RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 PFKMP08237 780 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 ACTN1P12814 892 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 STAT2P52630 851 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 COL9A3Q14050 684 aaPredicted RBP13.13□□□□□ -0.31
CCDC47-206ENST00000584112 ZNF792Q3KQV3 632 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 GNASQ5JWF2 1037 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 VPS53Q5VIR6 699 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 FAM160B2Q86V87 743 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 CPXCR1Q8N123 301 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 MSL3Q8N5Y2 521 aaKnown RBP13.13□□□□□ -0.31
CCDC47-206ENST00000584112 PCSK9Q8NBP7 692 aaKnown RBP13.13□□□□□ -0.31
CCDC47-206ENST00000584112 BANK1Q8NDB2 785 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 EXOC6Q8TAG9 804 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 CHURC1Q8WUH1 139 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 RILPL2Q969X0 211 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 DDX11Q96FC9 970 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 GMCL1Q96IK5 515 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 FAM227BQ96M60 508 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 C17orf80Q9BSJ5 609 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 OSBPL3Q9H4L5 887 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 SLC38A10Q9HBR0 1119 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 FBXO40Q9UH90 709 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 ISY1Q9ULR0 285 aaKnown RBP13.13□□□□□ -0.31
CCDC47-206ENST00000584112 STX8Q9UNK0 236 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 LCTP09848 1927 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 CCDC171Q6TFL3 1326 aa13.13□□□□□ -0.31
CCDC47-206ENST00000584112 TMEM232C9JQI7 657 aa13.12□□□□□ -0.31
CCDC47-206ENST00000584112 FGAP02671 866 aa13.12□□□□□ -0.31
CCDC47-206ENST00000584112 CYP2C9P11712 490 aa13.12□□□□□ -0.31
CCDC47-206ENST00000584112 SLC1A4P43007 532 aa13.12□□□□□ -0.31
CCDC47-206ENST00000584112 BEX3Q00994 111 aa13.12□□□□□ -0.31
CCDC47-206ENST00000584112 NUCB1Q02818 461 aa13.12□□□□□ -0.31
CCDC47-206ENST00000584112 IKQ13123 557 aaPredicted RBP13.12□□□□□ -0.31
CCDC47-206ENST00000584112 NMIQ13287 307 aaPredicted RBP13.12□□□□□ -0.31
CCDC47-206ENST00000584112 CXCL17Q6UXB2 119 aa13.12□□□□□ -0.31
CCDC47-206ENST00000584112 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCDC47-206ENST00000584112 CHST13Q8NET6 341 aa13.12□□□□□ -0.31
CCDC47-206ENST00000584112 FBXO22Q8NEZ5 403 aa13.12□□□□□ -0.31
CCDC47-206ENST00000584112 ZBED2Q9BTP6 218 aa13.12□□□□□ -0.31
CCDC47-206ENST00000584112 TOMM22Q9NS69 142 aa13.12□□□□□ -0.31
CCDC47-206ENST00000584112 FAM184BQ9ULE4 1060 aa13.12□□□□□ -0.31
CCDC47-206ENST00000584112 CNPY2Q9Y2B0 182 aa13.12□□□□□ -0.31
CCDC47-206ENST00000584112 CTAGE5O15320 804 aa13.11□□□□□ -0.31
CCDC47-206ENST00000584112 PLA2G6O60733 806 aa13.11□□□□□ -0.31
CCDC47-206ENST00000584112 DUSP11O75319 330 aaKnown RBP13.11□□□□□ -0.31
CCDC47-206ENST00000584112 IGHDP01880 384 aa13.11□□□□□ -0.31
CCDC47-206ENST00000584112 FGRP09769 529 aa13.11□□□□□ -0.31
CCDC47-206ENST00000584112 HSPD1P10809 573 aaKnown RBP13.11□□□□□ -0.31
CCDC47-206ENST00000584112 PCP11498 1178 aaKnown RBP13.11□□□□□ -0.31
CCDC47-206ENST00000584112 SLC4A3P48751 1232 aa13.11□□□□□ -0.31
CCDC47-206ENST00000584112 PLEKHM2Q8IWE5 1019 aa13.11□□□□□ -0.31
CCDC47-206ENST00000584112 STAG1Q8WVM7 1258 aa13.11□□□□□ -0.31
CCDC47-206ENST00000584112 RIPOR3Q96MK2 946 aa13.11□□□□□ -0.31
CCDC47-206ENST00000584112 FTOQ9C0B1 505 aaKnown RBP eCLIP13.11□□□□□ -0.31
CCDC47-206ENST00000584112 RAVER2Q9HCJ3 691 aaKnown RBP13.11□□□□□ -0.31
CCDC47-206ENST00000584112 IL17RBQ9NRM6 502 aa13.11□□□□□ -0.31
CCDC47-206ENST00000584112 ZHX1Q9UKY1 873 aaPredicted RBP13.11□□□□□ -0.31
CCDC47-206ENST00000584112 RIPK3Q9Y572 518 aa13.11□□□□□ -0.31
CCDC47-206ENST00000584112 CYSRT1A8MQ03 144 aa13.1□□□□□ -0.31
CCDC47-206ENST00000584112 LOC730098B7Z3J9 87 aa13.1□□□□□ -0.31
CCDC47-206ENST00000584112 HIP1O00291 1037 aa13.1□□□□□ -0.31
CCDC47-206ENST00000584112 MCCP23508 829 aa13.1□□□□□ -0.31
CCDC47-206ENST00000584112 DEFB103AP81534 67 aa13.1□□□□□ -0.31
CCDC47-206ENST00000584112 SMAD4Q13485 552 aaKnown RBP13.1□□□□□ -0.31
CCDC47-206ENST00000584112 ITGA7Q13683 1181 aa13.1□□□□□ -0.31
CCDC47-206ENST00000584112 TIGD5Q53EQ6 642 aa13.1□□□□□ -0.31
CCDC47-206ENST00000584112 RRP12Q5JTH9 1297 aaKnown RBP13.1□□□□□ -0.31
CCDC47-206ENST00000584112 RCSD1Q6JBY9 416 aa13.1□□□□□ -0.31
CCDC47-206ENST00000584112 ZNF467Q7Z7K2 595 aaPredicted RBP13.1□□□□□ -0.31
CCDC47-206ENST00000584112 ZNF589Q86UQ0 364 aaPredicted RBP13.1□□□□□ -0.31
CCDC47-206ENST00000584112 ANKRD35Q8N283 1001 aa13.1□□□□□ -0.31
CCDC47-206ENST00000584112 DCLK2Q8N568 766 aa13.1□□□□□ -0.31
CCDC47-206ENST00000584112 UPF3AQ9H1J1 476 aaKnown RBP13.1□□□□□ -0.31
CCDC47-206ENST00000584112 INCENPQ9NQS7 918 aa13.1□□□□□ -0.31
CCDC47-206ENST00000584112 PCDHGC5Q9Y5F6 944 aa13.1□□□□□ -0.31
CCDC47-206ENST00000584112 DNAJC25-GNG10A0A024R161 153 aa13.09□□□□□ -0.31
CCDC47-206ENST00000584112 SDSP20132 328 aa13.09□□□□□ -0.31
CCDC47-206ENST00000584112 NOVP48745 357 aa13.09□□□□□ -0.31
CCDC47-206ENST00000584112 TKFCQ3LXA3 575 aa13.09□□□□□ -0.31
CCDC47-206ENST00000584112 MAMDC4Q6UXC1 1216 aa13.09□□□□□ -0.31
CCDC47-206ENST00000584112 DCAF4Q8WV16 495 aa13.09□□□□□ -0.31
CCDC47-206ENST00000584112 HINFPQ9BQA5 517 aa13.09□□□□□ -0.31
CCDC47-206ENST00000584112 RNF41Q9H4P4 317 aaPredicted RBP13.09□□□□□ -0.31
CCDC47-206ENST00000584112 IGSF5Q9NSI5 407 aa13.09□□□□□ -0.31
CCDC47-206ENST00000584112 DIAPH3Q9NSV4 1193 aa13.09□□□□□ -0.31
CCDC47-206ENST00000584112 TCP11L1Q9NUJ3 509 aa13.09□□□□□ -0.31
CCDC47-206ENST00000584112 TNKSO95271 1327 aa13.09□□□□□ -0.31
CCDC47-206ENST00000584112 BPTFQ12830 3046 aa13.08□□□□□ -0.32
CCDC47-206ENST00000584112 SOBPA7XYQ1 873 aa13.08□□□□□ -0.32
CCDC47-206ENST00000584112 NMT2O60551 498 aa13.08□□□□□ -0.32
CCDC47-206ENST00000584112 SNAI1O95863 264 aaPredicted RBP13.08□□□□□ -0.32
CCDC47-206ENST00000584112 ARP10275 920 aa13.08□□□□□ -0.32
CCDC47-206ENST00000584112 TOP1P11387 765 aaKnown RBP13.08□□□□□ -0.32
CCDC47-206ENST00000584112 KCNJ6P48051 423 aa13.08□□□□□ -0.32
CCDC47-206ENST00000584112 NT5C2P49902 561 aa13.08□□□□□ -0.32
CCDC47-206ENST00000584112 GJA9P57773 515 aa13.08□□□□□ -0.32
CCDC47-206ENST00000584112 WDR5P61964 334 aaKnown RBP13.08□□□□□ -0.32
CCDC47-206ENST00000584112 PSMC6P62333 389 aa13.08□□□□□ -0.32
CCDC47-206ENST00000584112 CCDC96Q2M329 555 aa13.08□□□□□ -0.32
CCDC47-206ENST00000584112 FAM117BQ6P1L5 589 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms