RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 hCG_1642624A0A1W2PR95 340 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 TRIM43BA6NCK2 446 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 DCDC2CA8MYV0 355 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 KIAA0355O15063 1070 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 KPNA6O60684 536 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 RGS20O76081 388 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 CCND2P30279 289 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 METAP2P50579 478 aaKnown RBP eCLIP15.97■□□□□ 0.15
ERCC1-208ENST00000589165 APOBRQ0VD83 1088 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 FAAP100Q0VG06 881 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 KCNV1Q6PIU1 500 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 SMARCC2Q8TAQ2 1214 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 COPS5Q92905 334 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 TRIM43Q96BQ3 446 aaPredicted RBP15.97■□□□□ 0.15
ERCC1-208ENST00000589165 LBHD1Q9BQE6 289 aaPredicted RBP15.97■□□□□ 0.15
ERCC1-208ENST00000589165 PSTPIP2Q9H939 334 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 PRDM5Q9NQX1 630 aaPredicted RBP15.97■□□□□ 0.15
ERCC1-208ENST00000589165 DDX41Q9UJV9 622 aaKnown RBP15.97■□□□□ 0.15
ERCC1-208ENST00000589165 hCG_1984214I3L0E3 225 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 EIF5BO60841 1220 aaKnown RBP15.97■□□□□ 0.15
ERCC1-208ENST00000589165 STAM2O75886 525 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 GH1P01241 217 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 MYCLP12524 364 aaPredicted RBP15.97■□□□□ 0.15
ERCC1-208ENST00000589165 CDC27P30260 824 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 PURAQ00577 322 aaKnown RBP15.97■□□□□ 0.15
ERCC1-208ENST00000589165 LY6KQ17RY6 165 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 XRRA1Q6P2D8 792 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 USP17L6PQ6QN14 398 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 HEATR3Q7Z4Q2 680 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 SH3RF1Q7Z6J0 888 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 ZNF713Q8N859 430 aaPredicted RBP15.97■□□□□ 0.15
ERCC1-208ENST00000589165 IL31RAQ8NI17 732 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 EMID1Q96A84 441 aaPredicted RBP15.97■□□□□ 0.15
ERCC1-208ENST00000589165 CYP46A1Q9Y6A2 500 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 MRVI1Q9Y6F6 885 aa15.97■□□□□ 0.15
ERCC1-208ENST00000589165 V9GY48 417 aaPredicted RBP15.97■□□□□ 0.15
ERCC1-208ENST00000589165 TGFB3P10600 412 aa15.96■□□□□ 0.14
ERCC1-208ENST00000589165 ADD1P35611 737 aaKnown RBP15.96■□□□□ 0.14
ERCC1-208ENST00000589165 MDM2Q00987 491 aaPredicted RBP15.96■□□□□ 0.14
ERCC1-208ENST00000589165 ARHGAP1Q07960 439 aa15.96■□□□□ 0.14
ERCC1-208ENST00000589165 ITGA7Q13683 1181 aa15.96■□□□□ 0.14
ERCC1-208ENST00000589165 WWC2Q6AWC2 1192 aa15.96■□□□□ 0.14
ERCC1-208ENST00000589165 PPP1R18Q6NYC8 613 aa15.96■□□□□ 0.14
ERCC1-208ENST00000589165 FAM126BQ8IXS8 530 aa15.96■□□□□ 0.14
ERCC1-208ENST00000589165 UBE2OQ9C0C9 1292 aaKnown RBP15.96■□□□□ 0.14
ERCC1-208ENST00000589165 NAP1L2Q9ULW6 460 aaPredicted RBP15.96■□□□□ 0.14
ERCC1-208ENST00000589165 GRIN2DO15399 1336 aa15.95■□□□□ 0.14
ERCC1-208ENST00000589165 FXR1P51114 621 aaKnown RBP eCLIP15.95■□□□□ 0.14
ERCC1-208ENST00000589165 ANAPC15P60006 121 aa15.95■□□□□ 0.14
ERCC1-208ENST00000589165 TOB2Q14106 344 aaPredicted RBP15.95■□□□□ 0.14
ERCC1-208ENST00000589165 PCNX4Q63HM2 1172 aa15.95■□□□□ 0.14
ERCC1-208ENST00000589165 GPKOWQ92917 476 aaPredicted RBP eCLIP15.95■□□□□ 0.14
ERCC1-208ENST00000589165 INPP4AQ96PE3 977 aaPredicted RBP15.95■□□□□ 0.14
ERCC1-208ENST00000589165 MTG1Q9BT17 334 aaPredicted RBP15.95■□□□□ 0.14
ERCC1-208ENST00000589165 TMEM39AQ9NV64 488 aa15.95■□□□□ 0.14
ERCC1-208ENST00000589165 TBX21Q9UL17 535 aa15.95■□□□□ 0.14
ERCC1-208ENST00000589165 CD4P01730 458 aa15.94■□□□□ 0.14
ERCC1-208ENST00000589165 PDIA3P30101 505 aaKnown RBP15.94■□□□□ 0.14
ERCC1-208ENST00000589165 MRPS9P82933 396 aaKnown RBP15.94■□□□□ 0.14
ERCC1-208ENST00000589165 LAMC2Q13753 1193 aa15.94■□□□□ 0.14
ERCC1-208ENST00000589165 TDHQ8IZJ6 230 aa15.94■□□□□ 0.14
ERCC1-208ENST00000589165 AFG1LQ8WV93 481 aa15.94■□□□□ 0.14
ERCC1-208ENST00000589165 BARHL2Q9NY43 387 aa15.94■□□□□ 0.14
ERCC1-208ENST00000589165 PCDH10Q9P2E7 1040 aa15.94■□□□□ 0.14
ERCC1-208ENST00000589165 STXBP3O00186 592 aa15.93■□□□□ 0.14
ERCC1-208ENST00000589165 TLR3O15455 904 aaKnown RBP15.93■□□□□ 0.14
ERCC1-208ENST00000589165 MMP3P08254 477 aa15.93■□□□□ 0.14
ERCC1-208ENST00000589165 MYL3P08590 195 aa15.93■□□□□ 0.14
ERCC1-208ENST00000589165 ITGB8P26012 769 aa15.93■□□□□ 0.14
ERCC1-208ENST00000589165 ICAM3P32942 547 aa15.93■□□□□ 0.14
ERCC1-208ENST00000589165 NAPAP54920 295 aa15.93■□□□□ 0.14
ERCC1-208ENST00000589165 PSMC6P62333 389 aa15.93■□□□□ 0.14
ERCC1-208ENST00000589165 GNPTABQ3T906 1256 aa15.93■□□□□ 0.14
ERCC1-208ENST00000589165 TYW1BQ6NUM6 668 aa15.93■□□□□ 0.14
ERCC1-208ENST00000589165 PPTC7Q8NI37 304 aa15.93■□□□□ 0.14
ERCC1-208ENST00000589165 BADQ92934 168 aa15.93■□□□□ 0.14
ERCC1-208ENST00000589165 IL17RAQ96F46 866 aa15.93■□□□□ 0.14
ERCC1-208ENST00000589165 UPF3BQ9BZI7 483 aaKnown RBP15.93■□□□□ 0.14
ERCC1-208ENST00000589165 GLT8D2Q9H1C3 349 aa15.93■□□□□ 0.14
ERCC1-208ENST00000589165 RIC8AQ9NPQ8 531 aa15.93■□□□□ 0.14
ERCC1-208ENST00000589165 PRPF3O43395 683 aaKnown RBP15.92■□□□□ 0.14
ERCC1-208ENST00000589165 TIMP1P01033 207 aa15.92■□□□□ 0.14
ERCC1-208ENST00000589165 HOXD8P13378 290 aaPredicted RBP15.92■□□□□ 0.14
ERCC1-208ENST00000589165 RAG1P15918 1043 aa15.92■□□□□ 0.14
ERCC1-208ENST00000589165 NTRK3Q16288 839 aa15.92■□□□□ 0.14
ERCC1-208ENST00000589165 PFKFB3Q16875 520 aaPredicted RBP15.92■□□□□ 0.14
ERCC1-208ENST00000589165 CELF3Q5SZQ8 465 aaKnown RBP15.92■□□□□ 0.14
ERCC1-208ENST00000589165 MYSM1Q5VVJ2 828 aa15.92■□□□□ 0.14
ERCC1-208ENST00000589165 NFRKBQ6P4R8 1299 aa15.92■□□□□ 0.14
ERCC1-208ENST00000589165 DHX37Q8IY37 1157 aaKnown RBP15.92■□□□□ 0.14
ERCC1-208ENST00000589165 ZNF274Q96GC6 653 aaPredicted RBP15.92■□□□□ 0.14
ERCC1-208ENST00000589165 SPDYE3A6NKU9 549 aa15.91■□□□□ 0.14
ERCC1-208ENST00000589165 SPATA31C2B4DYI2 1134 aa15.91■□□□□ 0.14
ERCC1-208ENST00000589165 SCG2P13521 617 aa15.91■□□□□ 0.14
ERCC1-208ENST00000589165 IFNAR1P17181 557 aa15.91■□□□□ 0.14
ERCC1-208ENST00000589165 UBA1P22314 1058 aaKnown RBP15.91■□□□□ 0.14
ERCC1-208ENST00000589165 SP2Q02086 613 aa15.91■□□□□ 0.14
ERCC1-208ENST00000589165 DGKDQ16760 1214 aa15.91■□□□□ 0.14
ERCC1-208ENST00000589165 UBE2SQ16763 222 aa15.91■□□□□ 0.14
ERCC1-208ENST00000589165 LRIT3Q3SXY7 679 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms