RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 HABP4Q5JVS0 413 aaKnown RBP31.26■■■□□ 2.59
SMARCD2-210ENST00000584400 PPP1R18Q6NYC8 613 aa31.26■■■□□ 2.59
SMARCD2-210ENST00000584400 GDF15Q99988 308 aa31.26■■■□□ 2.59
SMARCD2-210ENST00000584400 FAM217BQ9NTX9 383 aaPredicted RBP31.26■■■□□ 2.59
SMARCD2-210ENST00000584400 A0A1W2PPC1 479 aa31.25■■■□□ 2.59
SMARCD2-210ENST00000584400 MEIS2O14770 477 aa31.25■■■□□ 2.59
SMARCD2-210ENST00000584400 CLTBP09497 229 aa31.25■■■□□ 2.59
SMARCD2-210ENST00000584400 BMP8BP34820 402 aa31.25■■■□□ 2.59
SMARCD2-210ENST00000584400 ADD1P35611 737 aaKnown RBP31.25■■■□□ 2.59
SMARCD2-210ENST00000584400 GNPTABQ3T906 1256 aa31.25■■■□□ 2.59
SMARCD2-210ENST00000584400 XRRA1Q6P2D8 792 aa31.25■■■□□ 2.59
SMARCD2-210ENST00000584400 USP17L6PQ6QN14 398 aa31.25■■■□□ 2.59
SMARCD2-210ENST00000584400 NID2Q14112 1375 aa31.25■■■□□ 2.59
SMARCD2-210ENST00000584400 FRMPD4Q14CM0 1322 aa31.24■■■□□ 2.59
SMARCD2-210ENST00000584400 A6NJR5 290 aa31.24■■■□□ 2.59
SMARCD2-210ENST00000584400 ARIH2O95376 493 aa31.24■■■□□ 2.59
SMARCD2-210ENST00000584400 TGFB3P10600 412 aa31.24■■■□□ 2.59
SMARCD2-210ENST00000584400 MAGEA10P43363 369 aaPredicted RBP31.24■■■□□ 2.59
SMARCD2-210ENST00000584400 NAPAP54920 295 aa31.24■■■□□ 2.59
SMARCD2-210ENST00000584400 GLT8D2Q9H1C3 349 aa31.24■■■□□ 2.59
SMARCD2-210ENST00000584400 PRO3102Q9H379 93 aa31.24■■■□□ 2.59
SMARCD2-210ENST00000584400 DDX41Q9UJV9 622 aaKnown RBP31.24■■■□□ 2.59
SMARCD2-210ENST00000584400 SPDYE3A6NKU9 549 aa31.23■■■□□ 2.59
SMARCD2-210ENST00000584400 TLR3O15455 904 aaKnown RBP31.23■■■□□ 2.59
SMARCD2-210ENST00000584400 PTGS1P23219 599 aa31.23■■■□□ 2.59
SMARCD2-210ENST00000584400 CDK7P50613 346 aa31.23■■■□□ 2.59
SMARCD2-210ENST00000584400 AKAP17AQ02040 695 aaKnown RBP31.23■■■□□ 2.59
SMARCD2-210ENST00000584400 LY6KQ17RY6 165 aa31.23■■■□□ 2.59
SMARCD2-210ENST00000584400 GPKOWQ92917 476 aaPredicted RBP eCLIP31.23■■■□□ 2.59
SMARCD2-210ENST00000584400 UPF3BQ9BZI7 483 aaKnown RBP31.23■■■□□ 2.59
SMARCD2-210ENST00000584400 EHMT1Q9H9B1 1298 aa31.23■■■□□ 2.59
SMARCD2-210ENST00000584400 PDLIM7Q9NR12 457 aa31.23■■■□□ 2.59
SMARCD2-210ENST00000584400 PDRG1Q9NUG6 133 aa31.23■■■□□ 2.59
SMARCD2-210ENST00000584400 BAZ2BQ9UIF8 2168 aaKnown RBP31.22■■■□□ 2.59
SMARCD2-210ENST00000584400 MYL3P08590 195 aa31.22■■■□□ 2.59
SMARCD2-210ENST00000584400 ITGA7Q13683 1181 aa31.22■■■□□ 2.59
SMARCD2-210ENST00000584400 WWC2Q6AWC2 1192 aa31.22■■■□□ 2.59
SMARCD2-210ENST00000584400 COPS5Q92905 334 aa31.22■■■□□ 2.59
SMARCD2-210ENST00000584400 MTG1Q9BT17 334 aaPredicted RBP31.22■■■□□ 2.59
SMARCD2-210ENST00000584400 PDIA3P30101 505 aaKnown RBP31.21■■■□□ 2.59
SMARCD2-210ENST00000584400 LAMC2Q13753 1193 aa31.21■■■□□ 2.59
SMARCD2-210ENST00000584400 IL31RAQ8NI17 732 aa31.21■■■□□ 2.59
SMARCD2-210ENST00000584400 TMEM39AQ9NV64 488 aa31.21■■■□□ 2.59
SMARCD2-210ENST00000584400 BARHL2Q9NY43 387 aa31.21■■■□□ 2.59
SMARCD2-210ENST00000584400 PURAQ00577 322 aaKnown RBP31.2■■■□□ 2.59
SMARCD2-210ENST00000584400 TOB2Q14106 344 aaPredicted RBP31.2■■■□□ 2.59
SMARCD2-210ENST00000584400 PCNX4Q63HM2 1172 aa31.2■■■□□ 2.59
SMARCD2-210ENST00000584400 CCDC12Q8WUD4 166 aaPredicted RBP31.2■■■□□ 2.59
SMARCD2-210ENST00000584400 EMID1Q96A84 441 aaPredicted RBP31.2■■■□□ 2.59
SMARCD2-210ENST00000584400 ZNF274Q96GC6 653 aaPredicted RBP31.2■■■□□ 2.59
SMARCD2-210ENST00000584400 UBE2OQ9C0C9 1292 aaKnown RBP31.2■■■□□ 2.59
SMARCD2-210ENST00000584400 PRPF3O43395 683 aaKnown RBP31.19■■■□□ 2.58
SMARCD2-210ENST00000584400 MDM2Q00987 491 aaPredicted RBP31.19■■■□□ 2.58
SMARCD2-210ENST00000584400 ARHGAP1Q07960 439 aa31.19■■■□□ 2.58
SMARCD2-210ENST00000584400 PFKFB3Q16875 520 aaPredicted RBP31.19■■■□□ 2.58
SMARCD2-210ENST00000584400 DHX37Q8IY37 1157 aaKnown RBP31.19■■■□□ 2.58
SMARCD2-210ENST00000584400 SLC43A3Q8NBI5 491 aa31.19■■■□□ 2.58
SMARCD2-210ENST00000584400 RIC8AQ9NPQ8 531 aa31.19■■■□□ 2.58
SMARCD2-210ENST00000584400 KIAA0355O15063 1070 aa31.18■■■□□ 2.58
SMARCD2-210ENST00000584400 RGS20O76081 388 aa31.18■■■□□ 2.58
SMARCD2-210ENST00000584400 SCG2P13521 617 aa31.18■■■□□ 2.58
SMARCD2-210ENST00000584400 ADCY7P51828 1080 aa31.18■■■□□ 2.58
SMARCD2-210ENST00000584400 FAAP100Q0VG06 881 aa31.18■■■□□ 2.58
SMARCD2-210ENST00000584400 NLRX1Q86UT6 975 aa31.18■■■□□ 2.58
SMARCD2-210ENST00000584400 AFG1LQ8WV93 481 aa31.18■■■□□ 2.58
SMARCD2-210ENST00000584400 RNF26Q9BY78 433 aaPredicted RBP31.18■■■□□ 2.58
SMARCD2-210ENST00000584400 SMCO2A6NFE2 343 aa31.17■■■□□ 2.58
SMARCD2-210ENST00000584400 STXBP3O00186 592 aa31.17■■■□□ 2.58
SMARCD2-210ENST00000584400 FOSP01100 380 aaPredicted RBP31.17■■■□□ 2.58
SMARCD2-210ENST00000584400 RAG1P15918 1043 aa31.17■■■□□ 2.58
SMARCD2-210ENST00000584400 CPLX2Q6PUV4 134 aaKnown RBP31.17■■■□□ 2.58
SMARCD2-210ENST00000584400 FAM126BQ8IXS8 530 aa31.17■■■□□ 2.58
SMARCD2-210ENST00000584400 INPP4AQ96PE3 977 aaPredicted RBP31.17■■■□□ 2.58
SMARCD2-210ENST00000584400 CPLX1O14810 134 aa31.16■■■□□ 2.58
SMARCD2-210ENST00000584400 FIBPO43427 364 aa31.16■■■□□ 2.58
SMARCD2-210ENST00000584400 MMP3P08254 477 aa31.16■■■□□ 2.58
SMARCD2-210ENST00000584400 IFNAR1P17181 557 aa31.16■■■□□ 2.58
SMARCD2-210ENST00000584400 ICAM3P32942 547 aa31.16■■■□□ 2.58
SMARCD2-210ENST00000584400 CCT2P78371 535 aaKnown RBP31.16■■■□□ 2.58
SMARCD2-210ENST00000584400 MRPS9P82933 396 aaKnown RBP31.16■■■□□ 2.58
SMARCD2-210ENST00000584400 ANKRD1Q15327 319 aa31.16■■■□□ 2.58
SMARCD2-210ENST00000584400 DGKDQ16760 1214 aa31.16■■■□□ 2.58
SMARCD2-210ENST00000584400 UBE2SQ16763 222 aa31.16■■■□□ 2.58
SMARCD2-210ENST00000584400 SH3RF1Q7Z6J0 888 aa31.16■■■□□ 2.58
SMARCD2-210ENST00000584400 PCDHA6Q9UN73 950 aa31.16■■■□□ 2.58
SMARCD2-210ENST00000584400 PCDHA8Q9Y5H6 950 aa31.16■■■□□ 2.58
SMARCD2-210ENST00000584400 TRIM43BA6NCK2 446 aa31.15■■■□□ 2.58
SMARCD2-210ENST00000584400 PSMC6P62333 389 aa31.15■■■□□ 2.58
SMARCD2-210ENST00000584400 NEDD9Q14511 834 aa31.15■■■□□ 2.58
SMARCD2-210ENST00000584400 CELF3Q5SZQ8 465 aaKnown RBP31.15■■■□□ 2.58
SMARCD2-210ENST00000584400 TRIM22Q8IYM9 498 aa31.15■■■□□ 2.58
SMARCD2-210ENST00000584400 PPTC7Q8NI37 304 aa31.15■■■□□ 2.58
SMARCD2-210ENST00000584400 TRIM43Q96BQ3 446 aaPredicted RBP31.15■■■□□ 2.58
SMARCD2-210ENST00000584400 CDHR1Q96JP9 859 aa31.15■■■□□ 2.58
SMARCD2-210ENST00000584400 ALDH8A1Q9H2A2 487 aaPredicted RBP31.15■■■□□ 2.58
SMARCD2-210ENST00000584400 MLXIPQ9HAP2 919 aa31.15■■■□□ 2.58
SMARCD2-210ENST00000584400 RTEL1Q9NZ71 1219 aa31.15■■■□□ 2.58
SMARCD2-210ENST00000584400 NTRK3Q16288 839 aa31.14■■■□□ 2.58
SMARCD2-210ENST00000584400 TYW1BQ6NUM6 668 aa31.14■■■□□ 2.58
SMARCD2-210ENST00000584400 GGPS1O95749 300 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms