RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 PHTF1Q9UMS5 762 aa8.1□□□□□ -1.11
TPM4-203ENST00000586193 BACE2Q9Y5Z0 518 aa8.1□□□□□ -1.11
TPM4-203ENST00000586193 H2AFYO75367 372 aaKnown RBP8.09□□□□□ -1.11
TPM4-203ENST00000586193 PLS3P13797 630 aa8.09□□□□□ -1.11
TPM4-203ENST00000586193 YBX3P16989 372 aaKnown RBP eCLIP8.09□□□□□ -1.11
TPM4-203ENST00000586193 HSPA6P17066 643 aa8.09□□□□□ -1.11
TPM4-203ENST00000586193 VCAM1P19320 739 aa8.09□□□□□ -1.11
TPM4-203ENST00000586193 TRAPPC10P48553 1259 aa8.09□□□□□ -1.11
TPM4-203ENST00000586193 ZNF280AP59817 542 aaPredicted RBP8.09□□□□□ -1.11
TPM4-203ENST00000586193 ST5P78524 1137 aa8.09□□□□□ -1.11
TPM4-203ENST00000586193 CLUL1Q15846 466 aa8.09□□□□□ -1.11
TPM4-203ENST00000586193 TMEM95Q3KNT9 176 aa8.09□□□□□ -1.11
TPM4-203ENST00000586193 FAM47CQ5HY64 1035 aa8.09□□□□□ -1.11
TPM4-203ENST00000586193 TRAPPC3LQ5T215 181 aa8.09□□□□□ -1.11
TPM4-203ENST00000586193 CWF19L1Q69YN2 538 aaKnown RBP8.09□□□□□ -1.11
TPM4-203ENST00000586193 CYB5RLQ6IPT4 315 aa8.09□□□□□ -1.11
TPM4-203ENST00000586193 CRTC3Q6UUV7 619 aa8.09□□□□□ -1.11
TPM4-203ENST00000586193 DTWD1Q8N5C7 304 aa8.09□□□□□ -1.11
TPM4-203ENST00000586193 C2orf69Q8N8R5 385 aa8.09□□□□□ -1.11
TPM4-203ENST00000586193 ENAHQ8N8S7 591 aaPredicted RBP8.09□□□□□ -1.11
TPM4-203ENST00000586193 GALNT6Q8NCL4 622 aa8.09□□□□□ -1.11
TPM4-203ENST00000586193 IPPKQ9H8X2 491 aa8.09□□□□□ -1.11
TPM4-203ENST00000586193 NMRK2Q9NPI5 230 aa8.09□□□□□ -1.11
TPM4-203ENST00000586193 DDX21Q9NR30 783 aaKnown RBP eCLIP8.09□□□□□ -1.11
TPM4-203ENST00000586193 CLEC1BQ9P126 229 aa8.09□□□□□ -1.11
TPM4-203ENST00000586193 SMARCA4P51532 1647 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 KLHL33A6NCF5 533 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 GOLGA8AA7E2F4 631 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 GOLGA8BA8MQT2 603 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 AP1G1O43747 822 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 MYL3P08590 195 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 IFNGR1P15260 489 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 RAB6AP20340 208 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 CTSKP43235 329 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 POU5F1BQ06416 359 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 ADCY1Q08828 1119 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 ACAP2Q15057 778 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 TESK1Q15569 626 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 IFIT1BQ5T764 474 aaKnown RBP8.08□□□□□ -1.12
TPM4-203ENST00000586193 ANO1Q5XXA6 986 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 FDX2Q6P4F2 183 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 TOGARAM2Q6ZUX3 1019 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 FBXO11Q86XK2 927 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 AMOTL1Q8IY63 956 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 EFHBQ8N7U6 833 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 SLC35G2Q8TBE7 412 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 FBXW5Q969U6 566 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 ACDQ96AP0 544 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 C1orf112Q9NSG2 853 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 INVSQ9Y283 1065 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 DAGLAQ9Y4D2 1042 aa8.08□□□□□ -1.12
TPM4-203ENST00000586193 CTNND1O60716 968 aaKnown RBP8.07□□□□□ -1.12
TPM4-203ENST00000586193 KRT37O76014 449 aa8.07□□□□□ -1.12
TPM4-203ENST00000586193 ZRANB2O95218 330 aaKnown RBP eCLIP8.07□□□□□ -1.12
TPM4-203ENST00000586193 GSNP06396 782 aa8.07□□□□□ -1.12
TPM4-203ENST00000586193 CD53P19397 219 aa8.07□□□□□ -1.12
TPM4-203ENST00000586193 SEPHS1P49903 392 aa8.07□□□□□ -1.12
TPM4-203ENST00000586193 NMIQ13287 307 aaPredicted RBP8.07□□□□□ -1.12
TPM4-203ENST00000586193 KIZQ2M2Z5 673 aa8.07□□□□□ -1.12
TPM4-203ENST00000586193 RRP12Q5JTH9 1297 aaKnown RBP8.07□□□□□ -1.12
TPM4-203ENST00000586193 RNFT1Q5M7Z0 435 aa8.07□□□□□ -1.12
TPM4-203ENST00000586193 E4F1Q66K89 784 aaPredicted RBP8.07□□□□□ -1.12
TPM4-203ENST00000586193 B3GNT9Q6UX72 402 aa8.07□□□□□ -1.12
TPM4-203ENST00000586193 CLEC4GQ6UXB4 293 aa8.07□□□□□ -1.12
TPM4-203ENST00000586193 SKAP1Q86WV1 359 aa8.07□□□□□ -1.12
TPM4-203ENST00000586193 RCBTB1Q8NDN9 531 aa8.07□□□□□ -1.12
TPM4-203ENST00000586193 GJA10Q969M2 543 aa8.07□□□□□ -1.12
TPM4-203ENST00000586193 TEKT5Q96M29 485 aa8.07□□□□□ -1.12
TPM4-203ENST00000586193 FCRL3Q96P31 734 aaPredicted RBP8.07□□□□□ -1.12
TPM4-203ENST00000586193 PLCB1Q9NQ66 1216 aa8.07□□□□□ -1.12
TPM4-203ENST00000586193 CASS4Q9NQ75 786 aa8.07□□□□□ -1.12
TPM4-203ENST00000586193 PRDM10Q9NQV6 1147 aa8.07□□□□□ -1.12
TPM4-203ENST00000586193 TOPORSQ9NS56 1045 aaPredicted RBP8.07□□□□□ -1.12
TPM4-203ENST00000586193 TPX2Q9ULW0 747 aaKnown RBP8.07□□□□□ -1.12
TPM4-203ENST00000586193 NCAPD3P42695 1498 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 ATAD2BQ9ULI0 1458 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 CNTNAP4Q9C0A0 1308 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.06□□□□□ -1.12
TPM4-203ENST00000586193 TRIM75PA6NK02 468 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 GSTA4O15217 222 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 MYBP10242 640 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 GPR3P46089 330 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 KCNAB2Q13303 367 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 ZNF267Q14586 743 aaPredicted RBP8.06□□□□□ -1.12
TPM4-203ENST00000586193 TERF2Q15554 542 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 ARHGAP44Q17R89 818 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 C1orf228Q6PIY5 440 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 C16orf59Q7L2K0 433 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 PAF1Q8N7H5 531 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 ANKRD42Q8N9B4 389 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 MS4A5Q9H3V2 200 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 ACSS3Q9H6R3 686 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 CATSPERZQ9NTU4 200 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 PPARGC1AQ9UBK2 798 aaKnown RBP8.06□□□□□ -1.12
TPM4-203ENST00000586193 CBLCQ9ULV8 474 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 DNM3Q9UQ16 869 aa8.06□□□□□ -1.12
TPM4-203ENST00000586193 NOC2LQ9Y3T9 749 aaKnown RBP8.06□□□□□ -1.12
TPM4-203ENST00000586193 SMARCA2P51531 1590 aa8.05□□□□□ -1.12
TPM4-203ENST00000586193 WNT9AO14904 365 aa8.05□□□□□ -1.12
TPM4-203ENST00000586193 CYP7A1P22680 504 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms