RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 LAMC2Q13753 1193 aa23.34■■□□□ 1.33
VAT1-203ENST00000587062 XRRA1Q6P2D8 792 aa23.34■■□□□ 1.33
VAT1-203ENST00000587062 CCDC62Q6P9F0 684 aa23.34■■□□□ 1.33
VAT1-203ENST00000587062 Q6ZUG5 572 aa23.34■■□□□ 1.33
VAT1-203ENST00000587062 TEX2Q8IWB9 1127 aa23.34■■□□□ 1.33
VAT1-203ENST00000587062 CMTR1Q8N1G2 835 aaKnown RBP23.34■■□□□ 1.33
VAT1-203ENST00000587062 TRIM43Q96BQ3 446 aaPredicted RBP23.34■■□□□ 1.33
VAT1-203ENST00000587062 EHMT1Q9H9B1 1298 aa23.34■■□□□ 1.33
VAT1-203ENST00000587062 hCG_1984214I3L0E3 225 aa23.33■■□□□ 1.33
VAT1-203ENST00000587062 CASTP20810 708 aaKnown RBP23.33■■□□□ 1.33
VAT1-203ENST00000587062 PURAQ00577 322 aaKnown RBP23.33■■□□□ 1.33
VAT1-203ENST00000587062 LY6KQ17RY6 165 aa23.33■■□□□ 1.33
VAT1-203ENST00000587062 LRIT3Q3SXY7 679 aa23.33■■□□□ 1.33
VAT1-203ENST00000587062 TMEM63BQ5T3F8 832 aa23.33■■□□□ 1.33
VAT1-203ENST00000587062 SH3RF1Q7Z6J0 888 aa23.33■■□□□ 1.33
VAT1-203ENST00000587062 DHX37Q8IY37 1157 aaKnown RBP23.33■■□□□ 1.33
VAT1-203ENST00000587062 ZNF713Q8N859 430 aaPredicted RBP23.33■■□□□ 1.33
VAT1-203ENST00000587062 SLC43A3Q8NBI5 491 aa23.33■■□□□ 1.33
VAT1-203ENST00000587062 DDX41Q9UJV9 622 aaKnown RBP23.33■■□□□ 1.33
VAT1-203ENST00000587062 KIAA1217Q5T5P2 1943 aa23.32■■□□□ 1.32
VAT1-203ENST00000587062 TIMP1P01033 207 aa23.32■■□□□ 1.32
VAT1-203ENST00000587062 RPS6KB1P23443 525 aa23.32■■□□□ 1.32
VAT1-203ENST00000587062 METAP2P50579 478 aaKnown RBP eCLIP23.32■■□□□ 1.321e-7■■□□□ 13.4
VAT1-203ENST00000587062 FPGSQ05932 587 aa23.32■■□□□ 1.32
VAT1-203ENST00000587062 DGKDQ16760 1214 aa23.32■■□□□ 1.32
VAT1-203ENST00000587062 HEATR3Q7Z4Q2 680 aa23.32■■□□□ 1.32
VAT1-203ENST00000587062 FAM126BQ8IXS8 530 aa23.32■■□□□ 1.32
VAT1-203ENST00000587062 TMEM199Q8N511 208 aa23.32■■□□□ 1.32
VAT1-203ENST00000587062 COPS5Q92905 334 aa23.32■■□□□ 1.32
VAT1-203ENST00000587062 GLT8D2Q9H1C3 349 aa23.32■■□□□ 1.32
VAT1-203ENST00000587062 BRPF3Q9ULD4 1205 aa23.32■■□□□ 1.32
VAT1-203ENST00000587062 SPDYE3A6NKU9 549 aa23.31■■□□□ 1.32
VAT1-203ENST00000587062 ARIH2O95376 493 aa23.31■■□□□ 1.32
VAT1-203ENST00000587062 COL9A3Q14050 684 aaPredicted RBP23.31■■□□□ 1.32
VAT1-203ENST00000587062 FBXL16Q8N461 479 aa23.31■■□□□ 1.32
VAT1-203ENST00000587062 BRF1Q92994 677 aa23.31■■□□□ 1.32
VAT1-203ENST00000587062 AKAP17AQ02040 695 aaKnown RBP23.3■■□□□ 1.32
VAT1-203ENST00000587062 PTPN11Q06124 597 aaPredicted RBP23.3■■□□□ 1.32
VAT1-203ENST00000587062 USP17L6PQ6QN14 398 aa23.3■■□□□ 1.32
VAT1-203ENST00000587062 NLRX1Q86UT6 975 aa23.3■■□□□ 1.32
VAT1-203ENST00000587062 AFG1LQ8WV93 481 aa23.3■■□□□ 1.32
VAT1-203ENST00000587062 EMID1Q96A84 441 aaPredicted RBP23.3■■□□□ 1.32
VAT1-203ENST00000587062 KATNAL1Q9BW62 490 aa23.3■■□□□ 1.32
VAT1-203ENST00000587062 USP26Q9BXU7 913 aa23.3■■□□□ 1.32
VAT1-203ENST00000587062 MLXIPQ9HAP2 919 aa23.3■■□□□ 1.32
VAT1-203ENST00000587062 CYP46A1Q9Y6A2 500 aa23.3■■□□□ 1.32
VAT1-203ENST00000587062 PTGS1P23219 599 aa23.29■■□□□ 1.32
VAT1-203ENST00000587062 NAPAP54920 295 aa23.29■■□□□ 1.32
VAT1-203ENST00000587062 PSMC6P62333 389 aa23.29■■□□□ 1.32
VAT1-203ENST00000587062 ARHGAP1Q07960 439 aa23.29■■□□□ 1.32
VAT1-203ENST00000587062 APOBRQ0VD83 1088 aa23.29■■□□□ 1.32
VAT1-203ENST00000587062 PPIGQ13427 754 aaKnown RBP eCLIP23.29■■□□□ 1.32
VAT1-203ENST00000587062 FAM47CQ5HY64 1035 aa23.29■■□□□ 1.32
VAT1-203ENST00000587062 MFSD5Q6N075 450 aa23.29■■□□□ 1.32
VAT1-203ENST00000587062 PPP1R18Q6NYC8 613 aa23.29■■□□□ 1.32
VAT1-203ENST00000587062 NFRKBQ6P4R8 1299 aa23.29■■□□□ 1.32
VAT1-203ENST00000587062 RUFY3Q7L099 469 aa23.29■■□□□ 1.32
VAT1-203ENST00000587062 TBX21Q9UL17 535 aa23.29■■□□□ 1.32
VAT1-203ENST00000587062 V9GY48 417 aaPredicted RBP23.29■■□□□ 1.32
VAT1-203ENST00000587062 MEIS2O14770 477 aa23.28■■□□□ 1.32
VAT1-203ENST00000587062 CD4P01730 458 aa23.28■■□□□ 1.32
VAT1-203ENST00000587062 MMP3P08254 477 aa23.28■■□□□ 1.32
VAT1-203ENST00000587062 NEDD9Q14511 834 aa23.28■■□□□ 1.32
VAT1-203ENST00000587062 PCNX4Q63HM2 1172 aa23.28■■□□□ 1.32
VAT1-203ENST00000587062 GPR153Q6NV75 609 aa23.28■■□□□ 1.32
VAT1-203ENST00000587062 PPTC7Q8NI37 304 aa23.28■■□□□ 1.32
VAT1-203ENST00000587062 CDHR1Q96JP9 859 aa23.28■■□□□ 1.32
VAT1-203ENST00000587062 TM6SF1Q9BZW5 370 aa23.28■■□□□ 1.32
VAT1-203ENST00000587062 TRIOBPQ9H2D6 2365 aa23.27■■□□□ 1.32
VAT1-203ENST00000587062 hCG_1642624A0A1W2PR95 340 aa23.27■■□□□ 1.32
VAT1-203ENST00000587062 FIBPO43427 364 aa23.27■■□□□ 1.32
VAT1-203ENST00000587062 PPFIA4O75335 1185 aa23.27■■□□□ 1.32
VAT1-203ENST00000587062 CPA1P15085 419 aa23.27■■□□□ 1.32
VAT1-203ENST00000587062 NBPF20Q3BBV1 942 aa23.27■■□□□ 1.32
VAT1-203ENST00000587062 GIMAP8Q8ND71 665 aaPredicted RBP23.27■■□□□ 1.32
VAT1-203ENST00000587062 CCDC12Q8WUD4 166 aaPredicted RBP23.27■■□□□ 1.32
VAT1-203ENST00000587062 ALDH8A1Q9H2A2 487 aaPredicted RBP23.27■■□□□ 1.32
VAT1-203ENST00000587062 HIPK3Q9H422 1215 aa23.27■■□□□ 1.32
VAT1-203ENST00000587062 NOD1Q9Y239 953 aa23.27■■□□□ 1.32
VAT1-203ENST00000587062 FRMPD4Q14CM0 1322 aa23.27■■□□□ 1.32
VAT1-203ENST00000587062 CNTNAP5Q8WYK1 1306 aa23.27■■□□□ 1.32
VAT1-203ENST00000587062 LTBP2Q14767 1821 aa23.26■■□□□ 1.31
VAT1-203ENST00000587062 GGPS1O95749 300 aa23.26■■□□□ 1.31
VAT1-203ENST00000587062 FOSP01100 380 aaPredicted RBP23.26■■□□□ 1.31
VAT1-203ENST00000587062 CHMP4BP1P59074 171 aa23.26■■□□□ 1.31
VAT1-203ENST00000587062 CELF3Q5SZQ8 465 aaKnown RBP23.26■■□□□ 1.31
VAT1-203ENST00000587062 SPATA33Q96N06 139 aa23.26■■□□□ 1.31
VAT1-203ENST00000587062 PPP1R12CQ9BZL4 782 aa23.26■■□□□ 1.31
VAT1-203ENST00000587062 ZSWIM6Q9HCJ5 1215 aa23.26■■□□□ 1.31
VAT1-203ENST00000587062 GRIN2DO15399 1336 aa23.26■■□□□ 1.31
VAT1-203ENST00000587062 NOP56O00567 594 aaKnown RBP23.25■■□□□ 1.31
VAT1-203ENST00000587062 B4GALT4O60513 344 aa23.25■■□□□ 1.31
VAT1-203ENST00000587062 ICAM3P32942 547 aa23.25■■□□□ 1.31
VAT1-203ENST00000587062 MYSM1Q5VVJ2 828 aa23.25■■□□□ 1.31
VAT1-203ENST00000587062 MCTP2Q6DN12 878 aa23.25■■□□□ 1.31
VAT1-203ENST00000587062 IL31RAQ8NI17 732 aa23.25■■□□□ 1.31
VAT1-203ENST00000587062 GPKOWQ92917 476 aaPredicted RBP eCLIP23.25■■□□□ 1.31
VAT1-203ENST00000587062 INPP4AQ96PE3 977 aaPredicted RBP23.25■■□□□ 1.31
VAT1-203ENST00000587062 AGXT2Q9BYV1 514 aa23.25■■□□□ 1.31
VAT1-203ENST00000587062 RTEL1Q9NZ71 1219 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms