RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 PCNX4Q63HM2 1172 aa16.15■□□□□ 0.18
TPM4-205ENST00000586833 OR6J1Q8NGC5 347 aa16.15■□□□□ 0.18
TPM4-205ENST00000586833 DPF3Q92784 378 aa16.15■□□□□ 0.18
TPM4-205ENST00000586833 ZMYND12Q9H0C1 365 aa16.15■□□□□ 0.18
TPM4-205ENST00000586833 UPF3AQ9H1J1 476 aaKnown RBP16.15■□□□□ 0.18
TPM4-205ENST00000586833 BRMS1Q9HCU9 246 aa16.15■□□□□ 0.18
TPM4-205ENST00000586833 PCDHA6Q9UN73 950 aa16.15■□□□□ 0.18
TPM4-205ENST00000586833 PCDHA8Q9Y5H6 950 aa16.15■□□□□ 0.18
TPM4-205ENST00000586833 FRMPD4Q14CM0 1322 aa16.15■□□□□ 0.18
TPM4-205ENST00000586833 KPNA6O60684 536 aa16.14■□□□□ 0.17
TPM4-205ENST00000586833 TRIM29Q14134 588 aa16.14■□□□□ 0.17
TPM4-205ENST00000586833 PKN1Q16512 942 aa16.14■□□□□ 0.17
TPM4-205ENST00000586833 UBE2SQ16763 222 aa16.14■□□□□ 0.17
TPM4-205ENST00000586833 ME3Q16798 604 aa16.14■□□□□ 0.17
TPM4-205ENST00000586833 UBE2Q1Q7Z7E8 422 aa16.14■□□□□ 0.17
TPM4-205ENST00000586833 REXO1Q8N1G1 1221 aaKnown RBP16.14■□□□□ 0.17
TPM4-205ENST00000586833 GLT1D1Q96MS3 346 aa16.14■□□□□ 0.17
TPM4-205ENST00000586833 SENP6Q9GZR1 1112 aaPredicted RBP16.14■□□□□ 0.17
TPM4-205ENST00000586833 PDGFCQ9NRA1 345 aa16.14■□□□□ 0.17
TPM4-205ENST00000586833 GNEQ9Y223 722 aaKnown RBP16.14■□□□□ 0.17
TPM4-205ENST00000586833 NR2E3Q9Y5X4 410 aa16.14■□□□□ 0.17
TPM4-205ENST00000586833 HTTP42858 3142 aa16.14■□□□□ 0.17
TPM4-205ENST00000586833 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.13■□□□□ 0.17
TPM4-205ENST00000586833 FIBPO43427 364 aa16.13■□□□□ 0.17
TPM4-205ENST00000586833 ADAMTS4O75173 837 aa16.13■□□□□ 0.17
TPM4-205ENST00000586833 GH1P01241 217 aa16.13■□□□□ 0.17
TPM4-205ENST00000586833 NKX3-2P78367 333 aa16.13■□□□□ 0.17
TPM4-205ENST00000586833 FSCN1Q16658 493 aaKnown RBP16.13■□□□□ 0.17
TPM4-205ENST00000586833 GIMAP8Q8ND71 665 aaPredicted RBP16.13■□□□□ 0.17
TPM4-205ENST00000586833 KLHDC9Q8NEP7 349 aa16.13■□□□□ 0.17
TPM4-205ENST00000586833 VTI1AQ96AJ9 217 aa16.13■□□□□ 0.17
TPM4-205ENST00000586833 LLPHQ9BRT6 129 aaKnown RBP16.13■□□□□ 0.17
TPM4-205ENST00000586833 SEZ6LQ9BYH1 1024 aa16.13■□□□□ 0.17
TPM4-205ENST00000586833 ANO3Q9BYT9 981 aa16.13■□□□□ 0.17
TPM4-205ENST00000586833 POLR3EQ9NVU0 708 aa16.13■□□□□ 0.17
TPM4-205ENST00000586833 VPS54Q9P1Q0 977 aa16.13■□□□□ 0.17
TPM4-205ENST00000586833 ORC3Q9UBD5 711 aaPredicted RBP16.13■□□□□ 0.17
TPM4-205ENST00000586833 PHF24Q9UPV7 400 aa16.13■□□□□ 0.17
TPM4-205ENST00000586833 KIF3AQ9Y496 699 aa16.13■□□□□ 0.17
TPM4-205ENST00000586833 MAFGO15525 162 aa16.12■□□□□ 0.17
TPM4-205ENST00000586833 EVI5O60447 810 aa16.12■□□□□ 0.17
TPM4-205ENST00000586833 COL6A1P12109 1028 aa16.12■□□□□ 0.17
TPM4-205ENST00000586833 ZNF76P36508 570 aa16.12■□□□□ 0.17
TPM4-205ENST00000586833 HMGN5P82970 282 aaKnown RBP16.12■□□□□ 0.17
TPM4-205ENST00000586833 LAMC2Q13753 1193 aa16.12■□□□□ 0.17
TPM4-205ENST00000586833 NEDD9Q14511 834 aa16.12■□□□□ 0.17
TPM4-205ENST00000586833 NECAB1Q8N987 351 aa16.12■□□□□ 0.17
TPM4-205ENST00000586833 DIS3LQ8TF46 1054 aaKnown RBP16.12■□□□□ 0.17
TPM4-205ENST00000586833 LENG1Q96BZ8 264 aaPredicted RBP16.12■□□□□ 0.17
TPM4-205ENST00000586833 KIF2CQ99661 725 aa16.12■□□□□ 0.17
TPM4-205ENST00000586833 STARD7Q9NQZ5 370 aa16.12■□□□□ 0.17
TPM4-205ENST00000586833 DDX49Q9Y6V7 483 aaKnown RBP16.12■□□□□ 0.17
TPM4-205ENST00000586833 DOCK3Q8IZD9 2030 aa16.11■□□□□ 0.17
TPM4-205ENST00000586833 ACLYP53396 1101 aa16.11■□□□□ 0.17
TPM4-205ENST00000586833 KCNA10Q16322 511 aa16.11■□□□□ 0.17
TPM4-205ENST00000586833 JAKMIP3Q5VZ66 844 aa16.11■□□□□ 0.17
TPM4-205ENST00000586833 TYW1BQ6NUM6 668 aa16.11■□□□□ 0.17
TPM4-205ENST00000586833 DHX37Q8IY37 1157 aaKnown RBP16.11■□□□□ 0.17
TPM4-205ENST00000586833 FAM184AQ8NB25 1140 aa16.11■□□□□ 0.17
TPM4-205ENST00000586833 GPRASP2Q96D09 838 aa16.11■□□□□ 0.17
TPM4-205ENST00000586833 MLXIPQ9HAP2 919 aa16.11■□□□□ 0.17
TPM4-205ENST00000586833 PCDHA4Q9UN74 947 aa16.11■□□□□ 0.17
TPM4-205ENST00000586833 PPFIA3O75145 1194 aa16.1■□□□□ 0.17
TPM4-205ENST00000586833 ASGR1P07306 291 aa16.1■□□□□ 0.17
TPM4-205ENST00000586833 ICAM3P32942 547 aa16.1■□□□□ 0.17
TPM4-205ENST00000586833 SREBF1P36956 1147 aa16.1■□□□□ 0.17
TPM4-205ENST00000586833 CCDC62Q6P9F0 684 aa16.1■□□□□ 0.17
TPM4-205ENST00000586833 CCDC83Q8IWF9 413 aa16.1■□□□□ 0.17
TPM4-205ENST00000586833 IL31RAQ8NI17 732 aa16.1■□□□□ 0.17
TPM4-205ENST00000586833 INPP4AQ96PE3 977 aaPredicted RBP16.1■□□□□ 0.17
TPM4-205ENST00000586833 ALG1Q9BT22 464 aa16.1■□□□□ 0.17
TPM4-205ENST00000586833 DDX41Q9UJV9 622 aaKnown RBP16.1■□□□□ 0.17
TPM4-205ENST00000586833 ELP1O95163 1332 aa16.1■□□□□ 0.17
TPM4-205ENST00000586833 MROH7Q68CQ1 1323 aa16.1■□□□□ 0.17
TPM4-205ENST00000586833 RBBP6Q7Z6E9 1792 aaKnown RBP16.1■□□□□ 0.17
TPM4-205ENST00000586833 A0A1W2PQ45 241 aaPredicted RBP16.09■□□□□ 0.17
TPM4-205ENST00000586833 A0A1W2PQY0 241 aa16.09■□□□□ 0.17
TPM4-205ENST00000586833 CLK2P49760 499 aaKnown RBP16.09■□□□□ 0.17
TPM4-205ENST00000586833 MNX1P50219 401 aaPredicted RBP16.09■□□□□ 0.17
TPM4-205ENST00000586833 MTMR1Q13613 665 aa16.09■□□□□ 0.17
TPM4-205ENST00000586833 SAFBQ15424 915 aaKnown RBP eCLIP16.09■□□□□ 0.17
TPM4-205ENST00000586833 LY6KQ17RY6 165 aa16.09■□□□□ 0.17
TPM4-205ENST00000586833 BLIDQ8IZY5 108 aa16.09■□□□□ 0.17
TPM4-205ENST00000586833 DAGLBQ8NCG7 672 aa16.09■□□□□ 0.17
TPM4-205ENST00000586833 NSUN7Q8NE18 718 aaKnown RBP16.09■□□□□ 0.17
TPM4-205ENST00000586833 EMID1Q96A84 441 aaPredicted RBP16.09■□□□□ 0.17
TPM4-205ENST00000586833 FERMT2Q96AC1 680 aa16.09■□□□□ 0.17
TPM4-205ENST00000586833 SENP7Q9BQF6 1050 aa16.09■□□□□ 0.17
TPM4-205ENST00000586833 RTEL1Q9NZ71 1219 aa16.09■□□□□ 0.17
TPM4-205ENST00000586833 PRKAG2Q9UGJ0 569 aa16.09■□□□□ 0.17
TPM4-205ENST00000586833 TCEAL9Q9UHQ7 104 aa16.09■□□□□ 0.17
TPM4-205ENST00000586833 A0A0U1RQG5 324 aaPredicted RBP16.08■□□□□ 0.16
TPM4-205ENST00000586833 SPATA31C2B4DYI2 1134 aa16.08■□□□□ 0.16
TPM4-205ENST00000586833 NOP56O00567 594 aaKnown RBP16.08■□□□□ 0.16
TPM4-205ENST00000586833 ADCY6O43306 1168 aa16.08■□□□□ 0.16
TPM4-205ENST00000586833 MYL3P08590 195 aa16.08■□□□□ 0.16
TPM4-205ENST00000586833 MRPS9P82933 396 aaKnown RBP16.08■□□□□ 0.16
TPM4-205ENST00000586833 ARHGAP4P98171 946 aa16.08■□□□□ 0.16
TPM4-205ENST00000586833 SETQ01105 290 aaPredicted RBP16.08■□□□□ 0.16
TPM4-205ENST00000586833 DGKDQ16760 1214 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms