RNA–Protein interactions for RNA: ENST00000588087.5

TMC6-209, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 2,384 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-209ENST00000588087 PDE2AO00408 941 aaPredicted RBP23.94■■□□□ 1.42
TMC6-209ENST00000588087 PPEF1O14829 653 aaPredicted RBP23.94■■□□□ 1.42
TMC6-209ENST00000588087 ZMYND10O75800 440 aa23.94■■□□□ 1.42
TMC6-209ENST00000588087 TMEM119Q4V9L6 283 aa23.94■■□□□ 1.42
TMC6-209ENST00000588087 GUF1Q8N442 669 aaKnown RBP23.94■■□□□ 1.42
TMC6-209ENST00000588087 EHBP1Q8NDI1 1231 aa23.94■■□□□ 1.42
TMC6-209ENST00000588087 CAGE1Q8TC20 777 aa23.94■■□□□ 1.42
TMC6-209ENST00000588087 HAS1Q92839 578 aa23.94■■□□□ 1.42
TMC6-209ENST00000588087 RAB34Q9BZG1 259 aa23.94■■□□□ 1.42
TMC6-209ENST00000588087 MLXIPQ9HAP2 919 aa23.94■■□□□ 1.42
TMC6-209ENST00000588087 SHMT1P34896 483 aa23.93■■□□□ 1.42
TMC6-209ENST00000588087 VAV2P52735 878 aa23.93■■□□□ 1.42
TMC6-209ENST00000588087 USP14P54578 494 aa23.93■■□□□ 1.42
TMC6-209ENST00000588087 KIF5AQ12840 1032 aa23.93■■□□□ 1.42
TMC6-209ENST00000588087 SHROOM1Q2M3G4 852 aaPredicted RBP23.93■■□□□ 1.42
TMC6-209ENST00000588087 FIGNQ5HY92 759 aa23.93■■□□□ 1.42
TMC6-209ENST00000588087 FGFBP2Q9BYJ0 223 aa23.93■■□□□ 1.42
TMC6-209ENST00000588087 TBC1D7Q9P0N9 293 aa23.93■■□□□ 1.42
TMC6-209ENST00000588087 VPS18Q9P253 973 aa23.93■■□□□ 1.42
TMC6-209ENST00000588087 MARCH6O60337 910 aa23.93■■□□□ 1.42
TMC6-209ENST00000588087 HOXA10P31260 410 aaPredicted RBP23.93■■□□□ 1.42
TMC6-209ENST00000588087 EIF4A3P38919 411 aaKnown RBP23.93■■□□□ 1.42
TMC6-209ENST00000588087 SPA17Q15506 151 aa23.93■■□□□ 1.42
TMC6-209ENST00000588087 MAN2A1Q16706 1144 aa23.93■■□□□ 1.42
TMC6-209ENST00000588087 ZNF662Q6ZS27 426 aa23.93■■□□□ 1.42
TMC6-209ENST00000588087 RRAGAQ7L523 313 aa23.93■■□□□ 1.42
TMC6-209ENST00000588087 SECISBP2LQ93073 1101 aaKnown RBP23.93■■□□□ 1.42
TMC6-209ENST00000588087 JADE2Q9NQC1 790 aa23.93■■□□□ 1.42
TMC6-209ENST00000588087 CAPN6Q9Y6Q1 641 aa23.93■■□□□ 1.42
TMC6-209ENST00000588087 LY75O60449 1722 aa23.93■■□□□ 1.42
TMC6-209ENST00000588087 LRRC53A6NM62 1247 aa23.92■■□□□ 1.42
TMC6-209ENST00000588087 LRRIQ3A6PVS8 624 aaPredicted RBP23.92■■□□□ 1.42
TMC6-209ENST00000588087 PURBQ96QR8 312 aaKnown RBP23.92■■□□□ 1.42
TMC6-209ENST00000588087 ADAM21Q9UKJ8 722 aa23.92■■□□□ 1.42
TMC6-209ENST00000588087 CACNB1Q02641 598 aaPredicted RBP23.92■■□□□ 1.42
TMC6-209ENST00000588087 PDIA5Q14554 519 aa23.92■■□□□ 1.42
TMC6-209ENST00000588087 IFIH1Q9BYX4 1025 aaKnown RBP23.92■■□□□ 1.42
TMC6-209ENST00000588087 TANGO6Q9C0B7 1094 aa23.92■■□□□ 1.42
TMC6-209ENST00000588087 FAM196BA6NMK8 535 aa23.91■■□□□ 1.42
TMC6-209ENST00000588087 POLRMTO00411 1230 aaKnown RBP23.91■■□□□ 1.42
TMC6-209ENST00000588087 KIF11P52732 1056 aa23.91■■□□□ 1.42
TMC6-209ENST00000588087 NFIAQ12857 509 aa23.91■■□□□ 1.42
TMC6-209ENST00000588087 GSPT2Q8IYD1 628 aaKnown RBP23.91■■□□□ 1.42
TMC6-209ENST00000588087 CUL5Q93034 780 aa23.91■■□□□ 1.42
TMC6-209ENST00000588087 GJD4Q96KN9 370 aaPredicted RBP23.91■■□□□ 1.42
TMC6-209ENST00000588087 HINFPQ9BQA5 517 aa23.91■■□□□ 1.42
TMC6-209ENST00000588087 PLAGL2Q9UPG8 496 aa23.91■■□□□ 1.42
TMC6-209ENST00000588087 CLK2P49760 499 aaKnown RBP23.91■■□□□ 1.42
TMC6-209ENST00000588087 CDK17Q00537 523 aa23.91■■□□□ 1.42
TMC6-209ENST00000588087 COASYQ13057 564 aa23.91■■□□□ 1.42
TMC6-209ENST00000588087 WDR93Q6P2C0 686 aa23.91■■□□□ 1.42
TMC6-209ENST00000588087 GDAP1L1Q96MZ0 367 aa23.91■■□□□ 1.42
TMC6-209ENST00000588087 CRAMP1Q96RY5 1269 aa23.91■■□□□ 1.42
TMC6-209ENST00000588087 GBP3Q9H0R5 595 aa23.91■■□□□ 1.42
TMC6-209ENST00000588087 DEF6Q9H4E7 631 aa23.91■■□□□ 1.42
TMC6-209ENST00000588087 PCDHA13Q9Y5I0 950 aa23.91■■□□□ 1.42
TMC6-209ENST00000588087 USP17L15C9J2P7 530 aa23.9■■□□□ 1.42
TMC6-209ENST00000588087 USP17L13C9JLJ4 530 aa23.9■■□□□ 1.42
TMC6-209ENST00000588087 USP17L11C9JVI0 530 aa23.9■■□□□ 1.42
TMC6-209ENST00000588087 USP17L18D6R9N7 530 aa23.9■■□□□ 1.42
TMC6-209ENST00000588087 USP17L22D6RA61 530 aa23.9■■□□□ 1.42
TMC6-209ENST00000588087 USP17L17D6RBQ6 530 aa23.9■■□□□ 1.42
TMC6-209ENST00000588087 USP17L19D6RCP7 530 aa23.9■■□□□ 1.42
TMC6-209ENST00000588087 USP17L20D6RJB6 530 aa23.9■■□□□ 1.42
TMC6-209ENST00000588087 PHACTR2O75167 634 aa23.9■■□□□ 1.42
TMC6-209ENST00000588087 MOCS3O95396 460 aa23.9■■□□□ 1.42
TMC6-209ENST00000588087 HNRNPH2P55795 449 aaKnown RBP23.9■■□□□ 1.42
TMC6-209ENST00000588087 EHHADHQ08426 723 aa23.9■■□□□ 1.42
TMC6-209ENST00000588087 C2orf54Q08AI8 447 aa23.9■■□□□ 1.42
TMC6-209ENST00000588087 RAD51AP2Q09MP3 1159 aa23.9■■□□□ 1.42
TMC6-209ENST00000588087 USP17L24Q0WX57 530 aa23.9■■□□□ 1.42
TMC6-209ENST00000588087 USP17L6PQ6QN14 398 aa23.9■■□□□ 1.42
TMC6-209ENST00000588087 ZFPM1Q8IX07 1006 aa23.9■■□□□ 1.42
TMC6-209ENST00000588087 CCDC102AQ96A19 550 aa23.9■■□□□ 1.42
TMC6-209ENST00000588087 FAN1Q9Y2M0 1017 aa23.9■■□□□ 1.42
TMC6-209ENST00000588087 NPHP3-ACAD11A0A0J9YXS1 232 aa23.89■■□□□ 1.42
TMC6-209ENST00000588087 LMAN1P49257 510 aa23.89■■□□□ 1.42
TMC6-209ENST00000588087 LRRC63Q05C16 580 aa23.89■■□□□ 1.42
TMC6-209ENST00000588087 PPP4R3AQ6IN85 833 aa23.89■■□□□ 1.42
TMC6-209ENST00000588087 CDC42EP5Q6NZY7 148 aa23.89■■□□□ 1.42
TMC6-209ENST00000588087 DNAJC19Q96DA6 116 aa23.89■■□□□ 1.42
TMC6-209ENST00000588087 PSTPIP2Q9H939 334 aa23.89■■□□□ 1.42
TMC6-209ENST00000588087 KANSL2Q9H9L4 492 aa23.89■■□□□ 1.42
TMC6-209ENST00000588087 E9PMD0 336 aa23.89■■□□□ 1.41
TMC6-209ENST00000588087 EIF3JO75822 258 aaKnown RBP23.89■■□□□ 1.41
TMC6-209ENST00000588087 HNRNPH3P31942 346 aaKnown RBP23.89■■□□□ 1.41
TMC6-209ENST00000588087 TNNT3P45378 269 aaPredicted RBP23.89■■□□□ 1.41
TMC6-209ENST00000588087 CACNB3P54284 484 aa23.89■■□□□ 1.41
TMC6-209ENST00000588087 ANKRD13CQ8N6S4 541 aa23.89■■□□□ 1.41
TMC6-209ENST00000588087 PSMB7Q99436 277 aa23.89■■□□□ 1.41
TMC6-209ENST00000588087 COA1Q9GZY4 146 aa23.89■■□□□ 1.41
TMC6-209ENST00000588087 ZBTB5O15062 677 aa23.88■■□□□ 1.41
TMC6-209ENST00000588087 GPS2Q13227 327 aa23.88■■□□□ 1.41
TMC6-209ENST00000588087 PPP1R18Q6NYC8 613 aa23.88■■□□□ 1.41
TMC6-209ENST00000588087 NELFCDQ8IXH7 590 aa23.88■■□□□ 1.41
TMC6-209ENST00000588087 SEPT12Q8IYM1 358 aa23.88■■□□□ 1.41
TMC6-209ENST00000588087 MYOCDQ8IZQ8 938 aa23.88■■□□□ 1.41
TMC6-209ENST00000588087 BAP1Q92560 729 aa23.88■■□□□ 1.41
TMC6-209ENST00000588087 PCDHAC2Q9Y5I4 1007 aa23.88■■□□□ 1.41
TMC6-209ENST00000588087 AKR1B10O60218 316 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms