RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 GPR101Q96P66 508 aaPredicted RBP15.76■□□□□ 0.11
CDK5RAP3-237ENST00000585163 UBA5Q9GZZ9 404 aa15.76■□□□□ 0.11
CDK5RAP3-237ENST00000585163 SLC37A4O43826 429 aa15.76■□□□□ 0.11
CDK5RAP3-237ENST00000585163 EDIL3O43854 480 aa15.76■□□□□ 0.11
CDK5RAP3-237ENST00000585163 EIF4A3P38919 411 aaKnown RBP15.76■□□□□ 0.11
CDK5RAP3-237ENST00000585163 EHHADHQ08426 723 aa15.76■□□□□ 0.11
CDK5RAP3-237ENST00000585163 C2orf54Q08AI8 447 aa15.76■□□□□ 0.11
CDK5RAP3-237ENST00000585163 DYMQ7RTS9 669 aa15.76■□□□□ 0.11
CDK5RAP3-237ENST00000585163 CDK5RAP3Q96JB5 506 aa15.76■□□□□ 0.11
CDK5RAP3-237ENST00000585163 SELENOOQ9BVL4 669 aa15.76■□□□□ 0.11
CDK5RAP3-237ENST00000585163 RAB34Q9BZG1 259 aa15.76■□□□□ 0.11
CDK5RAP3-237ENST00000585163 PDHBP11177 359 aa15.75■□□□□ 0.11
CDK5RAP3-237ENST00000585163 RHBDL3P58872 404 aa15.75■□□□□ 0.11
CDK5RAP3-237ENST00000585163 FOXR2Q6PJQ5 311 aa15.75■□□□□ 0.11
CDK5RAP3-237ENST00000585163 LRRC55Q6ZSA7 311 aa15.75■□□□□ 0.11
CDK5RAP3-237ENST00000585163 RAD54LQ92698 747 aa15.75■□□□□ 0.11
CDK5RAP3-237ENST00000585163 MMRN2Q9H8L6 949 aa15.75■□□□□ 0.11
CDK5RAP3-237ENST00000585163 CD209Q9NNX6 404 aa15.75■□□□□ 0.11
CDK5RAP3-237ENST00000585163 LRRC53A6NM62 1247 aa15.75■□□□□ 0.11
CDK5RAP3-237ENST00000585163 TDP2O95551 362 aa15.75■□□□□ 0.11
CDK5RAP3-237ENST00000585163 CCDC70Q6NSX1 233 aa15.75■□□□□ 0.11
CDK5RAP3-237ENST00000585163 BAP1Q92560 729 aa15.75■□□□□ 0.11
CDK5RAP3-237ENST00000585163 DEF6Q9H4E7 631 aa15.75■□□□□ 0.11
CDK5RAP3-237ENST00000585163 MLXIPQ9HAP2 919 aa15.75■□□□□ 0.11
CDK5RAP3-237ENST00000585163 POTEMA6NI47 508 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 AKR1B10O60218 316 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 MOCS3O95396 460 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 ADCY7P51828 1080 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 SLC20A2Q08357 652 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 PSMD2Q13200 908 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 RRAGAQ7L523 313 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 GSPT2Q8IYD1 628 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 GOLGA6L1Q8N7Z2 621 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 AFAP1L1Q8TED9 768 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 AENQ8WTP8 325 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 RUBCNQ92622 972 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 FAM163AQ96GL9 167 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 GDAP1L1Q96MZ0 367 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 FEZ2Q9UHY8 353 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 PJA2O43164 708 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 IL1R1P14778 569 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 GGCXP38435 758 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 ASTE1Q2TB18 679 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 SRLQ86TD4 932 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 DDX12PQ92771 950 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 COA7Q96BR5 231 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 NUDT12Q9BQG2 462 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 CRACR2AQ9BSW2 395 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 EDEM3Q9BZQ6 932 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 LRRC27Q9C0I9 530 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 RIC8AQ9NPQ8 531 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 FAM184BQ9ULE4 1060 aa15.74■□□□□ 0.11
CDK5RAP3-237ENST00000585163 AGPSO00116 658 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 TCP1P17987 556 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 GPSM2P81274 684 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 TMEM119Q4V9L6 283 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 KRT79Q5XKE5 535 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 SPATA4Q8NEY3 305 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 SNX29Q8TEQ0 813 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 ALS2CR12Q96Q35 445 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 OSBPL9Q96SU4 736 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 LCMT1Q9UIC8 334 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 FRMPD2Q68DX3 1309 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 PLIN4Q96Q06 1357 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 MYO1CO00159 1063 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 ASPRV1Q53RT3 343 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 LRRC31Q6UY01 552 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 ARHGAP27Q6ZUM4 889 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 KCNK18Q7Z418 384 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 CNPY4Q8N129 248 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 PROM2Q8N271 834 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 RIN2Q8WYP3 895 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 MTMR4Q9NYA4 1195 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 CCNL1Q9UK58 526 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 HYOU1Q9Y4L1 999 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 MYH10P35580 1976 aa15.73■□□□□ 0.11
CDK5RAP3-237ENST00000585163 SNHG28P0DPA3 235 aa15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 MAGEA1P43355 309 aa15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 MAPK8IP2Q13387 824 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 PPP4R3AQ6IN85 833 aa15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 PDXDC1Q6P996 788 aa15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 DRC1Q96MC2 740 aa15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 TSG101Q99816 390 aa15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 LRRC1Q9BTT6 524 aa15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 GAKO14976 1311 aa15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 NHSQ6T4R5 1651 aa15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 BTAF1O14981 1849 aa15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 SSU72P8A0A1W2PR75 194 aa15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 UFL1O94874 794 aa15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 ZCWPW2Q504Y3 356 aa15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 CNBD1Q8NA66 436 aa15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 GLIS3Q8NEA6 775 aa15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 HDAC7Q8WUI4 952 aa15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 DMGDHQ9UI17 866 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 SALL4Q9UJQ4 1053 aa15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 RRP15Q9Y3B9 282 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-237ENST00000585163 KCNMA1Q12791 1236 aa15.71■□□□□ 0.11
CDK5RAP3-237ENST00000585163 LRRC41Q15345 812 aa15.71■□□□□ 0.11
CDK5RAP3-237ENST00000585163 EZH2Q15910 746 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-237ENST00000585163 MFSD14BQ5SR56 506 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms