RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 KCNV1Q6PIU1 500 aa13.58□□□□□ -0.24
SDHDP1-201ENST00000588055 SEPT14Q6ZU15 432 aa13.58□□□□□ -0.24
SDHDP1-201ENST00000588055 TLK2Q86UE8 772 aa13.58□□□□□ -0.24
SDHDP1-201ENST00000588055 TMX3Q96JJ7 454 aa13.58□□□□□ -0.24
SDHDP1-201ENST00000588055 WDR11Q9BZH6 1224 aa13.58□□□□□ -0.24
SDHDP1-201ENST00000588055 KATNBL1Q9H079 304 aa13.58□□□□□ -0.24
SDHDP1-201ENST00000588055 AP5M1Q9H0R1 490 aa13.58□□□□□ -0.24
SDHDP1-201ENST00000588055 PCDHA4Q9UN74 947 aa13.58□□□□□ -0.24
SDHDP1-201ENST00000588055 DDX49Q9Y6V7 483 aaKnown RBP13.58□□□□□ -0.24
SDHDP1-201ENST00000588055 KIAA1217Q5T5P2 1943 aa13.58□□□□□ -0.24
SDHDP1-201ENST00000588055 DNM1LO00429 736 aa13.57□□□□□ -0.24
SDHDP1-201ENST00000588055 JAK2O60674 1132 aa13.57□□□□□ -0.24
SDHDP1-201ENST00000588055 C6orf222P0C671 652 aaPredicted RBP13.57□□□□□ -0.24
SDHDP1-201ENST00000588055 TXNP10599 105 aaKnown RBP13.57□□□□□ -0.24
SDHDP1-201ENST00000588055 EN2P19622 333 aaPredicted RBP13.57□□□□□ -0.24
SDHDP1-201ENST00000588055 JAKMIP3Q5VZ66 844 aa13.57□□□□□ -0.24
SDHDP1-201ENST00000588055 LHX8Q68G74 356 aa13.57□□□□□ -0.24
SDHDP1-201ENST00000588055 NLRX1Q86UT6 975 aa13.57□□□□□ -0.24
SDHDP1-201ENST00000588055 VSIG10LQ86VR7 867 aa13.57□□□□□ -0.24
SDHDP1-201ENST00000588055 HSCBQ8IWL3 235 aa13.57□□□□□ -0.24
SDHDP1-201ENST00000588055 IL31RAQ8NI17 732 aa13.57□□□□□ -0.24
SDHDP1-201ENST00000588055 LENG1Q96BZ8 264 aaPredicted RBP13.57□□□□□ -0.24
SDHDP1-201ENST00000588055 SHISA4Q96DD7 197 aa13.57□□□□□ -0.24
SDHDP1-201ENST00000588055 CDHR1Q96JP9 859 aa13.57□□□□□ -0.24
SDHDP1-201ENST00000588055 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.57□□□□□ -0.24
SDHDP1-201ENST00000588055 SYNRGQ9UMZ2 1314 aa13.57□□□□□ -0.24
SDHDP1-201ENST00000588055 ZEB2O60315 1214 aa13.56□□□□□ -0.24
SDHDP1-201ENST00000588055 ZNF76P36508 570 aa13.56□□□□□ -0.24
SDHDP1-201ENST00000588055 SREBF1P36956 1147 aa13.56□□□□□ -0.24
SDHDP1-201ENST00000588055 CLK2P49760 499 aaKnown RBP13.56□□□□□ -0.24
SDHDP1-201ENST00000588055 SAFBQ15424 915 aaKnown RBP eCLIP13.56□□□□□ -0.24
SDHDP1-201ENST00000588055 DUSP28Q4G0W2 176 aa13.56□□□□□ -0.24
SDHDP1-201ENST00000588055 TAPT1Q6NXT6 567 aa13.56□□□□□ -0.24
SDHDP1-201ENST00000588055 BLIDQ8IZY5 108 aa13.56□□□□□ -0.24
SDHDP1-201ENST00000588055 DAGLBQ8NCG7 672 aa13.56□□□□□ -0.24
SDHDP1-201ENST00000588055 AIFM3Q96NN9 605 aa13.56□□□□□ -0.24
SDHDP1-201ENST00000588055 PDGFCQ9NRA1 345 aa13.56□□□□□ -0.24
SDHDP1-201ENST00000588055 TMEM260Q9NX78 707 aa13.56□□□□□ -0.24
SDHDP1-201ENST00000588055 CCDC194A0A1B0GVG4 234 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 RBM47A0AV96 593 aaKnown RBP13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 FIBPO43427 364 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 CD2BP2O95400 341 aaKnown RBP13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 PGK1P00558 417 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 SMPD1P17405 629 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 KRT2P35908 639 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 CPT1AP50416 773 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 FOSBP53539 338 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 ARHGAP4P98171 946 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 ST3GAL1Q11201 340 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 MTMR1Q13613 665 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 GNL2Q13823 731 aaKnown RBP13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 KRT25Q7Z3Z0 450 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 NECAB2Q7Z6G3 386 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 PCSK9Q8NBP7 692 aaKnown RBP13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 OR6J1Q8NGC5 347 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 GPRASP2Q96D09 838 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 PGBD1Q96JS3 809 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 C8orf76Q96K31 380 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 PHF20Q9BVI0 1012 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 KCNJ14Q9UNX9 436 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 SMC3Q9UQE7 1217 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 Q9Y3F1 56 aa13.55□□□□□ -0.24
SDHDP1-201ENST00000588055 GH1P01241 217 aa13.54□□□□□ -0.24
SDHDP1-201ENST00000588055 TGFB3P10600 412 aa13.54□□□□□ -0.24
SDHDP1-201ENST00000588055 GJA9P57773 515 aa13.54□□□□□ -0.24
SDHDP1-201ENST00000588055 SETQ01105 290 aaPredicted RBP13.54□□□□□ -0.24
SDHDP1-201ENST00000588055 LRRC41Q15345 812 aa13.54□□□□□ -0.24
SDHDP1-201ENST00000588055 FSCN1Q16658 493 aaKnown RBP13.54□□□□□ -0.24
SDHDP1-201ENST00000588055 GJC2Q5T442 439 aaPredicted RBP13.54□□□□□ -0.24
SDHDP1-201ENST00000588055 IFFO2Q5TF58 517 aa13.54□□□□□ -0.24
SDHDP1-201ENST00000588055 GIMAP8Q8ND71 665 aaPredicted RBP13.54□□□□□ -0.24
SDHDP1-201ENST00000588055 RASGRP4Q8TDF6 673 aa13.54□□□□□ -0.24
SDHDP1-201ENST00000588055 INPP4AQ96PE3 977 aaPredicted RBP13.54□□□□□ -0.24
SDHDP1-201ENST00000588055 HTATIP2Q9BUP3 242 aa13.54□□□□□ -0.24
SDHDP1-201ENST00000588055 UPF3AQ9H1J1 476 aaKnown RBP13.54□□□□□ -0.24
SDHDP1-201ENST00000588055 C11orf49Q9H6J7 331 aa13.54□□□□□ -0.24
SDHDP1-201ENST00000588055 RTEL1Q9NZ71 1219 aa13.54□□□□□ -0.24
SDHDP1-201ENST00000588055 TCEAL9Q9UHQ7 104 aa13.54□□□□□ -0.24
SDHDP1-201ENST00000588055 GNEQ9Y223 722 aaKnown RBP13.54□□□□□ -0.24
SDHDP1-201ENST00000588055 MOXD2PA6NHM9 499 aa13.53□□□□□ -0.24
SDHDP1-201ENST00000588055 K7ELQ4 463 aaPredicted RBP13.53□□□□□ -0.24
SDHDP1-201ENST00000588055 DYNC1LI2O43237 492 aaPredicted RBP13.53□□□□□ -0.24
SDHDP1-201ENST00000588055 ADCY6O43306 1168 aa13.53□□□□□ -0.24
SDHDP1-201ENST00000588055 ADAMTS4O75173 837 aa13.53□□□□□ -0.24
SDHDP1-201ENST00000588055 MMP1P03956 469 aa13.53□□□□□ -0.24
SDHDP1-201ENST00000588055 HSP90AA1P07900 732 aaKnown RBP13.53□□□□□ -0.24
SDHDP1-201ENST00000588055 FDPSP14324 419 aaKnown RBP13.53□□□□□ -0.24
SDHDP1-201ENST00000588055 CST5P28325 142 aaPredicted RBP13.53□□□□□ -0.24
SDHDP1-201ENST00000588055 MRPS9P82933 396 aaKnown RBP13.53□□□□□ -0.24
SDHDP1-201ENST00000588055 NEDD9Q14511 834 aa13.53□□□□□ -0.24
SDHDP1-201ENST00000588055 NONOQ15233 471 aaKnown RBP eCLIP13.53□□□□□ -0.24
SDHDP1-201ENST00000588055 GNASQ5JWF2 1037 aa13.53□□□□□ -0.24
SDHDP1-201ENST00000588055 DHX37Q8IY37 1157 aaKnown RBP13.53□□□□□ -0.24
SDHDP1-201ENST00000588055 TSEN34Q9BSV6 310 aaKnown RBP13.53□□□□□ -0.24
SDHDP1-201ENST00000588055 NOP56O00567 594 aaKnown RBP13.52□□□□□ -0.25
SDHDP1-201ENST00000588055 MAFGO15525 162 aa13.52□□□□□ -0.25
SDHDP1-201ENST00000588055 DTNBO60941 627 aa13.52□□□□□ -0.25
SDHDP1-201ENST00000588055 ARIH2O95376 493 aa13.52□□□□□ -0.25
SDHDP1-201ENST00000588055 UBA1P22314 1058 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms