RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGN1P30-201ENST00000589286 MZB1Q8WU39 189 aa5.33□□□□□ -1.56
HMGN1P30-201ENST00000589286 SEC14L1Q92503 715 aa5.33□□□□□ -1.56
HMGN1P30-201ENST00000589286 ALG3Q92685 438 aa5.33□□□□□ -1.56
HMGN1P30-201ENST00000589286 PTPRN2Q92932 1015 aa5.33□□□□□ -1.56
HMGN1P30-201ENST00000589286 TSPAN17Q96FV3 270 aa5.33□□□□□ -1.56
HMGN1P30-201ENST00000589286 SGPP1Q9BX95 441 aa5.33□□□□□ -1.56
HMGN1P30-201ENST00000589286 EPB41L1Q9H4G0 881 aa5.33□□□□□ -1.56
HMGN1P30-201ENST00000589286 CNTD2Q9H8S5 307 aa5.33□□□□□ -1.56
HMGN1P30-201ENST00000589286 GOLGA2P5Q9HBQ8 144 aa5.33□□□□□ -1.56
HMGN1P30-201ENST00000589286 RXFP1Q9HBX9 757 aa5.33□□□□□ -1.56
HMGN1P30-201ENST00000589286 FBLN5Q9UBX5 448 aa5.33□□□□□ -1.56
HMGN1P30-201ENST00000589286 MRPS23Q9Y3D9 190 aaKnown RBP5.33□□□□□ -1.56
HMGN1P30-201ENST00000589286 RFXAPO00287 272 aa5.32□□□□□ -1.56
HMGN1P30-201ENST00000589286 N4BP3O15049 544 aa5.32□□□□□ -1.56
HMGN1P30-201ENST00000589286 MAFKO60675 156 aa5.32□□□□□ -1.56
HMGN1P30-201ENST00000589286 C1QTNF9P0C862 333 aa5.32□□□□□ -1.56
HMGN1P30-201ENST00000589286 NTRK3Q16288 839 aa5.32□□□□□ -1.56
HMGN1P30-201ENST00000589286 FOXB2Q5VYV0 432 aa5.32□□□□□ -1.56
HMGN1P30-201ENST00000589286 KCNT2Q6UVM3 1135 aa5.32□□□□□ -1.56
HMGN1P30-201ENST00000589286 LBX2Q6XYB7 198 aa5.32□□□□□ -1.56
HMGN1P30-201ENST00000589286 NLRP10Q86W26 655 aa5.32□□□□□ -1.56
HMGN1P30-201ENST00000589286 LDHDQ86WU2 507 aa5.32□□□□□ -1.56
HMGN1P30-201ENST00000589286 EXOC2Q96KP1 924 aa5.32□□□□□ -1.56
HMGN1P30-201ENST00000589286 SIGLEC10Q96LC7 697 aa5.32□□□□□ -1.56
HMGN1P30-201ENST00000589286 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
HMGN1P30-201ENST00000589286 RNF38Q9H0F5 515 aa5.32□□□□□ -1.56
HMGN1P30-201ENST00000589286 CNOT6Q9ULM6 557 aaKnown RBP5.32□□□□□ -1.56
HMGN1P30-201ENST00000589286 SMG5Q9UPR3 1016 aaKnown RBP5.32□□□□□ -1.56
HMGN1P30-201ENST00000589286 IRAK3Q9Y616 596 aa5.32□□□□□ -1.56
HMGN1P30-201ENST00000589286 KRIT1O00522 736 aa5.31□□□□□ -1.56
HMGN1P30-201ENST00000589286 NCAM1P13591 858 aa5.31□□□□□ -1.56
HMGN1P30-201ENST00000589286 CDR1P51861 262 aa5.31□□□□□ -1.56
HMGN1P30-201ENST00000589286 KCNA10Q16322 511 aa5.31□□□□□ -1.56
HMGN1P30-201ENST00000589286 MTDHQ86UE4 582 aaKnown RBP5.31□□□□□ -1.56
HMGN1P30-201ENST00000589286 LILRB2Q8N423 598 aa5.31□□□□□ -1.56
HMGN1P30-201ENST00000589286 JMYQ8N9B5 988 aa5.31□□□□□ -1.56
HMGN1P30-201ENST00000589286 TOX2Q96NM4 488 aa5.31□□□□□ -1.56
HMGN1P30-201ENST00000589286 GCM1Q9NP62 436 aa5.31□□□□□ -1.56
HMGN1P30-201ENST00000589286 CD320Q9NPF0 282 aa5.31□□□□□ -1.56
HMGN1P30-201ENST00000589286 FBXL7Q9UJT9 491 aa5.31□□□□□ -1.56
HMGN1P30-201ENST00000589286 FAN1Q9Y2M0 1017 aa5.31□□□□□ -1.56
HMGN1P30-201ENST00000589286 NUB1Q9Y5A7 615 aa5.31□□□□□ -1.56
HMGN1P30-201ENST00000589286 HCFC2Q9Y5Z7 792 aa5.31□□□□□ -1.56
HMGN1P30-201ENST00000589286 PTCH2Q9Y6C5 1203 aa5.31□□□□□ -1.56
HMGN1P30-201ENST00000589286 DBX1A6NMT0 343 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 FAM47E-STBD1D6RA91 191 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 NPIPB6E9PJ23 425 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 HGSO14964 777 aaPredicted RBP5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 MSCO60682 206 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 EFCAB14O75071 495 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 GRK2P25098 689 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 GRK3P35626 688 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 EPHB3P54753 998 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 SPIRE1Q08AE8 756 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 ZNF385BQ569K4 471 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 STEAP3Q658P3 488 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 CIAPIN1Q6FI81 312 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 MILR1Q7Z6M3 343 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 DDX11Q96FC9 970 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 YIPF4Q9BSR8 244 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 NDOR1Q9UHB4 597 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 PALD1Q9ULE6 856 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 SIT1Q9Y3P8 196 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 TRAF6Q9Y4K3 522 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 PCDHA5Q9Y5H7 936 aa5.3□□□□□ -1.56
HMGN1P30-201ENST00000589286 SGSM2O43147 1006 aa5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 BUB1BO60566 1050 aaPredicted RBP5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 SOD2P04179 222 aa5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 KRT1P04264 644 aa5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 GNAT1P11488 350 aa5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 NCKAP1LP55160 1127 aa5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 LINC00310P59036 64 aa5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 GUCY1A3Q02108 690 aa5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 PAK1Q13153 545 aa5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 AMIGO3Q86WK7 504 aa5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 NLGN1Q8N2Q7 840 aa5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 ZSCAN18Q8TBC5 510 aaPredicted RBP5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 SH3TC2Q8TF17 1288 aa5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 KISS1RQ969F8 398 aaPredicted RBP5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 KCNJ15Q99712 375 aa5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 JAM3Q9BX67 310 aa5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 SFMBT1Q9UHJ3 866 aa5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 ZNF652Q9Y2D9 606 aa5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 KCTD3Q9Y597 815 aa5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 PCDHB4Q9Y5E5 795 aa5.29□□□□□ -1.56
HMGN1P30-201ENST00000589286 IRS2Q9Y4H2 1338 aa5.28□□□□□ -1.56
HMGN1P30-201ENST00000589286 GSTA4O15217 222 aa5.28□□□□□ -1.56
HMGN1P30-201ENST00000589286 NUAK1O60285 661 aa5.28□□□□□ -1.56
HMGN1P30-201ENST00000589286 ASGR2P07307 311 aa5.28□□□□□ -1.56
HMGN1P30-201ENST00000589286 C6orf222P0C671 652 aaPredicted RBP5.28□□□□□ -1.56
HMGN1P30-201ENST00000589286 PMLP29590 882 aa5.28□□□□□ -1.56
HMGN1P30-201ENST00000589286 EMC4Q5J8M3 183 aa5.28□□□□□ -1.56
HMGN1P30-201ENST00000589286 ETV3LQ6ZN32 361 aa5.28□□□□□ -1.56
HMGN1P30-201ENST00000589286 ZC3H18Q86VM9 953 aaKnown RBP5.28□□□□□ -1.56
HMGN1P30-201ENST00000589286 IGDCC3Q8IVU1 814 aa5.28□□□□□ -1.56
HMGN1P30-201ENST00000589286 TMEM151BQ8IW70 566 aa5.28□□□□□ -1.56
HMGN1P30-201ENST00000589286 PHOSPHO1Q8TCT1 267 aa5.28□□□□□ -1.56
HMGN1P30-201ENST00000589286 PANK1Q8TE04 598 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms