RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 BRMS1Q9HCU9 246 aa21.68■■□□□ 1.06
CLPTM1-209ENST00000588855 HMX1Q9NP08 348 aaPredicted RBP21.68■■□□□ 1.06
CLPTM1-209ENST00000588855 PDGFCQ9NRA1 345 aa21.68■■□□□ 1.06
CLPTM1-209ENST00000588855 HSP90AA1P07900 732 aaKnown RBP21.67■■□□□ 1.06
CLPTM1-209ENST00000588855 TAPT1Q6NXT6 567 aa21.67■■□□□ 1.06
CLPTM1-209ENST00000588855 TNFRSF25Q93038 417 aa21.67■■□□□ 1.06
CLPTM1-209ENST00000588855 BTBD18B2RXH4 712 aa21.66■■□□□ 1.06
CLPTM1-209ENST00000588855 EIF3JO75822 258 aaKnown RBP21.66■■□□□ 1.06
CLPTM1-209ENST00000588855 ARHGAP4P98171 946 aa21.66■■□□□ 1.06
CLPTM1-209ENST00000588855 CCDC144BQ3MJ40 725 aa21.66■■□□□ 1.06
CLPTM1-209ENST00000588855 TNS4Q8IZW8 715 aa21.66■■□□□ 1.06
CLPTM1-209ENST00000588855 SPRYD3Q8NCJ5 442 aa21.66■■□□□ 1.06
CLPTM1-209ENST00000588855 CRYGNQ8WXF5 182 aa21.66■■□□□ 1.06
CLPTM1-209ENST00000588855 RNF208Q9H0X6 261 aa21.66■■□□□ 1.06
CLPTM1-209ENST00000588855 ADCY6O43306 1168 aa21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 RGS20O76081 388 aa21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 ADCYAP1R1P41586 468 aa21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 BECN1Q14457 450 aa21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 SAFBQ15424 915 aaKnown RBP eCLIP21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 EARS2Q5JPH6 523 aaKnown RBP21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 LARP1BQ659C4 914 aaKnown RBP21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 KRT25Q7Z3Z0 450 aa21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 PAK6Q9NQU5 681 aaPredicted RBP21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 RTEL1Q9NZ71 1219 aa21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 CCDC194A0A1B0GVG4 234 aa21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 FAM205CA6NFA0 338 aa21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 SEPT4O43236 478 aa21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 AKR1A1P14550 325 aa21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 NONOQ15233 471 aaKnown RBP eCLIP21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 ANO1Q5XXA6 986 aa21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 XRRA1Q6P2D8 792 aa21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 SEPT14Q6ZU15 432 aa21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 PIK3AP1Q6ZUJ8 805 aa21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 TBCKQ8TEA7 893 aa21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 LENG1Q96BZ8 264 aaPredicted RBP21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 ABHD8Q96I13 439 aa21.65■■□□□ 1.06
CLPTM1-209ENST00000588855 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.64■■□□□ 1.05
CLPTM1-209ENST00000588855 RBM47A0AV96 593 aaKnown RBP21.64■■□□□ 1.05
CLPTM1-209ENST00000588855 H3BQV1 296 aa21.64■■□□□ 1.05
CLPTM1-209ENST00000588855 TMEM63BQ5T3F8 832 aa21.64■■□□□ 1.05
CLPTM1-209ENST00000588855 IFFO2Q5TF58 517 aa21.64■■□□□ 1.05
CLPTM1-209ENST00000588855 INPP4AQ96PE3 977 aaPredicted RBP21.64■■□□□ 1.05
CLPTM1-209ENST00000588855 DDX20Q9UHI6 824 aaKnown RBP21.64■■□□□ 1.05
CLPTM1-209ENST00000588855 FAM184BQ9ULE4 1060 aa21.64■■□□□ 1.05
CLPTM1-209ENST00000588855 DOCK5Q9H7D0 1870 aa21.63■■□□□ 1.05
CLPTM1-209ENST00000588855 KIF28PB7ZC32 967 aa21.63■■□□□ 1.05
CLPTM1-209ENST00000588855 EDIL3O43854 480 aa21.63■■□□□ 1.05
CLPTM1-209ENST00000588855 STAM2O75886 525 aa21.63■■□□□ 1.05
CLPTM1-209ENST00000588855 ARIH2O95376 493 aa21.63■■□□□ 1.05
CLPTM1-209ENST00000588855 INF2Q27J81 1249 aa21.63■■□□□ 1.05
CLPTM1-209ENST00000588855 SCFD2Q8WU76 684 aa21.63■■□□□ 1.05
CLPTM1-209ENST00000588855 DEFB118Q96PH6 123 aa21.63■■□□□ 1.05
CLPTM1-209ENST00000588855 UBIAD1Q9Y5Z9 338 aa21.63■■□□□ 1.05
CLPTM1-209ENST00000588855 KIAA0100Q14667 2235 aaKnown RBP21.63■■□□□ 1.05
CLPTM1-209ENST00000588855 CYP3A4P08684 503 aa21.62■■□□□ 1.05
CLPTM1-209ENST00000588855 ITGB5P18084 799 aa21.62■■□□□ 1.05
CLPTM1-209ENST00000588855 PTGS1P23219 599 aa21.62■■□□□ 1.05
CLPTM1-209ENST00000588855 WDR11Q9BZH6 1224 aa21.62■■□□□ 1.05
CLPTM1-209ENST00000588855 FOXP1Q9H334 677 aaPredicted RBP21.62■■□□□ 1.05
CLPTM1-209ENST00000588855 SMPD1P17405 629 aa21.61■■□□□ 1.05
CLPTM1-209ENST00000588855 PDCP20941 246 aa21.61■■□□□ 1.05
CLPTM1-209ENST00000588855 SYT1P21579 422 aa21.61■■□□□ 1.05
CLPTM1-209ENST00000588855 TNFAIP2Q03169 654 aa21.61■■□□□ 1.05
CLPTM1-209ENST00000588855 SEMA3FQ13275 785 aa21.61■■□□□ 1.05
CLPTM1-209ENST00000588855 GNPTABQ3T906 1256 aa21.61■■□□□ 1.05
CLPTM1-209ENST00000588855 GJC2Q5T442 439 aaPredicted RBP21.61■■□□□ 1.05
CLPTM1-209ENST00000588855 IQSEC1Q6DN90 963 aa21.61■■□□□ 1.05
CLPTM1-209ENST00000588855 CYP2W1Q8TAV3 490 aa21.61■■□□□ 1.05
CLPTM1-209ENST00000588855 VPS37CA5D8V6 355 aaPredicted RBP21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 ZNF76P36508 570 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 GNL2Q13823 731 aaKnown RBP21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 LHX8Q68G74 356 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 MCTP1Q6DN14 999 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 CCDC62Q6P9F0 684 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 MXRA8Q9BRK3 442 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 MRVI1Q9Y6F6 885 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 FAM86B1E9PN63 330 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 MSCO60682 206 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 GJB1P08034 283 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 FAM86B2P0C5J1 330 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 TXNP10599 105 aaKnown RBP21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 TTLL4Q14679 1199 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 CEP55Q53EZ4 464 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 NEK8Q86SG6 692 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 NLRX1Q86UT6 975 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 NOSTRINQ8IVI9 506 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 COPS5Q92905 334 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 GPRASP2Q96D09 838 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 TMEM106CQ9BVX2 250 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 JADE2Q9NQC1 790 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 TSHZ2Q9NRE2 1034 aa21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 GNEQ9Y223 722 aaKnown RBP21.6■■□□□ 1.05
CLPTM1-209ENST00000588855 IGLV3-22A0A075B6J6 115 aa21.59■■□□□ 1.05
CLPTM1-209ENST00000588855 FIBPO43427 364 aa21.59■■□□□ 1.05
CLPTM1-209ENST00000588855 TDP2O95551 362 aa21.59■■□□□ 1.05
CLPTM1-209ENST00000588855 RARBP10826 455 aa21.59■■□□□ 1.05
CLPTM1-209ENST00000588855 U2AF2P26368 475 aaKnown RBP eCLIP21.59■■□□□ 1.05
CLPTM1-209ENST00000588855 ICAM3P32942 547 aa21.59■■□□□ 1.05
CLPTM1-209ENST00000588855 CIITAP33076 1130 aa21.59■■□□□ 1.05
CLPTM1-209ENST00000588855 USP11P51784 963 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms