RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 TCHHQ07283 1943 aa20.81■□□□□ 0.92
RFFL-211ENST00000584541 FOXN1O15353 648 aa20.81■□□□□ 0.92
RFFL-211ENST00000584541 EDNRBP24530 442 aa20.81■□□□□ 0.92
RFFL-211ENST00000584541 CTCFP49711 727 aaPredicted RBP20.81■□□□□ 0.92
RFFL-211ENST00000584541 ORC2Q13416 577 aaPredicted RBP20.81■□□□□ 0.92
RFFL-211ENST00000584541 FOXD4L6Q3SYB3 417 aaPredicted RBP20.81■□□□□ 0.92
RFFL-211ENST00000584541 FAM173BQ6P4H8 233 aa20.81■□□□□ 0.92
RFFL-211ENST00000584541 FOXD4L3Q6VB84 417 aaPredicted RBP20.81■□□□□ 0.92
RFFL-211ENST00000584541 VSIG10LQ86VR7 867 aa20.81■□□□□ 0.92
RFFL-211ENST00000584541 IL31RAQ8NI17 732 aa20.81■□□□□ 0.92
RFFL-211ENST00000584541 SYNGAP1Q96PV0 1343 aa20.8■□□□□ 0.92
RFFL-211ENST00000584541 EIF3JO75822 258 aaKnown RBP20.8■□□□□ 0.92
RFFL-211ENST00000584541 HSPA8P11142 646 aaKnown RBP20.8■□□□□ 0.92
RFFL-211ENST00000584541 CIITAP33076 1130 aa20.8■□□□□ 0.92
RFFL-211ENST00000584541 TOB1P50616 345 aaPredicted RBP20.8■□□□□ 0.92
RFFL-211ENST00000584541 IRF5Q13568 498 aa20.8■□□□□ 0.92
RFFL-211ENST00000584541 OLFML2BQ68BL8 750 aa20.8■□□□□ 0.92
RFFL-211ENST00000584541 PPP4R3AQ6IN85 833 aa20.8■□□□□ 0.92
RFFL-211ENST00000584541 MAMDC4Q6UXC1 1216 aa20.8■□□□□ 0.92
RFFL-211ENST00000584541 ARMCX2Q7L311 632 aa20.8■□□□□ 0.92
RFFL-211ENST00000584541 NLRX1Q86UT6 975 aa20.8■□□□□ 0.92
RFFL-211ENST00000584541 RAET1EQ8TD07 263 aa20.8■□□□□ 0.92
RFFL-211ENST00000584541 MORC4Q8TE76 937 aa20.8■□□□□ 0.92
RFFL-211ENST00000584541 TINF2Q9BSI4 451 aa20.8■□□□□ 0.92
RFFL-211ENST00000584541 CFAP45Q9UL16 551 aa20.8■□□□□ 0.92
RFFL-211ENST00000584541 CEP131Q9UPN4 1083 aa20.8■□□□□ 0.92
RFFL-211ENST00000584541 TRIM17Q9Y577 477 aa20.8■□□□□ 0.92
RFFL-211ENST00000584541 CYP3A7-CYP3A51PA0A087WV96 503 aa20.79■□□□□ 0.92
RFFL-211ENST00000584541 CYP3A7P24462 503 aa20.79■□□□□ 0.92
RFFL-211ENST00000584541 MCM7P33993 719 aa20.79■□□□□ 0.92
RFFL-211ENST00000584541 MRPS9P82933 396 aaKnown RBP20.79■□□□□ 0.92
RFFL-211ENST00000584541 SETQ01105 290 aaPredicted RBP20.79■□□□□ 0.92
RFFL-211ENST00000584541 CAP1Q01518 475 aa20.79■□□□□ 0.92
RFFL-211ENST00000584541 GNPTABQ3T906 1256 aa20.79■□□□□ 0.92
RFFL-211ENST00000584541 CEP55Q53EZ4 464 aa20.79■□□□□ 0.92
RFFL-211ENST00000584541 MXRA8Q9BRK3 442 aa20.79■□□□□ 0.92
RFFL-211ENST00000584541 RTEL1Q9NZ71 1219 aa20.79■□□□□ 0.92
RFFL-211ENST00000584541 DDX25Q9UHL0 483 aaKnown RBP20.79■□□□□ 0.92
RFFL-211ENST00000584541 TDP2O95551 362 aa20.78■□□□□ 0.92
RFFL-211ENST00000584541 BMP15O95972 392 aa20.78■□□□□ 0.92
RFFL-211ENST00000584541 NCLP19338 710 aaKnown RBP20.78■□□□□ 0.92
RFFL-211ENST00000584541 KRT85P78386 507 aa20.78■□□□□ 0.92
RFFL-211ENST00000584541 ZNF174Q15697 407 aa20.78■□□□□ 0.92
RFFL-211ENST00000584541 PRR16Q569H4 304 aa20.78■□□□□ 0.92
RFFL-211ENST00000584541 OTOP1Q7RTM1 612 aa20.78■□□□□ 0.92
RFFL-211ENST00000584541 NIPA1Q7RTP0 329 aa20.78■□□□□ 0.92
RFFL-211ENST00000584541 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.78■□□□□ 0.92
RFFL-211ENST00000584541 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.78■□□□□ 0.92
RFFL-211ENST00000584541 CNPY2Q9Y2B0 182 aa20.78■□□□□ 0.92
RFFL-211ENST00000584541 PCDHB6Q9Y5E3 794 aa20.78■□□□□ 0.92
RFFL-211ENST00000584541 UBIAD1Q9Y5Z9 338 aa20.78■□□□□ 0.92
RFFL-211ENST00000584541 MARCH6O60337 910 aa20.77■□□□□ 0.92
RFFL-211ENST00000584541 NEMFO60524 1076 aa20.77■□□□□ 0.92
RFFL-211ENST00000584541 DNM1Q05193 864 aaKnown RBP20.77■□□□□ 0.92
RFFL-211ENST00000584541 NBR1Q14596 966 aa20.77■□□□□ 0.92
RFFL-211ENST00000584541 Q4G0T1 1027 aa20.77■□□□□ 0.92
RFFL-211ENST00000584541 MFSD14CQ5VZR4 134 aa20.77■□□□□ 0.92
RFFL-211ENST00000584541 ANO1Q5XXA6 986 aa20.77■□□□□ 0.92
RFFL-211ENST00000584541 PLA2G4DQ86XP0 818 aa20.77■□□□□ 0.92
RFFL-211ENST00000584541 TNS4Q8IZW8 715 aa20.77■□□□□ 0.92
RFFL-211ENST00000584541 TNPO1Q92973 898 aaKnown RBP20.77■□□□□ 0.92
RFFL-211ENST00000584541 ZFP91Q96JP5 570 aaPredicted RBP20.77■□□□□ 0.92
RFFL-211ENST00000584541 CDHR1Q96JP9 859 aa20.77■□□□□ 0.92
RFFL-211ENST00000584541 MBOAT7Q96N66 472 aa20.77■□□□□ 0.92
RFFL-211ENST00000584541 VTA1Q9NP79 307 aa20.77■□□□□ 0.92
RFFL-211ENST00000584541 JADE2Q9NQC1 790 aa20.77■□□□□ 0.92
RFFL-211ENST00000584541 FAM86B1E9PN63 330 aa20.76■□□□□ 0.91
RFFL-211ENST00000584541 MEIS1O00470 390 aa20.76■□□□□ 0.91
RFFL-211ENST00000584541 MAFGO15525 162 aa20.76■□□□□ 0.91
RFFL-211ENST00000584541 EDIL3O43854 480 aa20.76■□□□□ 0.91
RFFL-211ENST00000584541 FAM86B2P0C5J1 330 aa20.76■□□□□ 0.91
RFFL-211ENST00000584541 ITGB5P18084 799 aa20.76■□□□□ 0.91
RFFL-211ENST00000584541 LBX1P52954 281 aa20.76■□□□□ 0.91
RFFL-211ENST00000584541 CEBPZQ03701 1054 aaKnown RBP20.76■□□□□ 0.91
RFFL-211ENST00000584541 MTMR1Q13613 665 aa20.76■□□□□ 0.91
RFFL-211ENST00000584541 SF3A1Q15459 793 aaKnown RBP20.76■□□□□ 0.91
RFFL-211ENST00000584541 CCL14Q16627 93 aa20.76■□□□□ 0.91
RFFL-211ENST00000584541 EEPD1Q7L9B9 569 aa20.76■□□□□ 0.91
RFFL-211ENST00000584541 GPRASP2Q96D09 838 aa20.76■□□□□ 0.91
RFFL-211ENST00000584541 INPP4AQ96PE3 977 aaPredicted RBP20.76■□□□□ 0.91
RFFL-211ENST00000584541 USP28Q96RU2 1077 aa20.76■□□□□ 0.91
RFFL-211ENST00000584541 ABHD16BQ9H3Z7 469 aa20.76■□□□□ 0.91
RFFL-211ENST00000584541 POLR3EQ9NVU0 708 aa20.76■□□□□ 0.91
RFFL-211ENST00000584541 FLRT1Q9NZU1 646 aa20.76■□□□□ 0.91
RFFL-211ENST00000584541 TFIP11Q9UBB9 837 aaKnown RBP20.76■□□□□ 0.91
RFFL-211ENST00000584541 DDX49Q9Y6V7 483 aaKnown RBP20.76■□□□□ 0.91
RFFL-211ENST00000584541 IGLV3-22A0A075B6J6 115 aa20.75■□□□□ 0.91
RFFL-211ENST00000584541 LAD1O00515 517 aa20.75■□□□□ 0.91
RFFL-211ENST00000584541 WNT7AO00755 349 aa20.75■□□□□ 0.91
RFFL-211ENST00000584541 FIBPO43427 364 aa20.75■□□□□ 0.91
RFFL-211ENST00000584541 ADCY3O60266 1144 aa20.75■□□□□ 0.91
RFFL-211ENST00000584541 BAG4O95429 457 aaKnown RBP20.75■□□□□ 0.91
RFFL-211ENST00000584541 STK38Q15208 465 aa20.75■□□□□ 0.91
RFFL-211ENST00000584541 CALCRLQ16602 461 aa20.75■□□□□ 0.91
RFFL-211ENST00000584541 KCNV1Q6PIU1 500 aa20.75■□□□□ 0.91
RFFL-211ENST00000584541 SEPT14Q6ZU15 432 aa20.75■□□□□ 0.91
RFFL-211ENST00000584541 PXYLP1Q8TE99 480 aa20.75■□□□□ 0.91
RFFL-211ENST00000584541 WDR11Q9BZH6 1224 aa20.75■□□□□ 0.91
RFFL-211ENST00000584541 CLIC4Q9Y696 253 aa20.75■□□□□ 0.91
RFFL-211ENST00000584541 SLC37A4O43826 429 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms