RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 CBX8Q9HC52 389 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 RAVER2Q9HCJ3 691 aaKnown RBP13.6□□□□□ -0.23
CCBE1-203ENST00000589116 HOXC10Q9NYD6 342 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 PCDHA5Q9Y5H7 936 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 A0A0G2JLL6 359 aaPredicted RBP13.59□□□□□ -0.23
CCBE1-203ENST00000589116 MARCH6O60337 910 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 MYL1P05976 194 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 ALAS1P13196 640 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 SARSP49591 514 aaKnown RBP13.59□□□□□ -0.23
CCBE1-203ENST00000589116 PPIL2Q13356 520 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 KARSQ15046 597 aaKnown RBP13.59□□□□□ -0.23
CCBE1-203ENST00000589116 RRAGBQ5VZM2 374 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 C11orf57Q6ZUT1 292 aaPredicted RBP13.59□□□□□ -0.23
CCBE1-203ENST00000589116 PRRT2Q7Z6L0 340 aaPredicted RBP13.59□□□□□ -0.23
CCBE1-203ENST00000589116 FCHSD1Q86WN1 690 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 CPXCR1Q8N123 301 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 CALML4Q96GE6 196 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 PAGE5Q96GU1 130 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 FAM20AQ96MK3 541 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 TTC12Q9H892 705 aaPredicted RBP13.59□□□□□ -0.23
CCBE1-203ENST00000589116 ELP3Q9H9T3 547 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 LRWD1Q9UFC0 647 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 KCNH4Q9UQ05 1017 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.59□□□□□ -0.23
CCBE1-203ENST00000589116 PP2D1A8MPX8 630 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 CDC25AP30304 524 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 TKFCQ3LXA3 575 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 DPCR1Q3MIW9 517 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 RPTORQ8N122 1335 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 TBC1D5Q92609 795 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 LENG9Q96B70 501 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 PCDHA12Q9UN75 941 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 TLL2Q9Y6L7 1015 aa13.59□□□□□ -0.23
CCBE1-203ENST00000589116 FRMPD4Q14CM0 1322 aa13.58□□□□□ -0.24
CCBE1-203ENST00000589116 SPDYE16A6NNV3 312 aaPredicted RBP13.58□□□□□ -0.24
CCBE1-203ENST00000589116 NFIBO00712 420 aa13.58□□□□□ -0.24
CCBE1-203ENST00000589116 GTPBP6O43824 516 aaPredicted RBP13.58□□□□□ -0.24
CCBE1-203ENST00000589116 PRR29P0C7W0 189 aa13.58□□□□□ -0.24
CCBE1-203ENST00000589116 HOXA7P31268 230 aaPredicted RBP13.58□□□□□ -0.24
CCBE1-203ENST00000589116 ZNF76P36508 570 aa13.58□□□□□ -0.24
CCBE1-203ENST00000589116 FMR1Q06787 632 aaKnown RBP eCLIP13.58□□□□□ -0.24
CCBE1-203ENST00000589116 DPYDQ12882 1025 aa13.58□□□□□ -0.24
CCBE1-203ENST00000589116 SEMA3FQ13275 785 aa13.58□□□□□ -0.24
CCBE1-203ENST00000589116 IQCB1Q15051 598 aa13.58□□□□□ -0.24
CCBE1-203ENST00000589116 PRR16Q569H4 304 aa13.58□□□□□ -0.24
CCBE1-203ENST00000589116 LDLRAD1Q5T700 205 aa13.58□□□□□ -0.24
CCBE1-203ENST00000589116 KRT79Q5XKE5 535 aa13.58□□□□□ -0.24
CCBE1-203ENST00000589116 ETNPPLQ8TBG4 499 aa13.58□□□□□ -0.24
CCBE1-203ENST00000589116 OTUD5Q96G74 571 aa13.58□□□□□ -0.24
CCBE1-203ENST00000589116 GSDMAQ96QA5 445 aa13.58□□□□□ -0.24
CCBE1-203ENST00000589116 PPP1R9BQ96SB3 815 aa13.58□□□□□ -0.24
CCBE1-203ENST00000589116 MMTAG2Q9BU76 263 aaKnown RBP13.58□□□□□ -0.24
CCBE1-203ENST00000589116 TEX13BQ9BXU2 312 aa13.58□□□□□ -0.24
CCBE1-203ENST00000589116 STK17AQ9UEE5 414 aa13.58□□□□□ -0.24
CCBE1-203ENST00000589116 ZNF214Q9UL59 606 aaPredicted RBP13.58□□□□□ -0.24
CCBE1-203ENST00000589116 STK24Q9Y6E0 443 aa13.58□□□□□ -0.24
CCBE1-203ENST00000589116 KDM3AQ9Y4C1 1321 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 FAM86B1E9PN63 330 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 BIN1O00499 593 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 IRF6O14896 467 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 FAM86B2P0C5J1 330 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 PLCG1P19174 1290 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 AFMP43652 599 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 FKBP1BP68106 108 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 SETQ01105 290 aaPredicted RBP13.57□□□□□ -0.24
CCBE1-203ENST00000589116 NAALADL2Q58DX5 795 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 LUZP1Q86V48 1076 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 GRAMD1CQ8IYS0 662 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 MB21D1Q8N884 522 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 CNKSR2Q8WXI2 1034 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 CLMNQ96JQ2 1002 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 PDLIM2Q96JY6 352 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 TRERF1Q96PN7 1200 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 RNF146Q9NTX7 359 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 DACH1Q9UI36 760 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 MAN1B1Q9UKM7 699 aa13.57□□□□□ -0.24
CCBE1-203ENST00000589116 IGLV3-22A0A075B6J6 115 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 POTEMA6NI47 508 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 BECN2A8MW95 431 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 GOLGA6L19H0YKK7 550 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 MORC3Q14149 939 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 MUM1L1Q5H9M0 696 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 CT47A1Q5JQC4 288 aaPredicted RBP13.56□□□□□ -0.24
CCBE1-203ENST00000589116 SNRNP48Q6IEG0 339 aaKnown RBP13.56□□□□□ -0.24
CCBE1-203ENST00000589116 MOB2Q70IA6 237 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 MLKLQ8NB16 471 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 WNK4Q96J92 1243 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 CDK5RAP3Q96JB5 506 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 KBTBD4Q9NVX7 518 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 TMEM132BQ14DG7 1078 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 CEP55Q53EZ4 464 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 HYIQ5T013 277 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 TREML2Q5T2D2 321 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 CST9Q5W186 159 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 HAUS3Q68CZ6 603 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 LBX2Q6XYB7 198 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 GADL1Q6ZQY3 521 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 RNF207Q6ZRF8 634 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 FASTKD5Q7L8L6 764 aaKnown RBP13.56□□□□□ -0.24
CCBE1-203ENST00000589116 NIPA1Q7RTP0 329 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms