RNA–Protein interactions for RNA: ENST00000588750.5

APOC1-202, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-202ENST00000588750 WDR11Q9BZH6 1224 aa9.36□□□□□ -0.91
APOC1-202ENST00000588750 VPS54Q9P1Q0 977 aa9.36□□□□□ -0.91
APOC1-202ENST00000588750 MRVI1Q9Y6F6 885 aa9.36□□□□□ -0.91
APOC1-202ENST00000588750 SMCHD1A6NHR9 2005 aa9.36□□□□□ -0.91
APOC1-202ENST00000588750 CCDC194A0A1B0GVG4 234 aa9.35□□□□□ -0.91
APOC1-202ENST00000588750 MOXD2PA6NHM9 499 aa9.35□□□□□ -0.91
APOC1-202ENST00000588750 FIBPO43427 364 aa9.35□□□□□ -0.91
APOC1-202ENST00000588750 CABYRO75952 493 aa9.35□□□□□ -0.91
APOC1-202ENST00000588750 FARP2O94887 1054 aaPredicted RBP9.35□□□□□ -0.91
APOC1-202ENST00000588750 C6orf222P0C671 652 aaPredicted RBP9.35□□□□□ -0.91
APOC1-202ENST00000588750 TXNP10599 105 aaKnown RBP9.35□□□□□ -0.91
APOC1-202ENST00000588750 PDIA4P13667 645 aaKnown RBP9.35□□□□□ -0.91
APOC1-202ENST00000588750 TAL1P17542 331 aaPredicted RBP9.35□□□□□ -0.91
APOC1-202ENST00000588750 SOX10P56693 466 aa9.35□□□□□ -0.91
APOC1-202ENST00000588750 SETQ01105 290 aaPredicted RBP9.35□□□□□ -0.91
APOC1-202ENST00000588750 GNL2Q13823 731 aaKnown RBP9.35□□□□□ -0.91
APOC1-202ENST00000588750 NEDD9Q14511 834 aa9.35□□□□□ -0.91
APOC1-202ENST00000588750 PRAMEF19Q5SWL8 479 aa9.35□□□□□ -0.91
APOC1-202ENST00000588750 IFFO2Q5TF58 517 aa9.35□□□□□ -0.91
APOC1-202ENST00000588750 LHX8Q68G74 356 aa9.35□□□□□ -0.91
APOC1-202ENST00000588750 SEPT14Q6ZU15 432 aa9.35□□□□□ -0.91
APOC1-202ENST00000588750 EEPD1Q7L9B9 569 aa9.35□□□□□ -0.91
APOC1-202ENST00000588750 KRT25Q7Z3Z0 450 aa9.35□□□□□ -0.91
APOC1-202ENST00000588750 NECAB2Q7Z6G3 386 aa9.35□□□□□ -0.91
APOC1-202ENST00000588750 FBXO16Q8IX29 292 aaPredicted RBP9.35□□□□□ -0.91
APOC1-202ENST00000588750 NSUN7Q8NE18 718 aaKnown RBP9.35□□□□□ -0.91
APOC1-202ENST00000588750 GPRASP2Q96D09 838 aa9.35□□□□□ -0.91
APOC1-202ENST00000588750 C8orf76Q96K31 380 aa9.35□□□□□ -0.91
APOC1-202ENST00000588750 ANO3Q9BYT9 981 aa9.35□□□□□ -0.91
APOC1-202ENST00000588750 COL20A1Q9P218 1284 aa9.35□□□□□ -0.91
APOC1-202ENST00000588750 TCEAL9Q9UHQ7 104 aa9.35□□□□□ -0.91
APOC1-202ENST00000588750 GH1P01241 217 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 HSP90AA1P07900 732 aaKnown RBP9.34□□□□□ -0.91
APOC1-202ENST00000588750 PDCP20941 246 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 CST5P28325 142 aaPredicted RBP9.34□□□□□ -0.91
APOC1-202ENST00000588750 ICAM3P32942 547 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 KRT2P35908 639 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 SREBF1P36956 1147 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 ADCYAP1R1P41586 468 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 CLK2P49760 499 aaKnown RBP9.34□□□□□ -0.91
APOC1-202ENST00000588750 USP11P51784 963 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 GJA9P57773 515 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 MTMR1Q13613 665 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 LAMC2Q13753 1193 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 UBE2SQ16763 222 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 GNASQ5JWF2 1037 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 JAKMIP3Q5VZ66 844 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 TAPT1Q6NXT6 567 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 NIPA1Q7RTP0 329 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 TLK2Q86UE8 772 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 TRPV1Q8NER1 839 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 SNX21Q969T3 373 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 TMX3Q96JJ7 454 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 PURBQ96QR8 312 aaKnown RBP9.34□□□□□ -0.91
APOC1-202ENST00000588750 SENP7Q9BQF6 1050 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 PHF20Q9BVI0 1012 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 KATNBL1Q9H079 304 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 UPF3AQ9H1J1 476 aaKnown RBP9.34□□□□□ -0.91
APOC1-202ENST00000588750 C11orf49Q9H6J7 331 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 MLXIPQ9HAP2 919 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 POLR3EQ9NVU0 708 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 SMC3Q9UQE7 1217 aa9.34□□□□□ -0.91
APOC1-202ENST00000588750 ASTN1O14525 1302 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 SYNRGQ9UMZ2 1314 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 LCTP09848 1927 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 POTEFA5A3E0 1075 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 NOP56O00567 594 aaKnown RBP9.33□□□□□ -0.92
APOC1-202ENST00000588750 CAPN15O75808 1086 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 LARGE1O95461 756 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 CTDNEP1O95476 244 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 MYCNP04198 464 aaPredicted RBP9.33□□□□□ -0.92
APOC1-202ENST00000588750 CYP3A4P08684 503 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 EN2P19622 333 aaPredicted RBP9.33□□□□□ -0.92
APOC1-202ENST00000588750 RGS19P49795 217 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 NKX3-2P78367 333 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 ARHGAP4P98171 946 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 NONOQ15233 471 aaKnown RBP eCLIP9.33□□□□□ -0.92
APOC1-202ENST00000588750 LRRC41Q15345 812 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 FSCN1Q16658 493 aaKnown RBP9.33□□□□□ -0.92
APOC1-202ENST00000588750 CEP55Q53EZ4 464 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 TYW1BQ6NUM6 668 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 DHX37Q8IY37 1157 aaKnown RBP9.33□□□□□ -0.92
APOC1-202ENST00000588750 OR6J1Q8NGC5 347 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 TNPO1Q92973 898 aaKnown RBP9.33□□□□□ -0.92
APOC1-202ENST00000588750 EMID1Q96A84 441 aaPredicted RBP9.33□□□□□ -0.92
APOC1-202ENST00000588750 GLT1D1Q96MS3 346 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 INPP4AQ96PE3 977 aaPredicted RBP9.33□□□□□ -0.92
APOC1-202ENST00000588750 MXRA8Q9BRK3 442 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 SDF4Q9BRK5 362 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 KATNAL1Q9BW62 490 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 JADE2Q9NQC1 790 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 GNEQ9Y223 722 aaKnown RBP9.33□□□□□ -0.92
APOC1-202ENST00000588750 LRRC37A2A6NM11 1700 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 KIAA1217Q5T5P2 1943 aa9.33□□□□□ -0.92
APOC1-202ENST00000588750 MROH7Q68CQ1 1323 aa9.32□□□□□ -0.92
APOC1-202ENST00000588750 MCM3APO60318 1980 aa9.32□□□□□ -0.92
APOC1-202ENST00000588750 K7ELQ4 463 aaPredicted RBP9.32□□□□□ -0.92
APOC1-202ENST00000588750 DYNC1LI2O43237 492 aaPredicted RBP9.32□□□□□ -0.92
APOC1-202ENST00000588750 PGK1P00558 417 aa9.32□□□□□ -0.92
APOC1-202ENST00000588750 MMP1P03956 469 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms