RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 JMJD4Q9H9V9 463 aa16.92■□□□□ 0.3
SDF2-202ENST00000585428 CERS4Q9HA82 394 aa16.92■□□□□ 0.3
SDF2-202ENST00000585428 TRANK1O15050 2925 aa16.92■□□□□ 0.3
SDF2-202ENST00000585428 SCN10AQ9Y5Y9 1956 aa16.91■□□□□ 0.3
SDF2-202ENST00000585428 RBL2Q08999 1139 aa16.91■□□□□ 0.3
SDF2-202ENST00000585428 AAMPQ13685 434 aa16.91■□□□□ 0.3
SDF2-202ENST00000585428 AAK1Q2M2I8 961 aa16.91■□□□□ 0.3
SDF2-202ENST00000585428 QRICH1Q2TAL8 776 aa16.91■□□□□ 0.3
SDF2-202ENST00000585428 ASPRV1Q53RT3 343 aa16.91■□□□□ 0.3
SDF2-202ENST00000585428 ENAHQ8N8S7 591 aaPredicted RBP16.91■□□□□ 0.3
SDF2-202ENST00000585428 AFAP1L1Q8TED9 768 aa16.91■□□□□ 0.3
SDF2-202ENST00000585428 DHX38Q92620 1227 aaKnown RBP16.91■□□□□ 0.3
SDF2-202ENST00000585428 EMID1Q96A84 441 aaPredicted RBP16.91■□□□□ 0.3
SDF2-202ENST00000585428 NOD1Q9Y239 953 aa16.91■□□□□ 0.3
SDF2-202ENST00000585428 MRPL11Q9Y3B7 192 aaKnown RBP16.91■□□□□ 0.3
SDF2-202ENST00000585428 B4E1Z4 1266 aa16.9■□□□□ 0.3
SDF2-202ENST00000585428 PARNO95453 639 aaKnown RBP16.9■□□□□ 0.3
SDF2-202ENST00000585428 CXCL10P02778 98 aa16.9■□□□□ 0.3
SDF2-202ENST00000585428 NR3C2P08235 984 aa16.9■□□□□ 0.3
SDF2-202ENST00000585428 SELPP16109 830 aa16.9■□□□□ 0.3
SDF2-202ENST00000585428 CHMP4BP1P59074 171 aa16.9■□□□□ 0.3
SDF2-202ENST00000585428 DGKDQ16760 1214 aa16.9■□□□□ 0.3
SDF2-202ENST00000585428 KRT40Q6A162 431 aa16.9■□□□□ 0.3
SDF2-202ENST00000585428 CWC27Q6UX04 472 aaKnown RBP16.9■□□□□ 0.3
SDF2-202ENST00000585428 CHD1LQ86WJ1 897 aa16.9■□□□□ 0.3
SDF2-202ENST00000585428 FBXO11Q86XK2 927 aa16.9■□□□□ 0.3
SDF2-202ENST00000585428 MICALL1Q8N3F8 863 aa16.9■□□□□ 0.3
SDF2-202ENST00000585428 DSCC1Q9BVC3 393 aa16.9■□□□□ 0.3
SDF2-202ENST00000585428 RWDD1Q9H446 243 aaPredicted RBP16.9■□□□□ 0.3
SDF2-202ENST00000585428 VAT1LQ9HCJ6 419 aa16.9■□□□□ 0.3
SDF2-202ENST00000585428 HDAC6Q9UBN7 1215 aa16.9■□□□□ 0.3
SDF2-202ENST00000585428 GTF2IRD1Q9UHL9 959 aa16.9■□□□□ 0.3
SDF2-202ENST00000585428 HAS3O00219 553 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 OPLAHO14841 1288 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 GTPBP6O43824 516 aaPredicted RBP16.89■□□□□ 0.29
SDF2-202ENST00000585428 LPXNO60711 386 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 NBNO60934 754 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 IGHDP01880 384 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 CKBP12277 381 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 HSD17B4P51659 736 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 GHRHRQ02643 423 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 NUCB1Q02818 461 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 LAMC2Q13753 1193 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 ARHGEF16Q5VV41 709 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 B4GALNT3Q6L9W6 998 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 CHST3Q7LGC8 479 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 CCDC155Q8N6L0 562 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 IL27Q8NEV9 243 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 ARNTL2Q8WYA1 636 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 MTMR8Q96EF0 704 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 NECAB3Q96P71 396 aaPredicted RBP16.89■□□□□ 0.29
SDF2-202ENST00000585428 PXMP2Q9NR77 195 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 MYO9BQ13459 2157 aa16.89■□□□□ 0.29
SDF2-202ENST00000585428 TLL1O43897 1013 aa16.88■□□□□ 0.29
SDF2-202ENST00000585428 PPFIA4O75335 1185 aa16.88■□□□□ 0.29
SDF2-202ENST00000585428 RGS20O76081 388 aa16.88■□□□□ 0.29
SDF2-202ENST00000585428 PARP1P09874 1014 aaKnown RBP16.88■□□□□ 0.29
SDF2-202ENST00000585428 KCNQ1P51787 676 aa16.88■□□□□ 0.29
SDF2-202ENST00000585428 WDR5P61964 334 aaKnown RBP16.88■□□□□ 0.29
SDF2-202ENST00000585428 TCTN1Q2MV58 587 aa16.88■□□□□ 0.29
SDF2-202ENST00000585428 TRAF7Q6Q0C0 670 aa16.88■□□□□ 0.29
SDF2-202ENST00000585428 STOX1Q6ZVD7 989 aa16.88■□□□□ 0.29
SDF2-202ENST00000585428 LRRC8DQ7L1W4 858 aa16.88■□□□□ 0.29
SDF2-202ENST00000585428 STAG2Q8N3U4 1231 aa16.88■□□□□ 0.29
SDF2-202ENST00000585428 PPTC7Q8NI37 304 aa16.88■□□□□ 0.29
SDF2-202ENST00000585428 MAP3K20Q9NYL2 800 aaKnown RBP16.88■□□□□ 0.29
SDF2-202ENST00000585428 COG5Q9UP83 839 aa16.88■□□□□ 0.29
SDF2-202ENST00000585428 GBF1Q92538 1859 aa16.87■□□□□ 0.29
SDF2-202ENST00000585428 ABHD14A-ACY1A0A1B0GW23 586 aa16.87■□□□□ 0.29
SDF2-202ENST00000585428 HOXD8P13378 290 aaPredicted RBP16.87■□□□□ 0.29
SDF2-202ENST00000585428 EIF2AK2P19525 551 aaKnown RBP16.87■□□□□ 0.29
SDF2-202ENST00000585428 PSEN2P49810 448 aa16.87■□□□□ 0.29
SDF2-202ENST00000585428 PTK7Q13308 1070 aa16.87■□□□□ 0.29
SDF2-202ENST00000585428 GRB10Q13322 594 aa16.87■□□□□ 0.29
SDF2-202ENST00000585428 SKIV2LQ15477 1246 aaKnown RBP16.87■□□□□ 0.29
SDF2-202ENST00000585428 TRIM71Q2Q1W2 868 aaKnown RBP16.87■□□□□ 0.29
SDF2-202ENST00000585428 CNKSR3Q6P9H4 555 aa16.87■□□□□ 0.29
SDF2-202ENST00000585428 SPRED2Q7Z698 418 aa16.87■□□□□ 0.29
SDF2-202ENST00000585428 VSIG10LQ86VR7 867 aa16.87■□□□□ 0.29
SDF2-202ENST00000585428 C7orf31Q8N865 590 aa16.87■□□□□ 0.29
SDF2-202ENST00000585428 AMNQ9BXJ7 453 aa16.87■□□□□ 0.29
SDF2-202ENST00000585428 KRT23Q9C075 422 aa16.87■□□□□ 0.29
SDF2-202ENST00000585428 LMCD1Q9NZU5 365 aa16.87■□□□□ 0.29
SDF2-202ENST00000585428 CTNNA3Q9UI47 895 aa16.87■□□□□ 0.29
SDF2-202ENST00000585428 SCN5AQ14524 2016 aa16.86■□□□□ 0.29
SDF2-202ENST00000585428 LCHNA4D1U4 455 aa16.86■□□□□ 0.29
SDF2-202ENST00000585428 HIP1O00291 1037 aa16.86■□□□□ 0.29
SDF2-202ENST00000585428 PPP1R11O60927 126 aaPredicted RBP16.86■□□□□ 0.29
SDF2-202ENST00000585428 F2P00734 622 aa16.86■□□□□ 0.29
SDF2-202ENST00000585428 CFBP00751 764 aa16.86■□□□□ 0.29
SDF2-202ENST00000585428 KCNJ6P48051 423 aa16.86■□□□□ 0.29
SDF2-202ENST00000585428 SEC23AQ15436 765 aa16.86■□□□□ 0.29
SDF2-202ENST00000585428 IMMTQ16891 758 aaKnown RBP16.86■□□□□ 0.29
SDF2-202ENST00000585428 MYSM1Q5VVJ2 828 aa16.86■□□□□ 0.29
SDF2-202ENST00000585428 TMCO2Q7Z6W1 182 aaPredicted RBP16.86■□□□□ 0.29
SDF2-202ENST00000585428 DHX37Q8IY37 1157 aaKnown RBP16.86■□□□□ 0.29
SDF2-202ENST00000585428 SAMD3Q8N6K7 520 aa16.86■□□□□ 0.29
SDF2-202ENST00000585428 RAD9AQ99638 391 aa16.86■□□□□ 0.29
SDF2-202ENST00000585428 KATNAL1Q9BW62 490 aa16.86■□□□□ 0.29
SDF2-202ENST00000585428 CNNM2Q9H8M5 875 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms