RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 PRDM12Q9H4Q4 367 aa23.72■■□□□ 1.39
TOP3A-219ENST00000584887 A0A0C4DFX4 3053 aa23.72■■□□□ 1.39
TOP3A-219ENST00000584887 KIAA1217Q5T5P2 1943 aa23.71■■□□□ 1.39
TOP3A-219ENST00000584887 RABGGTBP53611 331 aa23.71■■□□□ 1.39
TOP3A-219ENST00000584887 SLC35G1Q2M3R5 365 aa23.71■■□□□ 1.39
TOP3A-219ENST00000584887 GAS2L1Q99501 681 aaPredicted RBP23.71■■□□□ 1.39
TOP3A-219ENST00000584887 SORBS3O60504 671 aa23.7■■□□□ 1.38
TOP3A-219ENST00000584887 CASTP20810 708 aaKnown RBP23.7■■□□□ 1.38
TOP3A-219ENST00000584887 PTPN11Q06124 597 aaPredicted RBP23.7■■□□□ 1.38
TOP3A-219ENST00000584887 CATIPQ7Z7H3 387 aa23.7■■□□□ 1.38
TOP3A-219ENST00000584887 FCHSD1Q86WN1 690 aa23.7■■□□□ 1.38
TOP3A-219ENST00000584887 PDCD2LQ9BRP1 358 aa23.7■■□□□ 1.38
TOP3A-219ENST00000584887 COL25A1Q9BXS0 654 aaPredicted RBP23.7■■□□□ 1.38
TOP3A-219ENST00000584887 DDX41Q9UJV9 622 aaKnown RBP23.7■■□□□ 1.38
TOP3A-219ENST00000584887 YBX2Q9Y2T7 364 aaKnown RBP23.7■■□□□ 1.38
TOP3A-219ENST00000584887 RBM8AQ9Y5S9 174 aaKnown RBP23.7■■□□□ 1.38
TOP3A-219ENST00000584887 SCN5AQ14524 2016 aa23.69■■□□□ 1.38
TOP3A-219ENST00000584887 GCOM1H8Y6P7 765 aaPredicted RBP23.69■■□□□ 1.38
TOP3A-219ENST00000584887 PFKMP08237 780 aa23.69■■□□□ 1.38
TOP3A-219ENST00000584887 POLR2MP0CAP2 368 aa23.69■■□□□ 1.38
TOP3A-219ENST00000584887 TRAF1Q13077 416 aa23.69■■□□□ 1.38
TOP3A-219ENST00000584887 BFSP2Q13515 415 aa23.69■■□□□ 1.38
TOP3A-219ENST00000584887 PTGISQ16647 500 aa23.69■■□□□ 1.38
TOP3A-219ENST00000584887 DGKDQ16760 1214 aa23.69■■□□□ 1.38
TOP3A-219ENST00000584887 PPM1EQ8WY54 764 aa23.69■■□□□ 1.38
TOP3A-219ENST00000584887 VWCEQ96DN2 955 aa23.69■■□□□ 1.38
TOP3A-219ENST00000584887 FTOQ9C0B1 505 aaKnown RBP eCLIP23.69■■□□□ 1.38
TOP3A-219ENST00000584887 SLC28A3Q9HAS3 691 aa23.69■■□□□ 1.38
TOP3A-219ENST00000584887 ZNF286BP0CG31 522 aa23.68■■□□□ 1.38
TOP3A-219ENST00000584887 ACTN1P12814 892 aa23.68■■□□□ 1.38
TOP3A-219ENST00000584887 ATP2A2P16615 1042 aaKnown RBP23.68■■□□□ 1.38
TOP3A-219ENST00000584887 ANTXR2P58335 489 aa23.68■■□□□ 1.38
TOP3A-219ENST00000584887 DHX37Q8IY37 1157 aaKnown RBP23.68■■□□□ 1.38
TOP3A-219ENST00000584887 IL31RAQ8NI17 732 aa23.68■■□□□ 1.38
TOP3A-219ENST00000584887 ZFP91Q96JP5 570 aaPredicted RBP23.68■■□□□ 1.38
TOP3A-219ENST00000584887 ALG1Q9BT22 464 aa23.68■■□□□ 1.38
TOP3A-219ENST00000584887 RIOX1Q9H6W3 641 aa23.68■■□□□ 1.38
TOP3A-219ENST00000584887 GBF1Q92538 1859 aa23.67■■□□□ 1.38
TOP3A-219ENST00000584887 PITPNM1O00562 1244 aa23.67■■□□□ 1.38
TOP3A-219ENST00000584887 CYTH3O43739 400 aa23.67■■□□□ 1.38
TOP3A-219ENST00000584887 TROAPQ12815 778 aa23.67■■□□□ 1.38
TOP3A-219ENST00000584887 LAMC2Q13753 1193 aa23.67■■□□□ 1.38
TOP3A-219ENST00000584887 PGM5Q15124 567 aa23.67■■□□□ 1.38
TOP3A-219ENST00000584887 GDF6Q6KF10 455 aaPredicted RBP23.67■■□□□ 1.38
TOP3A-219ENST00000584887 MB21D2Q8IYB1 491 aaPredicted RBP23.67■■□□□ 1.38
TOP3A-219ENST00000584887 CCDC155Q8N6L0 562 aa23.67■■□□□ 1.38
TOP3A-219ENST00000584887 USP38Q8NB14 1042 aa23.67■■□□□ 1.38
TOP3A-219ENST00000584887 KAT2BQ92831 832 aa23.67■■□□□ 1.38
TOP3A-219ENST00000584887 MAP4K1Q92918 833 aa23.67■■□□□ 1.38
TOP3A-219ENST00000584887 MYL10Q9BUA6 226 aa23.67■■□□□ 1.38
TOP3A-219ENST00000584887 MAP3K20Q9NYL2 800 aaKnown RBP23.67■■□□□ 1.38
TOP3A-219ENST00000584887 PNMA6FA0A0J9YX94 578 aa23.66■■□□□ 1.38
TOP3A-219ENST00000584887 IQCF3P0C7M6 154 aa23.66■■□□□ 1.38
TOP3A-219ENST00000584887 MYOGP15173 224 aa23.66■■□□□ 1.38
TOP3A-219ENST00000584887 CCND2P30279 289 aa23.66■■□□□ 1.38
TOP3A-219ENST00000584887 RFC2P35250 354 aa23.66■■□□□ 1.38
TOP3A-219ENST00000584887 PSEN2P49810 448 aa23.66■■□□□ 1.38
TOP3A-219ENST00000584887 GHRHRQ02643 423 aa23.66■■□□□ 1.38
TOP3A-219ENST00000584887 PPP2R2DQ66LE6 453 aa23.66■■□□□ 1.38
TOP3A-219ENST00000584887 CASC1Q6TDU7 716 aa23.66■■□□□ 1.38
TOP3A-219ENST00000584887 C7orf31Q8N865 590 aa23.66■■□□□ 1.38
TOP3A-219ENST00000584887 IGFBP4P22692 258 aa23.65■■□□□ 1.38
TOP3A-219ENST00000584887 MFSD10Q14728 455 aa23.65■■□□□ 1.38
TOP3A-219ENST00000584887 NFXL1Q6ZNB6 911 aa23.65■■□□□ 1.38
TOP3A-219ENST00000584887 SAMD3Q8N6K7 520 aa23.65■■□□□ 1.38
TOP3A-219ENST00000584887 PPTC7Q8NI37 304 aa23.65■■□□□ 1.38
TOP3A-219ENST00000584887 CTCFLQ8NI51 663 aaPredicted RBP23.65■■□□□ 1.38
TOP3A-219ENST00000584887 EMID1Q96A84 441 aaPredicted RBP23.65■■□□□ 1.38
TOP3A-219ENST00000584887 RGS20O76081 388 aa23.64■■□□□ 1.37
TOP3A-219ENST00000584887 GGPS1O95749 300 aa23.64■■□□□ 1.37
TOP3A-219ENST00000584887 VSIG10LQ86VR7 867 aa23.64■■□□□ 1.37
TOP3A-219ENST00000584887 ZNF654Q8IZM8 581 aa23.64■■□□□ 1.37
TOP3A-219ENST00000584887 IGDCC4Q8TDY8 1250 aa23.64■■□□□ 1.37
TOP3A-219ENST00000584887 SPATA33Q96N06 139 aa23.64■■□□□ 1.37
TOP3A-219ENST00000584887 KATNAL1Q9BW62 490 aa23.64■■□□□ 1.37
TOP3A-219ENST00000584887 HDAC6Q9UBN7 1215 aa23.64■■□□□ 1.37
TOP3A-219ENST00000584887 PCDHA11Q9Y5I1 949 aa23.64■■□□□ 1.37
TOP3A-219ENST00000584887 MYH7BA7E2Y1 1941 aa23.64■■□□□ 1.37
TOP3A-219ENST00000584887 TANC1Q9C0D5 1861 aa23.64■■□□□ 1.37
TOP3A-219ENST00000584887 TRIP12Q14669 1992 aaPredicted RBP23.63■■□□□ 1.37
TOP3A-219ENST00000584887 PRC1O43663 620 aa23.63■■□□□ 1.37
TOP3A-219ENST00000584887 KIAA0753Q2KHM9 967 aa23.63■■□□□ 1.37
TOP3A-219ENST00000584887 KCNV1Q6PIU1 500 aa23.63■■□□□ 1.37
TOP3A-219ENST00000584887 SESTD1Q86VW0 696 aa23.63■■□□□ 1.37
TOP3A-219ENST00000584887 CAGE1Q8TC20 777 aa23.63■■□□□ 1.37
TOP3A-219ENST00000584887 LY9Q9HBG7 655 aa23.63■■□□□ 1.37
TOP3A-219ENST00000584887 DDAH1O94760 285 aa23.62■■□□□ 1.37
TOP3A-219ENST00000584887 UBA1P22314 1058 aaKnown RBP23.62■■□□□ 1.37
TOP3A-219ENST00000584887 KIF5BP33176 963 aa23.62■■□□□ 1.37
TOP3A-219ENST00000584887 CELF3Q5SZQ8 465 aaKnown RBP23.62■■□□□ 1.37
TOP3A-219ENST00000584887 AFAP1L1Q8TED9 768 aa23.62■■□□□ 1.37
TOP3A-219ENST00000584887 DHX38Q92620 1227 aaKnown RBP23.62■■□□□ 1.37
TOP3A-219ENST00000584887 GPKOWQ92917 476 aaPredicted RBP eCLIP23.62■■□□□ 1.37
TOP3A-219ENST00000584887 RRP36Q96EU6 259 aaKnown RBP23.62■■□□□ 1.37
TOP3A-219ENST00000584887 CTAGE1Q96RT6 745 aa23.62■■□□□ 1.37
TOP3A-219ENST00000584887 MLXIPQ9HAP2 919 aa23.62■■□□□ 1.37
TOP3A-219ENST00000584887 GTF2IRD1Q9UHL9 959 aa23.62■■□□□ 1.37
TOP3A-219ENST00000584887 TET1Q8NFU7 2136 aa23.62■■□□□ 1.37
TOP3A-219ENST00000584887 F2P00734 622 aa23.61■■□□□ 1.37
TOP3A-219ENST00000584887 SELPP16109 830 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms