RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 WNK4Q96J92 1243 aa11.86□□□□□ -0.51
CHMP1B-202ENST00000588284 P2RX7Q99572 595 aaKnown RBP11.86□□□□□ -0.51
CHMP1B-202ENST00000588284 PANK2Q9BZ23 570 aa11.86□□□□□ -0.51
CHMP1B-202ENST00000588284 ACAD9Q9H845 621 aa11.86□□□□□ -0.51
CHMP1B-202ENST00000588284 LRWD1Q9UFC0 647 aa11.86□□□□□ -0.51
CHMP1B-202ENST00000588284 ZNF214Q9UL59 606 aaPredicted RBP11.86□□□□□ -0.51
CHMP1B-202ENST00000588284 SLC45A1Q9Y2W3 748 aa11.86□□□□□ -0.51
CHMP1B-202ENST00000588284 NFIBO00712 420 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 SLC25A27O95847 323 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 ITGBL1O95965 494 aaPredicted RBP11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 ZBTB48P10074 688 aaPredicted RBP11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 TIE1P35590 1138 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 PLS1Q14651 629 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 MUM1L1Q5H9M0 696 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 TREML2Q5T2D2 321 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 RRAGBQ5VZM2 374 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 NSMFQ6X4W1 530 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 USP49Q70CQ1 688 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 NIPA1Q7RTP0 329 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 GAS2L3Q86XJ1 694 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 RIOX2Q8IUF8 465 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 CKAP2LQ8IYA6 745 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 HS6ST3Q8IZP7 471 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 IGSF22Q8N9C0 903 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 SYTL5Q8TDW5 730 aaPredicted RBP11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 ZNF526Q8TF50 670 aaPredicted RBP11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 CALML4Q96GE6 196 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 ASCC2Q9H1I8 757 aaPredicted RBP11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 CUEDC2Q9H467 287 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 TTC12Q9H892 705 aaPredicted RBP11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 KIAA1468Q9P260 1216 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 SERTAD1Q9UHV2 236 aa11.85□□□□□ -0.51
CHMP1B-202ENST00000588284 PAPPA2Q9BXP8 1791 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 SLC37A4O43826 429 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 SMC2O95347 1197 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 HERVK_113P62684 666 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 RPS6P62753 249 aaKnown RBP11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 UVSSAQ2YD98 709 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 CEP55Q53EZ4 464 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 PRR16Q569H4 304 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 KRT79Q5XKE5 535 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 GPAT2Q6NUI2 795 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 CABP7Q86V35 215 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 PDILTQ8N807 584 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 RASSF8Q8NHQ8 419 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 DHX58Q96C10 678 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 FUCA2Q9BTY2 467 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 MAGEF1Q9HAY2 307 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 KCNMB3Q9NPA1 279 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 HOMER2Q9NSB8 354 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 ANO10Q9NW15 660 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 TRPC6Q9Y210 931 aa11.84□□□□□ -0.51
CHMP1B-202ENST00000588284 B4DLN1 442 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 MEIS1O00470 390 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 BCRP11274 1271 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 TAL1P17542 331 aaPredicted RBP11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 GJA5P36382 358 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 SETQ01105 290 aaPredicted RBP11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 TYRO3Q06418 890 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 FMR1Q06787 632 aaKnown RBP eCLIP11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 SEMA3FQ13275 785 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 MOGSQ13724 837 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 BAATQ14032 418 aaPredicted RBP11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 ARHGEF16Q5VV41 709 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 SPRYD7Q5W111 196 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 PCNX4Q63HM2 1172 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 ANKRD23Q86SG2 305 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 PLA2G4DQ86XP0 818 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 KCTD17Q8N5Z5 321 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 ERMNQ8TAM6 284 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 NSUN6Q8TEA1 469 aaKnown RBP11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 HAS1Q92839 578 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 CDK5RAP3Q96JB5 506 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 TAAR1Q96RJ0 339 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 RMDN3Q96TC7 470 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 MXRA8Q9BRK3 442 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 LRRC27Q9C0I9 530 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 NAT10Q9H0A0 1025 aaKnown RBP11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 SPATC1LQ9H0A9 340 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 GRPEL1Q9HAV7 217 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 RIPK3Q9Y572 518 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 RPTORQ8N122 1335 aa11.83□□□□□ -0.52
CHMP1B-202ENST00000588284 CCL15-CCL14A0A0B4J2E2 113 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 FAM86B1E9PN63 330 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 MAFGO15525 162 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 ACTN4O43707 911 aaKnown RBP11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 STAM2O75886 525 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 MYL1P05976 194 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 FAM86B2P0C5J1 330 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 STAT6P42226 847 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 GCLCP48506 637 aaPredicted RBP11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 HUNKP57058 714 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 MDM2Q00987 491 aaPredicted RBP11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 AMPD3Q01432 767 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 POSTNQ15063 836 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 STX1AQ16623 288 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 CCL15Q16663 113 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 CST9Q5W186 159 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 SH3RF1Q7Z6J0 888 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms