q9ULQ1 816 aa20.15■□□□□ 0.82
H3F3B-207ENST00000589417 COLQQ9Y215 455 aaPredicted RBP20.15■□□□□ 0.82
H3F3B-207ENST00000589417 RANBP2P49792 3224 aaKnown RBP20.14■□□□□ 0.82
H3F3B-207ENST00000589417 A0A1W2PPC1 479 aa20.14■□□□□ 0.81
H3F3B-207ENST00000589417 KIAA0355O15063 1070 aa20.14■□□□□ 0.81
H3F3B-207ENST00000589417 MAFGO15525 162 aa20.14■□□□□ 0.81
H3F3B-207ENST00000589417 FIBPO43427 364 aa20.14■□□□□ 0.81
H3F3B-207ENST00000589417 AK2P54819 239 aa20.14■□□□□ 0.81
H3F3B-207ENST00000589417 SP2Q02086 613 aa20.14■□□□□ 0.81
H3F3B-207ENST00000589417 FAAP100Q0VG06 881 aa20.14■□□□□ 0.81
H3F3B-207ENST00000589417 ITGA7Q13683 1181 aa20.14■□□□□ 0.81
H3F3B-207ENST00000589417 CELF3Q5SZQ8 465 aaKnown RBP20.14■□□□□ 0.81
H3F3B-207ENST00000589417 CPLX2Q6PUV4 134 aaKnown RBP20.14■□□□□ 0.81
H3F3B-207ENST00000589417 PPTC7Q8NI37 304 aa20.14■□□□□ 0.81
H3F3B-207ENST00000589417 MTG1Q9BT17 334 aaPredicted RBP20.14■□□□□ 0.81
H3F3B-207ENST00000589417 DCDC2CA8MYV0 355 aa20.13■□□□□ 0.81
H3F3B-207ENST00000589417 MMP3P08254 477 aa20.13■□□□□ 0.81
H3F3B-207ENST00000589417 CLTBP09497 229 aa20.13■□□□□ 0.81
H3F3B-207ENST00000589417 SYN1P17600 705 aa20.13■□□□□ 0.81
H3F3B-207ENST00000589417 SEMA3FQ13275 785 aa20.13■□□□□ 0.81
H3F3B-207ENST00000589417 FAM126BQ8IXS8 530 aa20.13■□□□□ 0.81
H3F3B-207ENST00000589417 TRIM22Q8IYM9 498 aa20.13■□□□□ 0.81
H3F3B-207ENST00000589417 AFG1LQ8WV93 481 aa20.13■□□□□ 0.81
H3F3B-207ENST00000589417 VTI1AQ96AJ9 217 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms