RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 TIGD5Q53EQ6 642 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 SYDE2Q5VT97 1194 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 TSHZ3Q63HK5 1081 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 TTBK2Q6IQ55 1244 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 HFE2Q6ZVN8 426 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 NEK9Q8TD19 979 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 DCAF4Q8WV16 495 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 AFG1LQ8WV93 481 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 MRPL38Q96DV4 380 aaKnown RBP10.09□□□□□ -0.79
SDF2-204ENST00000587338 LRRCC1Q9C099 1032 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 ECHDC1Q9NTX5 307 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 PPP4R2Q9NY27 417 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 FAM50BQ9Y247 325 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 INSL6Q9Y581 213 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 FRMPD2Q68DX3 1309 aaPredicted RBP10.08□□□□□ -0.8
SDF2-204ENST00000587338 POTEB3A0JP26 581 aa10.08□□□□□ -0.8
SDF2-204ENST00000587338 MMP3P08254 477 aa10.08□□□□□ -0.8
SDF2-204ENST00000587338 EDNRBP24530 442 aa10.08□□□□□ -0.8
SDF2-204ENST00000587338 RPS6P62753 249 aaKnown RBP10.08□□□□□ -0.8
SDF2-204ENST00000587338 RBL2Q08999 1139 aa10.08□□□□□ -0.8
SDF2-204ENST00000587338 TCEAL5Q5H9L2 206 aa10.08□□□□□ -0.8
SDF2-204ENST00000587338 POTEBQ6S5H4 581 aa10.08□□□□□ -0.8
SDF2-204ENST00000587338 CHST3Q7LGC8 479 aa10.08□□□□□ -0.8
SDF2-204ENST00000587338 SESTD1Q86VW0 696 aa10.08□□□□□ -0.8
SDF2-204ENST00000587338 MYOCDQ8IZQ8 938 aa10.08□□□□□ -0.8
SDF2-204ENST00000587338 C7orf31Q8N865 590 aa10.08□□□□□ -0.8
SDF2-204ENST00000587338 BANK1Q8NDB2 785 aa10.08□□□□□ -0.8
SDF2-204ENST00000587338 CLEC4DQ8WXI8 215 aa10.08□□□□□ -0.8
SDF2-204ENST00000587338 GPATCH3Q96I76 525 aa10.08□□□□□ -0.8
SDF2-204ENST00000587338 PHOX2BQ99453 314 aa10.08□□□□□ -0.8
SDF2-204ENST00000587338 GPCPD1Q9NPB8 672 aa10.08□□□□□ -0.8
SDF2-204ENST00000587338 CTNNA3Q9UI47 895 aa10.08□□□□□ -0.8
SDF2-204ENST00000587338 MYO7AQ13402 2215 aa10.08□□□□□ -0.8
SDF2-204ENST00000587338 SPTBN4Q9H254 2564 aa10.08□□□□□ -0.8
SDF2-204ENST00000587338 CACNA1HO95180 2353 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 B4DLN1 442 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 RANBP6O60518 1105 aaKnown RBP10.07□□□□□ -0.8
SDF2-204ENST00000587338 GH1P01241 217 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 AMHP03971 560 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 MRPL12P52815 198 aaKnown RBP10.07□□□□□ -0.8
SDF2-204ENST00000587338 CTDSPL2Q05D32 466 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 LY6KQ17RY6 165 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 EPC2Q52LR7 807 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 B4GALNT3Q6L9W6 998 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.07□□□□□ -0.8
SDF2-204ENST00000587338 ADHFE1Q8IWW8 467 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 DNERQ8NFT8 737 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 KAT2BQ92831 832 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 PABPC5Q96DU9 382 aaKnown RBP10.07□□□□□ -0.8
SDF2-204ENST00000587338 CCDC136Q96JN2 1154 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 MFSD14AQ96MC6 490 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 ALG1Q9BT22 464 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 INCENPQ9NQS7 918 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 IL17RBQ9NRM6 502 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 ZBTB40Q9NUA8 1239 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 CLDND1Q9NY35 253 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 HDAC6Q9UBN7 1215 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 PRKAG3Q9UGI9 489 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 GTF2IRD1Q9UHL9 959 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 DDX19BQ9UMR2 479 aa10.07□□□□□ -0.8
SDF2-204ENST00000587338 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.07□□□□□ -0.8
SDF2-204ENST00000587338 CACNA1AO00555 2505 aa10.06□□□□□ -0.8
SDF2-204ENST00000587338 WDR87Q6ZQQ6 2873 aa10.06□□□□□ -0.8
SDF2-204ENST00000587338 LGR5O75473 907 aa10.06□□□□□ -0.8
SDF2-204ENST00000587338 CASTP20810 708 aaKnown RBP10.06□□□□□ -0.8
SDF2-204ENST00000587338 IRS1P35568 1242 aa10.06□□□□□ -0.8
SDF2-204ENST00000587338 ARHGAP1Q07960 439 aa10.06□□□□□ -0.8
SDF2-204ENST00000587338 PTK7Q13308 1070 aa10.06□□□□□ -0.8
SDF2-204ENST00000587338 GPM6BQ13491 265 aa10.06□□□□□ -0.8
SDF2-204ENST00000587338 MBTPS1Q14703 1052 aa10.06□□□□□ -0.8
SDF2-204ENST00000587338 CLUL1Q15846 466 aa10.06□□□□□ -0.8
SDF2-204ENST00000587338 TRIM71Q2Q1W2 868 aaKnown RBP10.06□□□□□ -0.8
SDF2-204ENST00000587338 ZNF618Q5T7W0 954 aa10.06□□□□□ -0.8
SDF2-204ENST00000587338 CCDC62Q6P9F0 684 aa10.06□□□□□ -0.8
SDF2-204ENST00000587338 TRAF7Q6Q0C0 670 aa10.06□□□□□ -0.8
SDF2-204ENST00000587338 BTNL9Q6UXG8 535 aa10.06□□□□□ -0.8
SDF2-204ENST00000587338 SEPT14Q6ZU15 432 aa10.06□□□□□ -0.8
SDF2-204ENST00000587338 WNT8BQ93098 351 aa10.06□□□□□ -0.8
SDF2-204ENST00000587338 YME1L1Q96TA2 773 aa10.06□□□□□ -0.8
SDF2-204ENST00000587338 SEC62Q99442 399 aaKnown RBP10.06□□□□□ -0.8
SDF2-204ENST00000587338 UPF3BQ9BZI7 483 aaKnown RBP10.06□□□□□ -0.8
SDF2-204ENST00000587338 NSUN3Q9H649 340 aaKnown RBP10.06□□□□□ -0.8
SDF2-204ENST00000587338 MUTYHQ9UIF7 546 aa10.06□□□□□ -0.8
SDF2-204ENST00000587338 TECTAO75443 2155 aa10.05□□□□□ -0.8
SDF2-204ENST00000587338 C19orf67A6NJJ6 358 aa10.05□□□□□ -0.8
SDF2-204ENST00000587338 H3BNC9 293 aa10.05□□□□□ -0.8
SDF2-204ENST00000587338 ZNF286BP0CG31 522 aa10.05□□□□□ -0.8
SDF2-204ENST00000587338 PSEN2P49810 448 aa10.05□□□□□ -0.8
SDF2-204ENST00000587338 HTRA4P83105 476 aaPredicted RBP10.05□□□□□ -0.8
SDF2-204ENST00000587338 MFSD10Q14728 455 aa10.05□□□□□ -0.8
SDF2-204ENST00000587338 DGKDQ16760 1214 aa10.05□□□□□ -0.8
SDF2-204ENST00000587338 KIAA0753Q2KHM9 967 aa10.05□□□□□ -0.8
SDF2-204ENST00000587338 USH1GQ495M9 461 aa10.05□□□□□ -0.8
SDF2-204ENST00000587338 RPAINQ86UA6 219 aa10.05□□□□□ -0.8
SDF2-204ENST00000587338 SP7Q8TDD2 431 aaPredicted RBP10.05□□□□□ -0.8
SDF2-204ENST00000587338 SAMD11Q96NU1 681 aa10.05□□□□□ -0.8
SDF2-204ENST00000587338 KATNAL1Q9BW62 490 aa10.05□□□□□ -0.8
SDF2-204ENST00000587338 TOMM22Q9NS69 142 aa10.05□□□□□ -0.8
SDF2-204ENST00000587338 PNMA2Q9UL42 364 aa10.05□□□□□ -0.8
SDF2-204ENST00000587338 EMSYQ7Z589 1322 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms