RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 IL27Q8NEV9 243 aa11.12□□□□□ -0.63
APOC1-204ENST00000589078 SMARCC2Q8TAQ2 1214 aa11.12□□□□□ -0.63
APOC1-204ENST00000589078 PURBQ96QR8 312 aaKnown RBP11.12□□□□□ -0.63
APOC1-204ENST00000589078 SLKQ9H2G2 1235 aaPredicted RBP11.12□□□□□ -0.63
APOC1-204ENST00000589078 XPNPEP3Q9NQH7 507 aa11.12□□□□□ -0.63
APOC1-204ENST00000589078 FAM217BQ9NTX9 383 aaPredicted RBP11.12□□□□□ -0.63
APOC1-204ENST00000589078 PLXNA1Q9UIW2 1896 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 PIK3CDO00329 1044 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 OPLAHO14841 1288 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 DUSP11O75319 330 aaKnown RBP11.11□□□□□ -0.63
APOC1-204ENST00000589078 CLTBP09497 229 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 SCG2P13521 617 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 IFNAR1P17181 557 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 EIF2AK2P19525 551 aaKnown RBP11.11□□□□□ -0.63
APOC1-204ENST00000589078 EDNRBP24530 442 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 HOXA13P31271 388 aaPredicted RBP11.11□□□□□ -0.63
APOC1-204ENST00000589078 TNFAIP2Q03169 654 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 FUT2Q10981 343 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 LRRC41Q15345 812 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 PFKFB3Q16875 520 aaPredicted RBP11.11□□□□□ -0.63
APOC1-204ENST00000589078 IQSEC1Q6DN90 963 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 EEPD1Q7L9B9 569 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 FCHSD1Q86WN1 690 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 FBXO16Q8IX29 292 aaPredicted RBP11.11□□□□□ -0.63
APOC1-204ENST00000589078 SCFD2Q8WU76 684 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 PPM1EQ8WY54 764 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 TBC1D5Q92609 795 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 TAAR1Q96RJ0 339 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 RNF26Q9BY78 433 aaPredicted RBP11.11□□□□□ -0.63
APOC1-204ENST00000589078 AP5M1Q9H0R1 490 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 EHMT1Q9H9B1 1298 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 PXMP2Q9NR77 195 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 BARHL2Q9NY43 387 aa11.11□□□□□ -0.63
APOC1-204ENST00000589078 ASTN1O14525 1302 aa11.1□□□□□ -0.63
APOC1-204ENST00000589078 SPDYE3A6NKU9 549 aa11.1□□□□□ -0.63
APOC1-204ENST00000589078 PRPF3O43395 683 aaKnown RBP11.1□□□□□ -0.63
APOC1-204ENST00000589078 PQBP1O60828 265 aaKnown RBP11.1□□□□□ -0.63
APOC1-204ENST00000589078 EIF3JO75822 258 aaKnown RBP11.1□□□□□ -0.63
APOC1-204ENST00000589078 CCND2P30279 289 aa11.1□□□□□ -0.63
APOC1-204ENST00000589078 RBM25P49756 843 aaKnown RBP11.1□□□□□ -0.63
APOC1-204ENST00000589078 ADCY7P51828 1080 aa11.1□□□□□ -0.63
APOC1-204ENST00000589078 AK2P54819 239 aa11.1□□□□□ -0.63
APOC1-204ENST00000589078 FPGSQ05932 587 aa11.1□□□□□ -0.63
APOC1-204ENST00000589078 SSRP1Q08945 709 aaKnown RBP11.1□□□□□ -0.63
APOC1-204ENST00000589078 STK3Q13188 491 aa11.1□□□□□ -0.63
APOC1-204ENST00000589078 BRDTQ58F21 947 aaPredicted RBP11.1□□□□□ -0.63
APOC1-204ENST00000589078 C1orf53Q5VUE5 145 aa11.1□□□□□ -0.63
APOC1-204ENST00000589078 WWC2Q6AWC2 1192 aa11.1□□□□□ -0.63
APOC1-204ENST00000589078 CCDC148Q8NFR7 591 aa11.1□□□□□ -0.63
APOC1-204ENST00000589078 ADAMTS19Q8TE59 1207 aa11.1□□□□□ -0.63
APOC1-204ENST00000589078 GPKOWQ92917 476 aaPredicted RBP eCLIP11.1□□□□□ -0.63
APOC1-204ENST00000589078 FAM122AQ96E09 287 aa11.1□□□□□ -0.63
APOC1-204ENST00000589078 LARP6Q9BRS8 491 aaKnown RBP11.1□□□□□ -0.63
APOC1-204ENST00000589078 SLC26A6Q9BXS9 759 aa11.1□□□□□ -0.63
APOC1-204ENST00000589078 KATNBL1Q9H079 304 aa11.1□□□□□ -0.63
APOC1-204ENST00000589078 ZNF576Q9H609 170 aa11.1□□□□□ -0.63
APOC1-204ENST00000589078 NCOA5Q9HCD5 579 aaKnown RBP11.1□□□□□ -0.63
APOC1-204ENST00000589078 COL20A1Q9P218 1284 aa11.1□□□□□ -0.63
APOC1-204ENST00000589078 STXBP3O00186 592 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 KIAA0355O15063 1070 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 NKRFO15226 690 aaKnown RBP eCLIP11.09□□□□□ -0.63
APOC1-204ENST00000589078 ST18O60284 1047 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 ZEB2O60315 1214 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 PFKFB2O60825 505 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 STAM2O75886 525 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 FOSP01100 380 aaPredicted RBP11.09□□□□□ -0.63
APOC1-204ENST00000589078 NR3C2P08235 984 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 RAG1P15918 1043 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 TTLL4Q14679 1199 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 RABEP1Q15276 862 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 MCTP2Q6DN12 878 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 XRRA1Q6P2D8 792 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 KCNV1Q6PIU1 500 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 PCSK9Q8NBP7 692 aaKnown RBP11.09□□□□□ -0.63
APOC1-204ENST00000589078 BICD2Q8TD16 824 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 ATXN2LQ8WWM7 1075 aaKnown RBP11.09□□□□□ -0.63
APOC1-204ENST00000589078 PHKBQ93100 1093 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 TIFAQ96CG3 184 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 PDCD2LQ9BRP1 358 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 WDR11Q9BZH6 1224 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 C6orf50Q9HD87 102 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 THEGQ9P2T0 379 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 TPCN1Q9ULQ1 816 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 PHF24Q9UPV7 400 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 Q9Y3F1 56 aa11.09□□□□□ -0.63
APOC1-204ENST00000589078 GBF1Q92538 1859 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 ZNFX1Q9P2E3 1918 aaKnown RBP11.08□□□□□ -0.64
APOC1-204ENST00000589078 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.08□□□□□ -0.64
APOC1-204ENST00000589078 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.08□□□□□ -0.64
APOC1-204ENST00000589078 RBM47A0AV96 593 aaKnown RBP11.08□□□□□ -0.64
APOC1-204ENST00000589078 SMCO2A6NFE2 343 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 MEIS2O14770 477 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 DEXIO95424 95 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 PGK1P00558 417 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 C6orf222P0C671 652 aaPredicted RBP11.08□□□□□ -0.64
APOC1-204ENST00000589078 MYCLP12524 364 aaPredicted RBP11.08□□□□□ -0.64
APOC1-204ENST00000589078 XBP1P17861 261 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 GNA11P29992 359 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 GJA9P57773 515 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 NTRK3Q16288 839 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms