RNA–Protein interactions for RNA: ENST00000588062.5

TRAPPC6A-204, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2 BASIC

Gene TRAPPC6A, Length 695 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-204ENST00000588062 STOX1Q6ZVD7 989 aa18.07■□□□□ 0.48
TRAPPC6A-204ENST00000588062 USP38Q8NB14 1042 aa18.07■□□□□ 0.48
TRAPPC6A-204ENST00000588062 CTAGE1Q96RT6 745 aa18.07■□□□□ 0.48
TRAPPC6A-204ENST00000588062 PRDM12Q9H4Q4 367 aa18.07■□□□□ 0.48
TRAPPC6A-204ENST00000588062 RIOX1Q9H6W3 641 aa18.07■□□□□ 0.48
TRAPPC6A-204ENST00000588062 PCDHA1Q9Y5I3 950 aa18.07■□□□□ 0.48
TRAPPC6A-204ENST00000588062 NCOR1O75376 2440 aa18.06■□□□□ 0.48
TRAPPC6A-204ENST00000588062 E7EWF7 191 aa18.06■□□□□ 0.48
TRAPPC6A-204ENST00000588062 PITPNM1O00562 1244 aa18.06■□□□□ 0.48
TRAPPC6A-204ENST00000588062 RGS20O76081 388 aa18.06■□□□□ 0.48
TRAPPC6A-204ENST00000588062 PFKMP08237 780 aa18.06■□□□□ 0.48
TRAPPC6A-204ENST00000588062 IQCF3P0C7M6 154 aa18.06■□□□□ 0.48
TRAPPC6A-204ENST00000588062 TROAPQ12815 778 aa18.06■□□□□ 0.48
TRAPPC6A-204ENST00000588062 CHST3Q7LGC8 479 aa18.06■□□□□ 0.48
TRAPPC6A-204ENST00000588062 DEFB128Q7Z7B8 93 aa18.06■□□□□ 0.48
TRAPPC6A-204ENST00000588062 PDCD2LQ9BRP1 358 aa18.06■□□□□ 0.48
TRAPPC6A-204ENST00000588062 NKX2-4Q9H2Z4 354 aa18.06■□□□□ 0.48
TRAPPC6A-204ENST00000588062 MAP3K20Q9NYL2 800 aaKnown RBP18.06■□□□□ 0.48
TRAPPC6A-204ENST00000588062 SLC4A7Q9Y6M7 1214 aa18.06■□□□□ 0.48
TRAPPC6A-204ENST00000588062 IFIT3O14879 490 aaKnown RBP18.05■□□□□ 0.48
TRAPPC6A-204ENST00000588062 CYTH3O43739 400 aa18.05■□□□□ 0.48
TRAPPC6A-204ENST00000588062 RABGGTBP53611 331 aa18.05■□□□□ 0.48
TRAPPC6A-204ENST00000588062 VSIG10LQ86VR7 867 aa18.05■□□□□ 0.48
TRAPPC6A-204ENST00000588062 SESTD1Q86VW0 696 aa18.05■□□□□ 0.48
TRAPPC6A-204ENST00000588062 SAMD3Q8N6K7 520 aa18.05■□□□□ 0.48
TRAPPC6A-204ENST00000588062 MAP4K1Q92918 833 aa18.05■□□□□ 0.48
TRAPPC6A-204ENST00000588062 EMID1Q96A84 441 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC6A-204ENST00000588062 PIGSQ96S52 555 aa18.05■□□□□ 0.48
TRAPPC6A-204ENST00000588062 HOXA13P31271 388 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC6A-204ENST00000588062 RFC2P35250 354 aa18.04■□□□□ 0.48
TRAPPC6A-204ENST00000588062 ANTXR2P58335 489 aa18.04■□□□□ 0.48
TRAPPC6A-204ENST00000588062 ADGRE1Q14246 886 aa18.04■□□□□ 0.48
TRAPPC6A-204ENST00000588062 GDF6Q6KF10 455 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC6A-204ENST00000588062 NCOA7Q8NI08 942 aa18.04■□□□□ 0.48
TRAPPC6A-204ENST00000588062 IGDCC4Q8TDY8 1250 aa18.04■□□□□ 0.48
TRAPPC6A-204ENST00000588062 GAS2L1Q99501 681 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC6A-204ENST00000588062 SLC28A3Q9HAS3 691 aa18.04■□□□□ 0.48
TRAPPC6A-204ENST00000588062 MRVI1Q9Y6F6 885 aa18.04■□□□□ 0.48
TRAPPC6A-204ENST00000588062 TANC1Q9C0D5 1861 aa18.03■□□□□ 0.48
TRAPPC6A-204ENST00000588062 ZBBXA8MT70 800 aa18.03■□□□□ 0.48
TRAPPC6A-204ENST00000588062 MYOGP15173 224 aa18.03■□□□□ 0.48
TRAPPC6A-204ENST00000588062 ATP2A2P16615 1042 aaKnown RBP18.03■□□□□ 0.48
TRAPPC6A-204ENST00000588062 CASTP20810 708 aaKnown RBP18.03■□□□□ 0.48
TRAPPC6A-204ENST00000588062 CHMP4BP1P59074 171 aa18.03■□□□□ 0.48
TRAPPC6A-204ENST00000588062 BFSP2Q13515 415 aa18.03■□□□□ 0.48
TRAPPC6A-204ENST00000588062 GPNMBQ14956 572 aa18.03■□□□□ 0.48
TRAPPC6A-204ENST00000588062 WTAPQ15007 396 aa18.03■□□□□ 0.48
TRAPPC6A-204ENST00000588062 PTGISQ16647 500 aa18.03■□□□□ 0.48
TRAPPC6A-204ENST00000588062 DGKDQ16760 1214 aa18.03■□□□□ 0.48
TRAPPC6A-204ENST00000588062 HOMER1Q86YM7 354 aa18.03■□□□□ 0.48
TRAPPC6A-204ENST00000588062 MB21D2Q8IYB1 491 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC6A-204ENST00000588062 RETREG2Q8NC44 543 aa18.03■□□□□ 0.48
TRAPPC6A-204ENST00000588062 IL31RAQ8NI17 732 aa18.03■□□□□ 0.48
TRAPPC6A-204ENST00000588062 PCDHA11Q9Y5I1 949 aa18.03■□□□□ 0.48
TRAPPC6A-204ENST00000588062 SPTBN5Q9NRC6 3674 aaKnown RBP18.03■□□□□ 0.48
TRAPPC6A-204ENST00000588062 PNMA6FA0A0J9YX94 578 aa18.02■□□□□ 0.48
TRAPPC6A-204ENST00000588062 HAS3O00219 553 aa18.02■□□□□ 0.48
TRAPPC6A-204ENST00000588062 MYCLP12524 364 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC6A-204ENST00000588062 HOXD8P13378 290 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC6A-204ENST00000588062 LAMC2Q13753 1193 aa18.02■□□□□ 0.48
TRAPPC6A-204ENST00000588062 PGM5Q15124 567 aa18.02■□□□□ 0.48
TRAPPC6A-204ENST00000588062 RALYLQ86SE5 291 aaKnown RBP18.02■□□□□ 0.48
TRAPPC6A-204ENST00000588062 PPTC7Q8NI37 304 aa18.02■□□□□ 0.48
TRAPPC6A-204ENST00000588062 DHX38Q92620 1227 aaKnown RBP18.02■□□□□ 0.48
TRAPPC6A-204ENST00000588062 NOD1Q9Y239 953 aa18.02■□□□□ 0.48
TRAPPC6A-204ENST00000588062 ERICH2A1L162 156 aa18.01■□□□□ 0.47
TRAPPC6A-204ENST00000588062 SP2Q02086 613 aa18.01■□□□□ 0.47
TRAPPC6A-204ENST00000588062 TMEM67Q5HYA8 995 aa18.01■□□□□ 0.47
TRAPPC6A-204ENST00000588062 MYSM1Q5VVJ2 828 aa18.01■□□□□ 0.47
TRAPPC6A-204ENST00000588062 DHX37Q8IY37 1157 aaKnown RBP18.01■□□□□ 0.47
TRAPPC6A-204ENST00000588062 CAGE1Q8TC20 777 aa18.01■□□□□ 0.47
TRAPPC6A-204ENST00000588062 PRDM6Q9NQX0 595 aa18.01■□□□□ 0.47
TRAPPC6A-204ENST00000588062 HDAC6Q9UBN7 1215 aa18.01■□□□□ 0.47
TRAPPC6A-204ENST00000588062 GTF2IRD1Q9UHL9 959 aa18.01■□□□□ 0.47
TRAPPC6A-204ENST00000588062 RBM8AQ9Y5S9 174 aaKnown RBP18.01■□□□□ 0.47
TRAPPC6A-204ENST00000588062 PRRC2BQ5JSZ5 2229 aaKnown RBP18■□□□□ 0.47
TRAPPC6A-204ENST00000588062 BDP1A6H8Y1 2624 aa18■□□□□ 0.47
TRAPPC6A-204ENST00000588062 GCOM1H8Y6P7 765 aaPredicted RBP18■□□□□ 0.47
TRAPPC6A-204ENST00000588062 F2P00734 622 aa18■□□□□ 0.47
TRAPPC6A-204ENST00000588062 POLR2MP0CAP2 368 aa18■□□□□ 0.47
TRAPPC6A-204ENST00000588062 ACTN1P12814 892 aa18■□□□□ 0.47
TRAPPC6A-204ENST00000588062 PSEN2P49810 448 aa18■□□□□ 0.47
TRAPPC6A-204ENST00000588062 RBL2Q08999 1139 aa18■□□□□ 0.47
TRAPPC6A-204ENST00000588062 TRAF1Q13077 416 aa18■□□□□ 0.47
TRAPPC6A-204ENST00000588062 SART3Q15020 963 aaKnown RBP18■□□□□ 0.47
TRAPPC6A-204ENST00000588062 CELF3Q5SZQ8 465 aaKnown RBP18■□□□□ 0.47
TRAPPC6A-204ENST00000588062 KCNV1Q6PIU1 500 aa18■□□□□ 0.47
TRAPPC6A-204ENST00000588062 FCHSD1Q86WN1 690 aa18■□□□□ 0.47
TRAPPC6A-204ENST00000588062 GPKOWQ92917 476 aaPredicted RBP eCLIP18■□□□□ 0.47
TRAPPC6A-204ENST00000588062 ZFP91Q96JP5 570 aaPredicted RBP18■□□□□ 0.47
TRAPPC6A-204ENST00000588062 REV3LO60673 3130 aa18■□□□□ 0.47
TRAPPC6A-204ENST00000588062 PPFIA4O75335 1185 aa17.99■□□□□ 0.47
TRAPPC6A-204ENST00000588062 ZNF286BP0CG31 522 aa17.99■□□□□ 0.47
TRAPPC6A-204ENST00000588062 TGFB3P10600 412 aa17.99■□□□□ 0.47
TRAPPC6A-204ENST00000588062 COL9A3Q14050 684 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC6A-204ENST00000588062 MFSD10Q14728 455 aa17.99■□□□□ 0.47
TRAPPC6A-204ENST00000588062 HSDL1Q3SXM5 330 aa17.99■□□□□ 0.47
TRAPPC6A-204ENST00000588062 PPP2R2DQ66LE6 453 aa17.99■□□□□ 0.47
TRAPPC6A-204ENST00000588062 CATIPQ7Z7H3 387 aa17.99■□□□□ 0.47
TRAPPC6A-204ENST00000588062 PHOSPHO2Q8TCD6 241 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms