RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 GNAQP50148 359 aa22.02■■□□□ 1.12
CLPTM1-206ENST00000586975 GHRHRQ02643 423 aa22.02■■□□□ 1.12
CLPTM1-206ENST00000586975 ARHGAP1Q07960 439 aa22.02■■□□□ 1.12
CLPTM1-206ENST00000586975 CCDC82Q8N4S0 544 aa22.02■■□□□ 1.12
CLPTM1-206ENST00000586975 SAMD3Q8N6K7 520 aa22.02■■□□□ 1.12
CLPTM1-206ENST00000586975 NEK1Q96PY6 1258 aa22.02■■□□□ 1.12
CLPTM1-206ENST00000586975 LZTS2Q9BRK4 669 aa22.02■■□□□ 1.12
CLPTM1-206ENST00000586975 SPZ1Q9BXG8 430 aa22.02■■□□□ 1.12
CLPTM1-206ENST00000586975 DDX41Q9UJV9 622 aaKnown RBP22.02■■□□□ 1.12
CLPTM1-206ENST00000586975 MMP3P08254 477 aa22.01■■□□□ 1.11
CLPTM1-206ENST00000586975 CALM1P0DP23 149 aa22.01■■□□□ 1.11
CLPTM1-206ENST00000586975 CALM2P0DP24 149 aa22.01■■□□□ 1.11
CLPTM1-206ENST00000586975 CALM3P0DP25 149 aa22.01■■□□□ 1.11
CLPTM1-206ENST00000586975 CYP2C9P11712 490 aa22.01■■□□□ 1.11
CLPTM1-206ENST00000586975 LIFRP42702 1097 aa22.01■■□□□ 1.11
CLPTM1-206ENST00000586975 PGM5Q15124 567 aa22.01■■□□□ 1.11
CLPTM1-206ENST00000586975 SRBD1Q8N5C6 995 aaKnown RBP22.01■■□□□ 1.11
CLPTM1-206ENST00000586975 IL31RAQ8NI17 732 aa22.01■■□□□ 1.11
CLPTM1-206ENST00000586975 NOC4LQ9BVI4 516 aaKnown RBP22.01■■□□□ 1.11
CLPTM1-206ENST00000586975 SUPT20HL2P0C7V6 817 aa22■■□□□ 1.11
CLPTM1-206ENST00000586975 CCND2P30279 289 aa22■■□□□ 1.11
CLPTM1-206ENST00000586975 SMAD3P84022 425 aaKnown RBP22■■□□□ 1.11
CLPTM1-206ENST00000586975 TMEM240Q5SV17 173 aa22■■□□□ 1.11
CLPTM1-206ENST00000586975 SYNE3Q6ZMZ3 975 aa22■■□□□ 1.11
CLPTM1-206ENST00000586975 ZNF365Q70YC5 407 aa22■■□□□ 1.11
CLPTM1-206ENST00000586975 C16orf59Q7L2K0 433 aa22■■□□□ 1.11
CLPTM1-206ENST00000586975 VSIG10LQ86VR7 867 aa22■■□□□ 1.11
CLPTM1-206ENST00000586975 MICU3Q86XE3 530 aa22■■□□□ 1.11
CLPTM1-206ENST00000586975 DHX37Q8IY37 1157 aaKnown RBP22■■□□□ 1.11
CLPTM1-206ENST00000586975 TCEANC2Q96MN5 208 aa22■■□□□ 1.11
CLPTM1-206ENST00000586975 BAZ2BQ9UIF8 2168 aaKnown RBP21.99■■□□□ 1.11
CLPTM1-206ENST00000586975 hCG_1642624A0A1W2PR95 340 aa21.99■■□□□ 1.11
CLPTM1-206ENST00000586975 NEFLP07196 543 aa21.99■■□□□ 1.11
CLPTM1-206ENST00000586975 CASTP20810 708 aaKnown RBP21.99■■□□□ 1.11
CLPTM1-206ENST00000586975 FAM109BQ6ICB4 259 aaPredicted RBP21.99■■□□□ 1.11
CLPTM1-206ENST00000586975 SMARCC2Q8TAQ2 1214 aa21.99■■□□□ 1.11
CLPTM1-206ENST00000586975 CUL5Q93034 780 aa21.99■■□□□ 1.11
CLPTM1-206ENST00000586975 IL23AQ9NPF7 189 aa21.99■■□□□ 1.11
CLPTM1-206ENST00000586975 NOD1Q9Y239 953 aa21.99■■□□□ 1.11
CLPTM1-206ENST00000586975 LAMC2Q13753 1193 aa21.98■■□□□ 1.11
CLPTM1-206ENST00000586975 DGKDQ16760 1214 aa21.98■■□□□ 1.11
CLPTM1-206ENST00000586975 NFRKBQ6P4R8 1299 aa21.98■■□□□ 1.11
CLPTM1-206ENST00000586975 PSRC1Q6PGN9 363 aaPredicted RBP21.98■■□□□ 1.11
CLPTM1-206ENST00000586975 RASEFQ8IZ41 740 aa21.98■■□□□ 1.11
CLPTM1-206ENST00000586975 FANCBQ8NB91 859 aa21.98■■□□□ 1.11
CLPTM1-206ENST00000586975 SCLYQ96I15 445 aa21.98■■□□□ 1.11
CLPTM1-206ENST00000586975 WNT8AQ9H1J5 351 aa21.98■■□□□ 1.11
CLPTM1-206ENST00000586975 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.97■■□□□ 1.11
CLPTM1-206ENST00000586975 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.97■■□□□ 1.11
CLPTM1-206ENST00000586975 RGS20O76081 388 aa21.97■■□□□ 1.11
CLPTM1-206ENST00000586975 SMARCA1P28370 1054 aa21.97■■□□□ 1.11
CLPTM1-206ENST00000586975 ADCK5Q3MIX3 580 aa21.97■■□□□ 1.11
CLPTM1-206ENST00000586975 KCNV1Q6PIU1 500 aa21.97■■□□□ 1.11
CLPTM1-206ENST00000586975 USP17L6PQ6QN14 398 aa21.97■■□□□ 1.11
CLPTM1-206ENST00000586975 RTEL1Q9NZ71 1219 aa21.97■■□□□ 1.11
CLPTM1-206ENST00000586975 GGPS1O95749 300 aa21.96■■□□□ 1.11
CLPTM1-206ENST00000586975 FGBP02675 491 aa21.96■■□□□ 1.11
CLPTM1-206ENST00000586975 DHX32Q7L7V1 743 aaKnown RBP21.96■■□□□ 1.11
CLPTM1-206ENST00000586975 SPATA33Q96N06 139 aa21.96■■□□□ 1.11
CLPTM1-206ENST00000586975 GUCD1Q96NT3 240 aa21.96■■□□□ 1.11
CLPTM1-206ENST00000586975 SEMA6BQ9H3T3 888 aa21.96■■□□□ 1.11
CLPTM1-206ENST00000586975 NAP1L2Q9ULW6 460 aaPredicted RBP21.96■■□□□ 1.11
CLPTM1-206ENST00000586975 STXBP5LQ9Y2K9 1186 aa21.96■■□□□ 1.11
CLPTM1-206ENST00000586975 ZNF286BP0CG31 522 aa21.95■■□□□ 1.1
CLPTM1-206ENST00000586975 FGD1P98174 961 aa21.95■■□□□ 1.1
CLPTM1-206ENST00000586975 PTPN11Q06124 597 aaPredicted RBP21.95■■□□□ 1.1
CLPTM1-206ENST00000586975 KRT32Q14532 448 aa21.95■■□□□ 1.1
CLPTM1-206ENST00000586975 CELF3Q5SZQ8 465 aaKnown RBP21.95■■□□□ 1.1
CLPTM1-206ENST00000586975 TMTC3Q6ZXV5 915 aa21.95■■□□□ 1.1
CLPTM1-206ENST00000586975 OTOP2Q7RTS6 562 aa21.95■■□□□ 1.1
CLPTM1-206ENST00000586975 SGMS1Q86VZ5 419 aa21.95■■□□□ 1.1
CLPTM1-206ENST00000586975 GPKOWQ92917 476 aaPredicted RBP eCLIP21.95■■□□□ 1.1
CLPTM1-206ENST00000586975 ALG1Q9BT22 464 aa21.95■■□□□ 1.1
CLPTM1-206ENST00000586975 MLXIPQ9HAP2 919 aa21.95■■□□□ 1.1
CLPTM1-206ENST00000586975 COL6A3P12111 3177 aa21.94■■□□□ 1.1
CLPTM1-206ENST00000586975 GRXCR1A8MXD5 290 aa21.94■■□□□ 1.1
CLPTM1-206ENST00000586975 UBA1P22314 1058 aaKnown RBP21.94■■□□□ 1.1
CLPTM1-206ENST00000586975 EXOSC10Q01780 885 aaKnown RBP21.94■■□□□ 1.1
CLPTM1-206ENST00000586975 SP2Q02086 613 aa21.94■■□□□ 1.1
CLPTM1-206ENST00000586975 PTGISQ16647 500 aa21.94■■□□□ 1.1
CLPTM1-206ENST00000586975 MYSM1Q5VVJ2 828 aa21.94■■□□□ 1.1
CLPTM1-206ENST00000586975 HEATR3Q7Z4Q2 680 aa21.94■■□□□ 1.1
CLPTM1-206ENST00000586975 DEFB128Q7Z7B8 93 aa21.94■■□□□ 1.1
CLPTM1-206ENST00000586975 RPUSD2Q8IZ73 545 aaKnown RBP21.94■■□□□ 1.1
CLPTM1-206ENST00000586975 RETREG2Q8NC44 543 aa21.94■■□□□ 1.1
CLPTM1-206ENST00000586975 SLC17A8Q8NDX2 589 aa21.94■■□□□ 1.1
CLPTM1-206ENST00000586975 PPTC7Q8NI37 304 aa21.94■■□□□ 1.1
CLPTM1-206ENST00000586975 KAT2BQ92831 832 aa21.94■■□□□ 1.1
CLPTM1-206ENST00000586975 EMID1Q96A84 441 aaPredicted RBP21.94■■□□□ 1.1
CLPTM1-206ENST00000586975 MTIF3Q9H2K0 278 aaKnown RBP21.94■■□□□ 1.1
CLPTM1-206ENST00000586975 PSTPIP2Q9H939 334 aa21.94■■□□□ 1.1
CLPTM1-206ENST00000586975 ZBTB43O43298 467 aa21.93■■□□□ 1.1
CLPTM1-206ENST00000586975 DNAJB2P25686 324 aa21.93■■□□□ 1.1
CLPTM1-206ENST00000586975 PSEN2P49810 448 aa21.93■■□□□ 1.1
CLPTM1-206ENST00000586975 MRPS9P82933 396 aaKnown RBP21.93■■□□□ 1.1
CLPTM1-206ENST00000586975 GNPTABQ3T906 1256 aa21.93■■□□□ 1.1
CLPTM1-206ENST00000586975 APOA5Q6Q788 366 aa21.93■■□□□ 1.1
CLPTM1-206ENST00000586975 C7orf31Q8N865 590 aa21.93■■□□□ 1.1
CLPTM1-206ENST00000586975 TTYH1Q9H313 450 aaPredicted RBP21.93■■□□□ 1.1
CLPTM1-206ENST00000586975 CXXC1Q9P0U4 656 aaPredicted RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms