RNA–Protein interactions for RNA: ENST00000589167.1

NEDD4L-226, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-226ENST00000589167 ARMCX2Q7L311 632 aa8.24□□□□□ -1.09
NEDD4L-226ENST00000589167 RNF180Q86T96 592 aa8.24□□□□□ -1.09
NEDD4L-226ENST00000589167 ANKRD35Q8N283 1001 aa8.24□□□□□ -1.09
NEDD4L-226ENST00000589167 FAM227BQ96M60 508 aa8.24□□□□□ -1.09
NEDD4L-226ENST00000589167 LNPKQ9C0E8 428 aa8.24□□□□□ -1.09
NEDD4L-226ENST00000589167 INCENPQ9NQS7 918 aa8.24□□□□□ -1.09
NEDD4L-226ENST00000589167 RNF146Q9NTX7 359 aa8.24□□□□□ -1.09
NEDD4L-226ENST00000589167 STK17AQ9UEE5 414 aa8.24□□□□□ -1.09
NEDD4L-226ENST00000589167 SYNPO2Q9UMS6 1093 aa8.24□□□□□ -1.09
NEDD4L-226ENST00000589167 PHF24Q9UPV7 400 aa8.24□□□□□ -1.09
NEDD4L-226ENST00000589167 DIS3Q9Y2L1 958 aaKnown RBP8.24□□□□□ -1.09
NEDD4L-226ENST00000589167 TACC3Q9Y6A5 838 aa8.24□□□□□ -1.09
NEDD4L-226ENST00000589167 SYNGAP1Q96PV0 1343 aa8.24□□□□□ -1.09
NEDD4L-226ENST00000589167 LRRC37A2A6NM11 1700 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 TRIM43BA6NCK2 446 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 SOBPA7XYQ1 873 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 ATP2A1O14983 1001 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 RANBP6O60518 1105 aaKnown RBP8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 SNAI1O95863 264 aaPredicted RBP8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 MCCP23508 829 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 SLC1A4P43007 532 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 PDE1AP54750 535 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 CNTN2Q02246 1040 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 RRP12Q5JTH9 1297 aaKnown RBP8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 CCDC174Q6PII3 467 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 ZNF589Q86UQ0 364 aaPredicted RBP8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 EPS8L1Q8TE68 723 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 BADQ92934 168 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 MKL1Q969V6 931 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 TRIM43Q96BQ3 446 aaPredicted RBP8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 EVI5LQ96CN4 794 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 GMCL1Q96IK5 515 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 AGBL1Q96MI9 1066 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 FAM161BQ96MY7 647 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 ACAD9Q9H845 621 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 A1CFQ9NQ94 594 aaKnown RBP8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 TOMM22Q9NS69 142 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 MTMR10Q9NXD2 777 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 FBXO40Q9UH90 709 aa8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 DDX49Q9Y6V7 483 aaKnown RBP8.23□□□□□ -1.09
NEDD4L-226ENST00000589167 CLTBP09497 229 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 C6orf222P0C671 652 aaPredicted RBP8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 ALAS1P13196 640 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 PTGS1P23219 599 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 ITGB8P26012 769 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 ACLYP53396 1101 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 OAZ1P54368 228 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 HAND2P61296 217 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 NMIQ13287 307 aaPredicted RBP8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 HDAC1Q13547 482 aaPredicted RBP8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 ACVR2BQ13705 512 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 SHHQ15465 462 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 MAMDC4Q6UXC1 1216 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 FAM160B2Q86V87 743 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 CCDC144CPQ8IYA2 1237 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 MSL3Q8N5Y2 521 aaKnown RBP8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 SLC17A8Q8NDX2 589 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 CHST13Q8NET6 341 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 STARD7Q9NQZ5 370 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 IL17RBQ9NRM6 502 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 FAM184BQ9ULE4 1060 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 ZNFX1Q9P2E3 1918 aaKnown RBP8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 MCM3APO60318 1980 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 ZNF536O15090 1300 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 CHD9Q3L8U1 2897 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 SMCHD1A6NHR9 2005 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 CHD7Q9P2D1 2997 aa8.22□□□□□ -1.09
NEDD4L-226ENST00000589167 ORC4O43929 436 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 DUSP11O75319 330 aaKnown RBP8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 GMPRP36959 345 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 EPHB4P54760 987 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 KCNA10Q16322 511 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 CCDC144BQ3MJ40 725 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 MUM1L1Q5H9M0 696 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 C6orf118Q5T5N4 469 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 C1orf53Q5VUE5 145 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 NSMFQ6X4W1 530 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 TBC1D10CQ8IV04 446 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 FBXO16Q8IX29 292 aaPredicted RBP8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 NPAS3Q8IXF0 933 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 FAM133AQ8N9E0 248 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 CHURC1Q8WUH1 139 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 STAG1Q8WVM7 1258 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 GUCD1Q96NT3 240 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 C1QTNF2Q9BXJ5 285 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 KATNBL1Q9H079 304 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 ABHD16BQ9H3Z7 469 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 HELLSQ9NRZ9 838 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 ANAPC4Q9UJX5 808 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 CCPG1Q9ULG6 757 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 PRR12Q9ULL5 1215 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 STXBP5LQ9Y2K9 1186 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 GTF3C3Q9Y5Q9 886 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 ASTN1O14525 1302 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 FRMPD2Q68DX3 1309 aaPredicted RBP8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 CCDC171Q6TFL3 1326 aa8.21□□□□□ -1.1
NEDD4L-226ENST00000589167 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.2□□□□□ -1.1
NEDD4L-226ENST00000589167 ASGR1P07306 291 aa8.2□□□□□ -1.1
NEDD4L-226ENST00000589167 RAG1P15918 1043 aa8.2□□□□□ -1.1
NEDD4L-226ENST00000589167 CST5P28325 142 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms