RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 INTS13Q9NVM9 706 aa16.5■□□□□ 0.23
CCDC43-203ENST00000588210 BTBD7Q9P203 1132 aa16.5■□□□□ 0.23
CCDC43-203ENST00000588210 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.5■□□□□ 0.23
CCDC43-203ENST00000588210 V9GYY5 206 aaPredicted RBP16.5■□□□□ 0.23
CCDC43-203ENST00000588210 GNRH1P01148 92 aa16.49■□□□□ 0.23
CCDC43-203ENST00000588210 SARSP49591 514 aaKnown RBP16.49■□□□□ 0.23
CCDC43-203ENST00000588210 CCNA1P78396 465 aa16.49■□□□□ 0.23
CCDC43-203ENST00000588210 ZNF543Q08ER8 600 aa16.49■□□□□ 0.23
CCDC43-203ENST00000588210 IKQ13123 557 aaPredicted RBP16.49■□□□□ 0.23
CCDC43-203ENST00000588210 Q3C1V9 767 aa16.49■□□□□ 0.23
CCDC43-203ENST00000588210 FBXO38Q6PIJ6 1188 aa16.49■□□□□ 0.23
CCDC43-203ENST00000588210 ZNF654Q8IZM8 581 aa16.49■□□□□ 0.23
CCDC43-203ENST00000588210 MLKLQ8NB16 471 aa16.49■□□□□ 0.23
CCDC43-203ENST00000588210 KIFC2Q96AC6 838 aa16.49■□□□□ 0.23
CCDC43-203ENST00000588210 CEP131Q9UPN4 1083 aa16.49■□□□□ 0.23
CCDC43-203ENST00000588210 A0A0G2JMZ2 1700 aa16.49■□□□□ 0.23
CCDC43-203ENST00000588210 PSMC4P43686 418 aa16.49■□□□□ 0.23
CCDC43-203ENST00000588210 FCGRTP55899 365 aa16.49■□□□□ 0.23
CCDC43-203ENST00000588210 GRIN1Q05586 938 aa16.49■□□□□ 0.23
CCDC43-203ENST00000588210 TBX2Q13207 712 aaPredicted RBP16.49■□□□□ 0.23
CCDC43-203ENST00000588210 MORC3Q14149 939 aa16.49■□□□□ 0.23
CCDC43-203ENST00000588210 BTNL9Q6UXG8 535 aa16.49■□□□□ 0.23
CCDC43-203ENST00000588210 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.49■□□□□ 0.231e-7■■□□□ 12.3
CCDC43-203ENST00000588210 SRPRBQ9Y5M8 271 aaKnown RBP16.49■□□□□ 0.23
CCDC43-203ENST00000588210 PEX10O60683 326 aa16.48■□□□□ 0.23
CCDC43-203ENST00000588210 ZNF18P17022 549 aa16.48■□□□□ 0.23
CCDC43-203ENST00000588210 PPP2R5BQ15173 497 aa16.48■□□□□ 0.23
CCDC43-203ENST00000588210 ASPRV1Q53RT3 343 aa16.48■□□□□ 0.23
CCDC43-203ENST00000588210 KANK3Q6NY19 840 aa16.48■□□□□ 0.23
CCDC43-203ENST00000588210 CTU1Q7Z7A3 348 aaKnown RBP16.48■□□□□ 0.23
CCDC43-203ENST00000588210 CATIPQ7Z7H3 387 aa16.48■□□□□ 0.23
CCDC43-203ENST00000588210 TMEM139Q8IV31 216 aa16.48■□□□□ 0.23
CCDC43-203ENST00000588210 FANCBQ8NB91 859 aa16.48■□□□□ 0.23
CCDC43-203ENST00000588210 ENOX1Q8TC92 643 aaKnown RBP16.48■□□□□ 0.23
CCDC43-203ENST00000588210 RNF26Q9BY78 433 aaPredicted RBP16.48■□□□□ 0.23
CCDC43-203ENST00000588210 ARHGAP39Q9C0H5 1083 aa16.48■□□□□ 0.23
CCDC43-203ENST00000588210 EFCC1Q9HA90 598 aa16.48■□□□□ 0.23
CCDC43-203ENST00000588210 FAM53CQ9NYF3 392 aa16.48■□□□□ 0.23
CCDC43-203ENST00000588210 FRMPD2Q68DX3 1309 aaPredicted RBP16.48■□□□□ 0.23
CCDC43-203ENST00000588210 POLR2DO15514 142 aaKnown RBP16.47■□□□□ 0.23
CCDC43-203ENST00000588210 ARHGAP6O43182 974 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 ZBED4O75132 1171 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 PARP1P09874 1014 aaKnown RBP16.47■□□□□ 0.23
CCDC43-203ENST00000588210 PRR29P0C7W0 189 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 GABPB1Q06547 395 aaPredicted RBP16.47■□□□□ 0.23
CCDC43-203ENST00000588210 TMEM132BQ14DG7 1078 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 SPECC1Q5M775 1068 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 TRIM65Q6PJ69 517 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 HOMER1Q86YM7 354 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 SMARCE1Q969G3 411 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 SPATC1LQ9H0A9 340 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 SLC38A10Q9HBR0 1119 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 GPCPD1Q9NPB8 672 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 SERTAD1Q9UHV2 236 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 TRIM17Q9Y577 477 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 CTDP1Q9Y5B0 961 aaPredicted RBP16.47■□□□□ 0.23
CCDC43-203ENST00000588210 PCDHB6Q9Y5E3 794 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 ZSCAN12O43309 604 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 ACTN4O43707 911 aaKnown RBP16.47■□□□□ 0.23
CCDC43-203ENST00000588210 H2AFXP16104 143 aaPredicted RBP16.47■□□□□ 0.23
CCDC43-203ENST00000588210 HOXD10P28358 340 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 CTGFP29279 349 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 MAPK4P31152 587 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 CAP1Q01518 475 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 TROAPQ12815 778 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 NR5A1Q13285 461 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 TTBK2Q6IQ55 1244 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 REXO1L1PQ8IX06 675 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 REPS2Q8NFH8 660 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 TRIM47Q96LD4 638 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 PRR12Q9ULL5 1215 aa16.47■□□□□ 0.23
CCDC43-203ENST00000588210 TNPO2O14787 897 aaKnown RBP16.46■□□□□ 0.23
CCDC43-203ENST00000588210 DDAH1O94760 285 aa16.46■□□□□ 0.23
CCDC43-203ENST00000588210 GOLGA8HP0CJ92 632 aa16.46■□□□□ 0.23
CCDC43-203ENST00000588210 OAZ1P54368 228 aa16.46■□□□□ 0.23
CCDC43-203ENST00000588210 PKN2Q16513 984 aaKnown RBP16.46■□□□□ 0.23
CCDC43-203ENST00000588210 OTOP1Q7RTM1 612 aa16.46■□□□□ 0.23
CCDC43-203ENST00000588210 SPATA20Q8TB22 786 aa16.46■□□□□ 0.23
CCDC43-203ENST00000588210 ZNF214Q9UL59 606 aaPredicted RBP16.46■□□□□ 0.23
CCDC43-203ENST00000588210 ATP2A1O14983 1001 aa16.46■□□□□ 0.22
CCDC43-203ENST00000588210 SLC16A2P36021 539 aa16.46■□□□□ 0.22
CCDC43-203ENST00000588210 PLS1Q14651 629 aa16.46■□□□□ 0.22
CCDC43-203ENST00000588210 SYDE2Q5VT97 1194 aa16.46■□□□□ 0.22
CCDC43-203ENST00000588210 KRT222Q8N1A0 295 aa16.46■□□□□ 0.22
CCDC43-203ENST00000588210 SHCBP1Q8NEM2 672 aa16.46■□□□□ 0.22
CCDC43-203ENST00000588210 COA7Q96BR5 231 aa16.46■□□□□ 0.22
CCDC43-203ENST00000588210 SRRTQ9BXP5 876 aaKnown RBP16.46■□□□□ 0.22
CCDC43-203ENST00000588210 MOV10L1Q9BXT6 1211 aaKnown RBP16.46■□□□□ 0.22
CCDC43-203ENST00000588210 PORCNQ9H237 461 aa16.46■□□□□ 0.22
CCDC43-203ENST00000588210 DNAI1Q9UI46 699 aa16.46■□□□□ 0.22
CCDC43-203ENST00000588210 NFE2L3Q9Y4A8 694 aa16.46■□□□□ 0.22
CCDC43-203ENST00000588210 MGAMO43451 1857 aa16.45■□□□□ 0.22
CCDC43-203ENST00000588210 GOLGA6L9A6NEM1 432 aa16.45■□□□□ 0.22
CCDC43-203ENST00000588210 ECM2O94769 699 aaPredicted RBP16.45■□□□□ 0.22
CCDC43-203ENST00000588210 SLC25A27O95847 323 aa16.45■□□□□ 0.22
CCDC43-203ENST00000588210 CALM1P0DP23 149 aa16.45■□□□□ 0.22
CCDC43-203ENST00000588210 CALM2P0DP24 149 aa16.45■□□□□ 0.22
CCDC43-203ENST00000588210 CALM3P0DP25 149 aa16.45■□□□□ 0.22
CCDC43-203ENST00000588210 STAT3P40763 770 aa16.45■□□□□ 0.22
CCDC43-203ENST00000588210 PRMT2P55345 433 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms