RNA–Protein interactions for RNA: ENST00000588703.5

HDAC5-209, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 445 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-209ENST00000588703 CALM3P0DP25 149 aa20.85■□□□□ 0.93
HDAC5-209ENST00000588703 BRDTQ58F21 947 aaPredicted RBP20.85■□□□□ 0.93
HDAC5-209ENST00000588703 VSIG10LQ86VR7 867 aa20.85■□□□□ 0.93
HDAC5-209ENST00000588703 FCHSD1Q86WN1 690 aa20.85■□□□□ 0.93
HDAC5-209ENST00000588703 AFG1LQ8WV93 481 aa20.85■□□□□ 0.93
HDAC5-209ENST00000588703 FRMPD4Q14CM0 1322 aa20.84■□□□□ 0.93
HDAC5-209ENST00000588703 UMODL1Q5DID0 1318 aa20.84■□□□□ 0.93
HDAC5-209ENST00000588703 MMP3P08254 477 aa20.84■□□□□ 0.93
HDAC5-209ENST00000588703 MYCLP12524 364 aaPredicted RBP20.84■□□□□ 0.93
HDAC5-209ENST00000588703 CYP2C18P33260 490 aa20.84■□□□□ 0.93
HDAC5-209ENST00000588703 NBPF20Q3BBV1 942 aa20.84■□□□□ 0.93
HDAC5-209ENST00000588703 TMTC3Q6ZXV5 915 aa20.84■□□□□ 0.93
HDAC5-209ENST00000588703 DHX32Q7L7V1 743 aaKnown RBP20.84■□□□□ 0.93
HDAC5-209ENST00000588703 MICU3Q86XE3 530 aa20.84■□□□□ 0.93
HDAC5-209ENST00000588703 DEFB123Q8N688 67 aa20.84■□□□□ 0.93
HDAC5-209ENST00000588703 FANCBQ8NB91 859 aa20.84■□□□□ 0.93
HDAC5-209ENST00000588703 PPP1R13LQ8WUF5 828 aa20.84■□□□□ 0.93
HDAC5-209ENST00000588703 KCNB2Q92953 911 aa20.84■□□□□ 0.93
HDAC5-209ENST00000588703 NOC4LQ9BVI4 516 aaKnown RBP20.84■□□□□ 0.93
HDAC5-209ENST00000588703 HIPK3Q9H422 1215 aa20.84■□□□□ 0.93
HDAC5-209ENST00000588703 MRVI1Q9Y6F6 885 aa20.84■□□□□ 0.93
HDAC5-209ENST00000588703 SCN5AQ14524 2016 aa20.83■□□□□ 0.93
HDAC5-209ENST00000588703 KPNA6O60684 536 aa20.83■□□□□ 0.93
HDAC5-209ENST00000588703 CSF2RAP15509 400 aa20.83■□□□□ 0.93
HDAC5-209ENST00000588703 APOA5Q6Q788 366 aa20.83■□□□□ 0.93
HDAC5-209ENST00000588703 C16orf59Q7L2K0 433 aa20.83■□□□□ 0.93
HDAC5-209ENST00000588703 EMID1Q96A84 441 aaPredicted RBP20.83■□□□□ 0.93
HDAC5-209ENST00000588703 ZFP91Q96JP5 570 aaPredicted RBP20.83■□□□□ 0.93
HDAC5-209ENST00000588703 RNPC3Q96LT9 517 aaKnown RBP20.83■□□□□ 0.93
HDAC5-209ENST00000588703 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.83■□□□□ 0.931e-7■■□□□ 13.8
HDAC5-209ENST00000588703 TRMT13Q9NUP7 481 aaKnown RBP20.83■□□□□ 0.93
HDAC5-209ENST00000588703 SEC63Q9UGP8 760 aaKnown RBP20.83■□□□□ 0.93
HDAC5-209ENST00000588703 TANC1Q9C0D5 1861 aa20.82■□□□□ 0.92
HDAC5-209ENST00000588703 hCG_1642624A0A1W2PR95 340 aa20.82■□□□□ 0.92
HDAC5-209ENST00000588703 NEFLP07196 543 aa20.82■□□□□ 0.92
HDAC5-209ENST00000588703 CCND2P30279 289 aa20.82■□□□□ 0.92
HDAC5-209ENST00000588703 PPIGQ13427 754 aaKnown RBP eCLIP20.82■□□□□ 0.923e-6■■■□□ 16
HDAC5-209ENST00000588703 KRT32Q14532 448 aa20.82■□□□□ 0.92
HDAC5-209ENST00000588703 TMEM199Q8N511 208 aa20.82■□□□□ 0.92
HDAC5-209ENST00000588703 GPKOWQ92917 476 aaPredicted RBP eCLIP20.82■□□□□ 0.92
HDAC5-209ENST00000588703 BRPF3Q9ULD4 1205 aa20.82■□□□□ 0.92
HDAC5-209ENST00000588703 TRIP12Q14669 1992 aaPredicted RBP20.82■□□□□ 0.92
HDAC5-209ENST00000588703 MEIS2O14770 477 aa20.81■□□□□ 0.92
HDAC5-209ENST00000588703 TMEM240Q5SV17 173 aa20.81■□□□□ 0.92
HDAC5-209ENST00000588703 NFRKBQ6P4R8 1299 aa20.81■□□□□ 0.92
HDAC5-209ENST00000588703 USP17L6PQ6QN14 398 aa20.81■□□□□ 0.92
HDAC5-209ENST00000588703 CCDC82Q8N4S0 544 aa20.81■□□□□ 0.92
HDAC5-209ENST00000588703 KAT2BQ92831 832 aa20.81■□□□□ 0.92
HDAC5-209ENST00000588703 WNT8AQ9H1J5 351 aa20.81■□□□□ 0.92
HDAC5-209ENST00000588703 MTMR10Q9NXD2 777 aa20.81■□□□□ 0.92
HDAC5-209ENST00000588703 CNTNAP5Q8WYK1 1306 aa20.8■□□□□ 0.92
HDAC5-209ENST00000588703 PIK3CDO00329 1044 aa20.8■□□□□ 0.92
HDAC5-209ENST00000588703 CYP2C9P11712 490 aa20.8■□□□□ 0.92
HDAC5-209ENST00000588703 CPA1P15085 419 aa20.8■□□□□ 0.92
HDAC5-209ENST00000588703 HSPA4P34932 840 aa20.8■□□□□ 0.92
HDAC5-209ENST00000588703 MRPS9P82933 396 aaKnown RBP20.8■□□□□ 0.92
HDAC5-209ENST00000588703 SP2Q02086 613 aa20.8■□□□□ 0.92
HDAC5-209ENST00000588703 FAM47CQ5HY64 1035 aa20.8■□□□□ 0.92
HDAC5-209ENST00000588703 FAM109BQ6ICB4 259 aaPredicted RBP20.8■□□□□ 0.92
HDAC5-209ENST00000588703 ACRP10323 421 aa20.79■□□□□ 0.92
HDAC5-209ENST00000588703 UBA1P22314 1058 aaKnown RBP20.79■□□□□ 0.92
HDAC5-209ENST00000588703 CCL23P55773 120 aa20.79■□□□□ 0.92
HDAC5-209ENST00000588703 SMAD3P84022 425 aaKnown RBP20.79■□□□□ 0.92
HDAC5-209ENST00000588703 LAMC2Q13753 1193 aa20.79■□□□□ 0.92
HDAC5-209ENST00000588703 KCNV1Q6PIU1 500 aa20.79■□□□□ 0.92
HDAC5-209ENST00000588703 DHX37Q8IY37 1157 aaKnown RBP20.79■□□□□ 0.92
HDAC5-209ENST00000588703 PPTC7Q8NI37 304 aa20.79■□□□□ 0.92
HDAC5-209ENST00000588703 SNX14Q9Y5W7 946 aa20.79■□□□□ 0.92
HDAC5-209ENST00000588703 CDH23Q9H251 3354 aa20.79■□□□□ 0.92
HDAC5-209ENST00000588703 GBF1Q92538 1859 aa20.79■□□□□ 0.92
HDAC5-209ENST00000588703 CHD9Q3L8U1 2897 aa20.79■□□□□ 0.92
HDAC5-209ENST00000588703 ZBTB43O43298 467 aa20.78■□□□□ 0.92
HDAC5-209ENST00000588703 SORBS3O60504 671 aa20.78■□□□□ 0.92
HDAC5-209ENST00000588703 SUPT20HL2P0C7V6 817 aa20.78■□□□□ 0.92
HDAC5-209ENST00000588703 HOXD8P13378 290 aaPredicted RBP20.78■□□□□ 0.92
HDAC5-209ENST00000588703 PTPN11Q06124 597 aaPredicted RBP20.78■□□□□ 0.92
HDAC5-209ENST00000588703 FUT2Q10981 343 aa20.78■□□□□ 0.92
HDAC5-209ENST00000588703 SEMA3FQ13275 785 aa20.78■□□□□ 0.92
HDAC5-209ENST00000588703 DGKDQ16760 1214 aa20.78■□□□□ 0.92
HDAC5-209ENST00000588703 CELF3Q5SZQ8 465 aaKnown RBP20.78■□□□□ 0.92
HDAC5-209ENST00000588703 RASIP1Q5U651 963 aa20.78■□□□□ 0.92
HDAC5-209ENST00000588703 MYSM1Q5VVJ2 828 aa20.78■□□□□ 0.92
HDAC5-209ENST00000588703 SYNE3Q6ZMZ3 975 aa20.78■□□□□ 0.92
HDAC5-209ENST00000588703 SMARCC2Q8TAQ2 1214 aa20.78■□□□□ 0.92
HDAC5-209ENST00000588703 VWCEQ96DN2 955 aa20.78■□□□□ 0.92
HDAC5-209ENST00000588703 INPP4AQ96PE3 977 aaPredicted RBP20.78■□□□□ 0.92
HDAC5-209ENST00000588703 IL23AQ9NPF7 189 aa20.78■□□□□ 0.92
HDAC5-209ENST00000588703 TET1Q8NFU7 2136 aa20.77■□□□□ 0.92
HDAC5-209ENST00000588703 KLF18A0A0U1RQI7 1052 aa20.77■□□□□ 0.92
HDAC5-209ENST00000588703 GGPS1O95749 300 aa20.77■□□□□ 0.92
HDAC5-209ENST00000588703 HMGB1P09429 215 aaKnown RBP20.77■□□□□ 0.92
HDAC5-209ENST00000588703 TGFB3P10600 412 aa20.77■□□□□ 0.92
HDAC5-209ENST00000588703 CASTP20810 708 aaKnown RBP20.77■□□□□ 0.92
HDAC5-209ENST00000588703 CHMP4BP1P59074 171 aa20.77■□□□□ 0.92
HDAC5-209ENST00000588703 RTN1Q16799 776 aa20.77■□□□□ 0.92
HDAC5-209ENST00000588703 ZNF365Q70YC5 407 aa20.77■□□□□ 0.92
HDAC5-209ENST00000588703 CUL5Q93034 780 aa20.77■□□□□ 0.92
HDAC5-209ENST00000588703 JAKMIP1Q96N16 626 aaKnown RBP20.77■□□□□ 0.92
HDAC5-209ENST00000588703 CTAGE1Q96RT6 745 aa20.77■□□□□ 0.92
HDAC5-209ENST00000588703 BCAS3Q9H6U6 928 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms