RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 ZDHHC3Q9NYG2 299 aa6.77□□□□□ -1.33
CHUK-203ENST00000588656 PRKAG2Q9UGJ0 569 aa6.77□□□□□ -1.33
CHUK-203ENST00000588656 HDAC5Q9UQL6 1122 aa6.77□□□□□ -1.33
CHUK-203ENST00000588656 RABGAP1Q9Y3P9 1069 aa6.77□□□□□ -1.33
CHUK-203ENST00000588656 IVNS1ABPQ9Y6Y0 642 aa6.77□□□□□ -1.33
CHUK-203ENST00000588656 LCTP09848 1927 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 GREB1LQ9C091 1923 aaPredicted RBP6.76□□□□□ -1.33
CHUK-203ENST00000588656 SLC15A5A6NIM6 579 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 A6NJY4 79 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 PRKAB2O43741 272 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 LZTS3O60299 673 aaPredicted RBP6.76□□□□□ -1.33
CHUK-203ENST00000588656 PQBP1O60828 265 aaKnown RBP6.76□□□□□ -1.33
CHUK-203ENST00000588656 PGK1P00558 417 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 POLR3DP05423 398 aaPredicted RBP6.76□□□□□ -1.33
CHUK-203ENST00000588656 PGK2P07205 417 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 MAPTP10636 758 aaKnown RBP6.76□□□□□ -1.33
CHUK-203ENST00000588656 RLBP1P12271 317 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 TAL1P17542 331 aaPredicted RBP6.76□□□□□ -1.33
CHUK-203ENST00000588656 ERCC3P19447 782 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 ADH6P28332 368 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 EPHB4P54760 987 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 CCNA1P78396 465 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 TNP2Q05952 138 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 SLC39A5Q6ZMH5 540 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 AACSQ86V21 672 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 ITPRIPQ8IWB1 547 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 LCORLQ8N3X6 602 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 USP38Q8NB14 1042 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 LPAR1Q92633 364 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 CHMP4CQ96CF2 233 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 DNAJC2Q99543 621 aaKnown RBP6.76□□□□□ -1.33
CHUK-203ENST00000588656 PDLIM7Q9NR12 457 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 SERTAD1Q9UHV2 236 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 SERPINB13Q9UIV8 391 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 LRRC37A2A6NM11 1700 aa6.76□□□□□ -1.33
CHUK-203ENST00000588656 TMEM229AB2RXF0 380 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 KBTBD13C9JR72 458 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 DNM1LO00429 736 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 BACH1O14867 736 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 FLOT1O75955 427 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 GLRX3O76003 335 aaKnown RBP6.75□□□□□ -1.33
CHUK-203ENST00000588656 AKR1B1P15121 316 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 FOSL2P15408 326 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 ATP8B2P98198 1209 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 FAM109BQ6ICB4 259 aaPredicted RBP6.75□□□□□ -1.33
CHUK-203ENST00000588656 TATDN1Q6P1N9 297 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 METTL16Q86W50 562 aaKnown RBP6.75□□□□□ -1.33
CHUK-203ENST00000588656 C12orf42Q96LP6 360 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 RNPC3Q96LT9 517 aaKnown RBP6.75□□□□□ -1.33
CHUK-203ENST00000588656 SPATC1LQ9H0A9 340 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 KIAA1683Q9H0B3 1180 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 SEMA6BQ9H3T3 888 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 SUV39H2Q9H5I1 410 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 ARMT1Q9H993 441 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 CABP5Q9NP86 173 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 FBXO28Q9NVF7 368 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 MCM9Q9NXL9 1143 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 TRIP12Q14669 1992 aaPredicted RBP6.75□□□□□ -1.33
CHUK-203ENST00000588656 ZNF532Q9HCE3 1301 aa6.75□□□□□ -1.33
CHUK-203ENST00000588656 GRXCR1A8MXD5 290 aa6.74□□□□□ -1.33
CHUK-203ENST00000588656 GOLIM4O00461 696 aa6.74□□□□□ -1.33
CHUK-203ENST00000588656 KHNYNO15037 678 aaKnown RBP6.74□□□□□ -1.33
CHUK-203ENST00000588656 MAP4K4O95819 1239 aaPredicted RBP6.74□□□□□ -1.33
CHUK-203ENST00000588656 PTGS1P23219 599 aa6.74□□□□□ -1.33
CHUK-203ENST00000588656 DGKGP49619 791 aa6.74□□□□□ -1.33
CHUK-203ENST00000588656 USP14P54578 494 aa6.74□□□□□ -1.33
CHUK-203ENST00000588656 TLE2Q04725 743 aa6.74□□□□□ -1.33
CHUK-203ENST00000588656 LRRC41Q15345 812 aa6.74□□□□□ -1.33
CHUK-203ENST00000588656 ZKSCAN2Q63HK3 967 aa6.74□□□□□ -1.33
CHUK-203ENST00000588656 LBX2Q6XYB7 198 aa6.74□□□□□ -1.33
CHUK-203ENST00000588656 FTSJ3Q8IY81 847 aaKnown RBP6.74□□□□□ -1.33
CHUK-203ENST00000588656 ZNF295-AS1Q8N0V1 137 aa6.74□□□□□ -1.33
CHUK-203ENST00000588656 SSH3Q8TE77 659 aa6.74□□□□□ -1.33
CHUK-203ENST00000588656 GTF3C2Q8WUA4 911 aaPredicted RBP6.74□□□□□ -1.33
CHUK-203ENST00000588656 UBE2Q2Q8WVN8 375 aa6.74□□□□□ -1.33
CHUK-203ENST00000588656 ARHGAP45Q92619 1136 aa6.74□□□□□ -1.33
CHUK-203ENST00000588656 NUP88Q99567 741 aaPredicted RBP6.74□□□□□ -1.33
CHUK-203ENST00000588656 RIOK1Q9BRS2 568 aaKnown RBP6.74□□□□□ -1.33
CHUK-203ENST00000588656 PRR12Q9ULL5 1215 aa6.74□□□□□ -1.33
CHUK-203ENST00000588656 PCDHGA11Q9Y5H2 935 aa6.74□□□□□ -1.33
CHUK-203ENST00000588656 DDX49Q9Y6V7 483 aaKnown RBP6.74□□□□□ -1.33
CHUK-203ENST00000588656 TTC28Q96AY4 2481 aa6.74□□□□□ -1.33
CHUK-203ENST00000588656 PTPRSQ13332 1948 aa6.74□□□□□ -1.33
CHUK-203ENST00000588656 MYADML2A6NDP7 307 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 IPO8O15397 1037 aaKnown RBP6.73□□□□□ -1.33
CHUK-203ENST00000588656 SEPT4O43236 478 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 CT47B1P0C2W7 299 aaPredicted RBP6.73□□□□□ -1.33
CHUK-203ENST00000588656 FAM157BP0CG42 384 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 PDE6AP16499 860 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 ICA1Q05084 483 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 MAP3K12Q12852 859 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 LAMC2Q13753 1193 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 COG2Q14746 738 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 TMEM132BQ14DG7 1078 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 EML3Q32P44 896 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 SLC9C2Q5TAH2 1124 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 SAMD5Q5TGI4 173 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 CEP85Q6P2H3 762 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 CHSY3Q70JA7 882 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 TTC6Q86TZ1 520 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms