RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 FAM217BQ9NTX9 383 aaPredicted RBP23.96■■□□□ 1.43
TOP3A-218ENST00000584669 RBM28Q9NW13 759 aaKnown RBP23.96■■□□□ 1.43
TOP3A-218ENST00000584669 MAP3K20Q9NYL2 800 aaKnown RBP23.96■■□□□ 1.43
TOP3A-218ENST00000584669 GCOM1H8Y6P7 765 aaPredicted RBP23.95■■□□□ 1.42
TOP3A-218ENST00000584669 POLR2MP0CAP2 368 aa23.95■■□□□ 1.42
TOP3A-218ENST00000584669 NKX3-2P78367 333 aa23.95■■□□□ 1.42
TOP3A-218ENST00000584669 SMAD3P84022 425 aaKnown RBP23.95■■□□□ 1.42
TOP3A-218ENST00000584669 DUSP28Q4G0W2 176 aa23.95■■□□□ 1.42
TOP3A-218ENST00000584669 FCHSD1Q86WN1 690 aa23.95■■□□□ 1.42
TOP3A-218ENST00000584669 FAM126BQ8IXS8 530 aa23.95■■□□□ 1.42
TOP3A-218ENST00000584669 SAMD3Q8N6K7 520 aa23.95■■□□□ 1.42
TOP3A-218ENST00000584669 IWS1Q96ST2 819 aa23.95■■□□□ 1.42
TOP3A-218ENST00000584669 ZSWIM6Q9HCJ5 1215 aa23.95■■□□□ 1.42
TOP3A-218ENST00000584669 CABYRO75952 493 aa23.94■■□□□ 1.42
TOP3A-218ENST00000584669 FUT2Q10981 343 aa23.94■■□□□ 1.42
TOP3A-218ENST00000584669 RUFY3Q7L099 469 aa23.94■■□□□ 1.42
TOP3A-218ENST00000584669 AGXT2Q9BYV1 514 aa23.94■■□□□ 1.42
TOP3A-218ENST00000584669 ARIH2O95376 493 aa23.93■■□□□ 1.42
TOP3A-218ENST00000584669 NR3C2P08235 984 aa23.93■■□□□ 1.42
TOP3A-218ENST00000584669 PPIGQ13427 754 aaKnown RBP eCLIP23.93■■□□□ 1.429e-7■■■■□ 20.6
TOP3A-218ENST00000584669 STXBP2Q15833 593 aa23.93■■□□□ 1.42
TOP3A-218ENST00000584669 MFSD5Q6N075 450 aa23.93■■□□□ 1.42
TOP3A-218ENST00000584669 FBXL16Q8N461 479 aa23.93■■□□□ 1.42
TOP3A-218ENST00000584669 SCFD2Q8WU76 684 aa23.93■■□□□ 1.42
TOP3A-218ENST00000584669 COPS5Q92905 334 aa23.93■■□□□ 1.42
TOP3A-218ENST00000584669 GPKOWQ92917 476 aaPredicted RBP eCLIP23.93■■□□□ 1.42
TOP3A-218ENST00000584669 Q9Y3F1 56 aa23.93■■□□□ 1.42
TOP3A-218ENST00000584669 METAP2P50579 478 aaKnown RBP eCLIP23.92■■□□□ 1.42
TOP3A-218ENST00000584669 RCAN1P53805 252 aa23.92■■□□□ 1.42
TOP3A-218ENST00000584669 PSMC6P62333 389 aa23.92■■□□□ 1.42
TOP3A-218ENST00000584669 ITGA7Q13683 1181 aa23.92■■□□□ 1.42
TOP3A-218ENST00000584669 PPP2R5BQ15173 497 aa23.92■■□□□ 1.42
TOP3A-218ENST00000584669 SEPT14Q6ZU15 432 aa23.92■■□□□ 1.42
TOP3A-218ENST00000584669 IL31RAQ8NI17 732 aa23.92■■□□□ 1.42
TOP3A-218ENST00000584669 PDCD2LQ9BRP1 358 aa23.92■■□□□ 1.42
TOP3A-218ENST00000584669 UPF3BQ9BZI7 483 aaKnown RBP23.92■■□□□ 1.42
TOP3A-218ENST00000584669 MYCLP12524 364 aaPredicted RBP23.91■■□□□ 1.42
TOP3A-218ENST00000584669 CSF2RAP15509 400 aa23.91■■□□□ 1.42
TOP3A-218ENST00000584669 CYP2C18P33260 490 aa23.91■■□□□ 1.42
TOP3A-218ENST00000584669 ADD1P35611 737 aaKnown RBP23.91■■□□□ 1.42
TOP3A-218ENST00000584669 TOB2Q14106 344 aaPredicted RBP23.91■■□□□ 1.42
TOP3A-218ENST00000584669 PGM5Q15124 567 aa23.91■■□□□ 1.42
TOP3A-218ENST00000584669 USP17L6PQ6QN14 398 aa23.91■■□□□ 1.42
TOP3A-218ENST00000584669 TMEM199Q8N511 208 aa23.91■■□□□ 1.42
TOP3A-218ENST00000584669 CDX2Q99626 313 aaPredicted RBP23.91■■□□□ 1.42
TOP3A-218ENST00000584669 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.91■■□□□ 1.425e-8■■■■□ 21.2
TOP3A-218ENST00000584669 TM6SF1Q9BZW5 370 aa23.91■■□□□ 1.42
TOP3A-218ENST00000584669 SEMA6BQ9H3T3 888 aa23.91■■□□□ 1.42
TOP3A-218ENST00000584669 CYP46A1Q9Y6A2 500 aa23.91■■□□□ 1.42
TOP3A-218ENST00000584669 DLL1O00548 723 aa23.9■■□□□ 1.42
TOP3A-218ENST00000584669 ACRP10323 421 aa23.9■■□□□ 1.42
TOP3A-218ENST00000584669 TXNP10599 105 aaKnown RBP23.9■■□□□ 1.42
TOP3A-218ENST00000584669 HEATR3Q7Z4Q2 680 aa23.9■■□□□ 1.42
TOP3A-218ENST00000584669 OR6J1Q8NGC5 347 aa23.9■■□□□ 1.42
TOP3A-218ENST00000584669 ZFP91Q96JP5 570 aaPredicted RBP23.9■■□□□ 1.42
TOP3A-218ENST00000584669 V9GY48 417 aaPredicted RBP23.9■■□□□ 1.42
TOP3A-218ENST00000584669 NID2Q14112 1375 aa23.9■■□□□ 1.42
TOP3A-218ENST00000584669 MEIS2O14770 477 aa23.89■■□□□ 1.41
TOP3A-218ENST00000584669 EIF3JO75822 258 aaKnown RBP23.89■■□□□ 1.41
TOP3A-218ENST00000584669 SEC24BO95487 1268 aa23.89■■□□□ 1.41
TOP3A-218ENST00000584669 CD4P01730 458 aa23.89■■□□□ 1.41
TOP3A-218ENST00000584669 MYL3P08590 195 aa23.89■■□□□ 1.41
TOP3A-218ENST00000584669 TTLL4Q14679 1199 aa23.89■■□□□ 1.41
TOP3A-218ENST00000584669 WWC2Q6AWC2 1192 aa23.89■■□□□ 1.41
TOP3A-218ENST00000584669 CCDC62Q6P9F0 684 aa23.89■■□□□ 1.41
TOP3A-218ENST00000584669 SLC43A3Q8NBI5 491 aa23.89■■□□□ 1.41
TOP3A-218ENST00000584669 SMARCC2Q8TAQ2 1214 aa23.89■■□□□ 1.41
TOP3A-218ENST00000584669 LARP6Q9BRS8 491 aaKnown RBP23.89■■□□□ 1.41
TOP3A-218ENST00000584669 TRPV6Q9H1D0 765 aa23.89■■□□□ 1.41
TOP3A-218ENST00000584669 TTYH1Q9H313 450 aaPredicted RBP23.89■■□□□ 1.41
TOP3A-218ENST00000584669 HIPK3Q9H422 1215 aa23.89■■□□□ 1.41
TOP3A-218ENST00000584669 COL6A3P12111 3177 aa23.89■■□□□ 1.41
TOP3A-218ENST00000584669 GRIN2DO15399 1336 aa23.88■■□□□ 1.41
TOP3A-218ENST00000584669 NKRFO15226 690 aaKnown RBP eCLIP23.88■■□□□ 1.41
TOP3A-218ENST00000584669 LY6KQ17RY6 165 aa23.88■■□□□ 1.41
TOP3A-218ENST00000584669 VSIG10LQ86VR7 867 aa23.88■■□□□ 1.41
TOP3A-218ENST00000584669 CUL5Q93034 780 aa23.88■■□□□ 1.41
TOP3A-218ENST00000584669 PSTPIP2Q9H939 334 aa23.88■■□□□ 1.41
TOP3A-218ENST00000584669 SCN10AQ9Y5Y9 1956 aa23.88■■□□□ 1.41
TOP3A-218ENST00000584669 FRMPD4Q14CM0 1322 aa23.87■■□□□ 1.41
TOP3A-218ENST00000584669 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.87■■□□□ 1.41
TOP3A-218ENST00000584669 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.87■■□□□ 1.41
TOP3A-218ENST00000584669 PIK3CDO00329 1044 aa23.87■■□□□ 1.41
TOP3A-218ENST00000584669 RGS20O76081 388 aa23.87■■□□□ 1.41
TOP3A-218ENST00000584669 PDIA3P30101 505 aaKnown RBP23.87■■□□□ 1.41
TOP3A-218ENST00000584669 EVCP57679 992 aa23.87■■□□□ 1.41
TOP3A-218ENST00000584669 UBE2SQ16763 222 aa23.87■■□□□ 1.41
TOP3A-218ENST00000584669 TMEM240Q5SV17 173 aa23.87■■□□□ 1.41
TOP3A-218ENST00000584669 TYW1BQ6NUM6 668 aa23.87■■□□□ 1.41
TOP3A-218ENST00000584669 MYLIPQ8WY64 445 aa23.87■■□□□ 1.41
TOP3A-218ENST00000584669 POLR3EQ9NVU0 708 aa23.87■■□□□ 1.41
TOP3A-218ENST00000584669 UMODL1Q5DID0 1318 aa23.86■■□□□ 1.41
TOP3A-218ENST00000584669 CCDC196A0A1B0GTZ2 297 aa23.86■■□□□ 1.41
TOP3A-218ENST00000584669 B4GALT4O60513 344 aa23.86■■□□□ 1.41
TOP3A-218ENST00000584669 CCND2P30279 289 aa23.86■■□□□ 1.41
TOP3A-218ENST00000584669 CPT1AP50416 773 aa23.86■■□□□ 1.41
TOP3A-218ENST00000584669 CCT2P78371 535 aaKnown RBP23.86■■□□□ 1.41
TOP3A-218ENST00000584669 BRDTQ58F21 947 aaPredicted RBP23.86■■□□□ 1.41
TOP3A-218ENST00000584669 PSRC1Q6PGN9 363 aaPredicted RBP23.86■■□□□ 1.41
TOP3A-218ENST00000584669 ZNF365Q70YC5 407 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms